Exceptional subgenome stability and functional divergence in the allotetraploid Ethiopian cereal teff

VanBuren, Robert; Man Wai, Ching; Wang, Xuewen; Pardo, Jeremy; Yocca, Alan E.; Wang, Hao; Chaluvadi, Srinivasa R.; Han, Guomin; Bryant, Douglas; Edger, Patrick P.; Messing, Joachim; Sorrells, Mark E.; Mockler, Todd C.; Bennetzen, Jeffrey L.; Michael, Todd P.

doi:10.1038/s41467-020-14724-z

Title: Exceptional subgenome stability and functional divergence in the allotetraploid Ethiopian cereal teff

Journal Article · Fri Feb 14 00:00:00 EST 2020 · Nature Communications

DOI:https://doi.org/10.1038/s41467-020-14724-z· OSTI ID:1629986

VanBuren, Robert ^[1];

^[1]; Wang, Xuewen ^[2];

^[3];

^[4]; Wang, Hao ^[2]; Chaluvadi, Srinivasa R. ^[2];

^[2]; Bryant, Douglas ^[5];

^[6];

^[7]; Sorrells, Mark E. ^[8];

^[5];

^[2];

^[9]

Michigan State Univ., East Lansing, MI (United States). Dept. of Horticulture; Michigan State Univ., East Lansing, MI (United States). Plant Resilience Inst.
Univ. of Georgia, Athens, GA (United States). Dept. of Genetics
Michigan State Univ., East Lansing, MI (United States). Dept. of Horticulture; Michigan State Univ., East Lansing, MI (United States). Plant Resilience Inst.; Michigan State Univ., East Lansing, MI (United States). Dept. of Plant Biology
Michigan State Univ., East Lansing, MI (United States). Dept. of Horticulture; Michigan State Univ., East Lansing, MI (United States). Dept. of Plant Biology
Donald Danforth Plant Science Center, St. Louis, MO (United States)
Michigan State Univ., East Lansing, MI (United States). Dept. of Horticulture
Rutgers Univ., New Brunswick, NJ (United States). Waksman Inst. of Microbiology
Cornell Univ., Ithaca, NY (United States). Dept. of Plant Breeding and Genetics
J. Craig Venter Institute, La Jolla, CA (United States)

Teff (Eragrostis tef) is a cornerstone of food security in the Horn of Africa, where it is prized for stress resilience, grain nutrition, and market value. Here, we report a chromosome-scale assembly of allotetraploid teff (variety Dabbi) and patterns of subgenome dynamics. The teff genome contains two complete sets of homoeologous chromosomes, with most genes maintaining as syntenic gene pairs. TE analysis allows us to estimate that the teff polyploidy event occurred ~1.1 million years ago (mya) and that the two subgenomes diverged ~5.0 mya. Despite this divergence, we detect no large-scale structural rearrangements, homoeologous exchanges, or biased gene loss, in contrast to many other allopolyploids. The two teff subgenomes have partitioned their ancestral functions based on divergent expression across a diverse expression atlas. Together, these genomic resources will be useful for accelerating breeding of this underutilized grain crop and for fundamental insights into polyploid genome evolution.

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Research Organization:: J. Craig Venter Institute, La Jolla, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER). Biological Systems Science Division

Grant/Contract Number:: SC0012639

OSTI ID:: 1629986

Journal Information:: Nature Communications, Vol. 11, Issue 1; ISSN 2041-1723

Publisher:: Nature Publishing GroupCopyright Statement

Country of Publication:: United States

Language:: English

References (78)

Growing the lost crops of eastern North America's original agricultural system Mueller, Natalie G.; Fritz, Gayle J.; Patton, Paul Nature Plants, Vol. 3, Issue 7 https://doi.org/10.1038/nplants.2017.92	journal	July 2017
Increasing homogeneity in global food supplies and the implications for food security Khoury, C. K.; Bjorkman, A. D.; Dempewolf, H. Proceedings of the National Academy of Sciences, Vol. 111, Issue 11 https://doi.org/10.1073/pnas.1313490111	journal	March 2014
T’ef (Eragrostis tef) in Ancient Agricultural Systems of Highland Ethiopia D’Andrea, A. C. Economic Botany, Vol. 62, Issue 4 https://doi.org/10.1007/s12231-008-9053-4	journal	November 2008
The system of crop intensification: reports from the field on improving agricultural production, food security, and resilience to climate change for multiple crops Abraham, Binju; Araya, Hailu; Berhe, Tareke Agriculture & Food Security, Vol. 3, Issue 1 https://doi.org/10.1186/2048-7010-3-4	journal	January 2014
Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef) Cannarozzi, Gina; Plaza-Wüthrich, Sonia; Esfeld, Korinna BMC Genomics, Vol. 15, Issue 1 https://doi.org/10.1186/1471-2164-15-581	journal	January 2014
The origin and evolution of Eragrostis tef (Poaceae) and related polyploids: evidence from nuclear waxy and plastid rps16 Ingram, Amanda L.; Doyle, Jeff J. American Journal of Botany, Vol. 90, Issue 1 https://doi.org/10.3732/ajb.90.1.116	journal	January 2003
Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres Paterson, Andrew H.; Wendel, Jonathan F.; Gundlach, Heidrun Nature, Vol. 492, Issue 7429 https://doi.org/10.1038/nature11798	journal	December 2012
The contribution of polyploidy to variation in Brassica species Osborn, Thomas C. Physiologia Plantarum, Vol. 121, Issue 4 https://doi.org/10.1111/j.1399-3054.2004.00360.x	journal	August 2004
Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants Freeling, Michael; Woodhouse, Margaret R.; Subramaniam, Shabarinath Current Opinion in Plant Biology, Vol. 15, Issue 2 https://doi.org/10.1016/j.pbi.2012.01.015	journal	April 2012
Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome Chalhoub, B.; Denoeud, F.; Liu, S. Science, Vol. 345, Issue 6199 https://doi.org/10.1126/science.1253435	journal	August 2014
Origin and evolution of the octoploid strawberry genome Edger, Patrick P.; Poorten, Thomas J.; VanBuren, Robert Nature Genetics, Vol. 51, Issue 3 https://doi.org/10.1038/s41588-019-0356-4	journal	February 2019
Chromosome studies in the grass subfamily Chloridoideae. II. An analysis of polyploidy Roodt, Rouvay; Spies, Johan J. TAXON, Vol. 52, Issue 4 https://doi.org/10.2307/4135546	journal	November 2003
Canu: scalable and accurate long-read assembly via adaptive k -mer weighting and repeat separation Koren, Sergey; Walenz, Brian P.; Berlin, Konstantin Genome Research, Vol. 27, Issue 5 https://doi.org/10.1101/gr.215087.116	journal	March 2017
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement Walker, Bruce J.; Abeel, Thomas; Shea, Terrance PLoS ONE, Vol. 9, Issue 11 https://doi.org/10.1371/journal.pone.0112963	journal	November 2014
A genetic linkage map for tef [Eragrostis tef (Zucc.) Trotter] Yu, Ju-Kyung; Kantety, Ramesh V.; Graznak, Elizabeth Theoretical and Applied Genetics, Vol. 113, Issue 6 https://doi.org/10.1007/s00122-006-0369-0	journal	August 2006
Identification and characterization of abundant repetitive sequences in Eragrostis tef cv. Enatite genome Gebre, Yohannes Gedamu; Bertolini, Edoardo; Pè, Mario Enrico BMC Plant Biology, Vol. 16, Issue 1 https://doi.org/10.1186/s12870-016-0725-4	journal	February 2016
Dating the origins of polyploidy events Doyle, Jeff J.; Egan, Ashley N. New Phytologist, Vol. 186, Issue 1 https://doi.org/10.1111/j.1469-8137.2009.03118.x	journal	December 2009
The paleontology of intergene retrotransposons of maize SanMiguel, Phillip; Gaut, Brandon S.; Tikhonov, Alexander Nature Genetics, Vol. 20, Issue 1 https://doi.org/10.1038/1695	journal	September 1998
A chromosome-scale assembly of the model desiccation tolerant grass Oropetium thomaeum VanBuren, Robert; Wai, Ching Man; Keilwagen, Jens Plant Direct, Vol. 2, Issue 11 https://doi.org/10.1002/pld3.96	journal	November 2018
Genome sequencing and analysis of the model grass Brachypodium distachyon Nature, Vol. 463, Issue 7282, p. 763-768 https://doi.org/10.1038/nature08747	journal	February 2010
Genome and Transcriptome sequence of Finger millet (Eleusine coracana (L.) Gaertn.) provides insights into drought tolerance and nutraceutical properties Hittalmani, Shailaja; Mahesh, H. B.; Shirke, Meghana Deepak BMC Genomics, Vol. 18, Issue 1 https://doi.org/10.1186/s12864-017-3850-z	journal	June 2017
Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes Thomas, B. C. Genome Research, Vol. 16, Issue 7 https://doi.org/10.1101/gr.4708406	journal	July 2006
Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss Schnable, J. C.; Springer, N. M.; Freeling, M. Proceedings of the National Academy of Sciences, Vol. 108, Issue 10 https://doi.org/10.1073/pnas.1101368108	journal	February 2011
The genome of the mesopolyploid crop species Brassica rapa Wang, Xiaowu; Wang, Hanzhong; Wang, Jun Nature Genetics, Vol. 43, Issue 10 https://doi.org/10.1038/ng.919	journal	August 2011
mRNA and Small RNA Transcriptomes Reveal Insights into Dynamic Homoeolog Regulation of Allopolyploid Heterosis in Nascent Hexaploid Wheat Li, Aili; Liu, Dengcai; Wu, Jun The Plant Cell, Vol. 26, Issue 5 https://doi.org/10.1105/tpc.114.124388	journal	May 2014
Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris Douglas, Gavin M.; Gos, Gesseca; Steige, Kim A. Proceedings of the National Academy of Sciences, Vol. 112, Issue 9 https://doi.org/10.1073/pnas.1412277112	journal	February 2015
Karyotype Stability and Unbiased Fractionation in the Paleo-Allotetraploid Cucurbita Genomes Sun, Honghe; Wu, Shan; Zhang, Guoyu Molecular Plant, Vol. 10, Issue 10 https://doi.org/10.1016/j.molp.2017.09.003	journal	October 2017
Teff, an Orphan Cereal in the Chloridoideae , Provides Insights into the Evolution of Storage Proteins in Grasses Zhang, Wei; Xu, Jianhong; Bennetzen, Jeffrey L. Genome Biology and Evolution, Vol. 8, Issue 6 https://doi.org/10.1093/gbe/evw117	journal	May 2016
The transcriptional landscape of polyploid wheat Ramírez-González, R. H.; Borrill, P.; Lang, D. Science, Vol. 361, Issue 6403 https://doi.org/10.1126/science.aar6089	journal	August 2018
Tissue-specific silencing of homoeologs in natural populations of the recent allopolyploid Tragopogon mirus Buggs, Richard J. A.; Elliott, Natalie M.; Zhang, Linjing New Phytologist, Vol. 186, Issue 1 https://doi.org/10.1111/j.1469-8137.2010.03205.x	journal	March 2010
Reference genome sequences of two cultivated allotetraploid cottons, Gossypium hirsutum and Gossypium barbadense Wang, Maojun; Tu, Lili; Yuan, Daojun Nature Genetics, Vol. 51, Issue 2 https://doi.org/10.1038/s41588-018-0282-x	journal	December 2018
Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton Hu, Yan; Chen, Jiedan; Fang, Lei Nature Genetics, Vol. 51, Issue 4 https://doi.org/10.1038/s41588-019-0371-5	journal	March 2019
Musa balbisiana genome reveals subgenome evolution and functional divergence Wang, Zhuo; Miao, Hongxia; Liu, Juhua Nature Plants, Vol. 5, Issue 8 https://doi.org/10.1038/s41477-019-0452-6	journal	July 2019
Homoeologous recombination in allopolyploids: the polyploid ratchet: Research review Gaeta, Robert T.; Chris Pires, J. New Phytologist, Vol. 186, Issue 1 https://doi.org/10.1111/j.1469-8137.2009.03089.x	journal	December 2009
Recently Formed Polyploid Plants Diversify at Lower Rates Mayrose, I.; Zhan, S. H.; Rothfels, C. J. Science, Vol. 333, Issue 6047 https://doi.org/10.1126/science.1207205	journal	August 2011
Oligocene CO2 Decline Promoted C4 Photosynthesis in Grasses Christin, Pascal-Antoine; Besnard, Guillaume; Samaritani, Emanuela Current Biology, Vol. 18, Issue 1 https://doi.org/10.1016/j.cub.2007.11.058	journal	January 2008
The age of the grasses and clusters of origins of C ₄ photosynthesis Vicentini, Alberto; Barber, Janet C.; Aliscioni, Sandra S. Global Change Biology, Vol. 14, Issue 12 https://doi.org/10.1111/j.1365-2486.2008.01688.x	journal	December 2008
Genetic Control of the Cytologically Diploid Behaviour of Hexaploid Wheat Riley, Ralph; Chapman, Victor Nature, Vol. 182, Issue 4637 https://doi.org/10.1038/182713a0	journal	September 1958
High-Throughput Discovery of Mutations in Tef Semi-Dwarfing Genes by Next-Generation Sequencing Analysis Zhu, Qihui; Smith, Shavannor M.; Ayele, Mulu Genetics, Vol. 192, Issue 3 https://doi.org/10.1534/genetics.112.144436	journal	August 2012
Preparation of megabase-size DNA from plant nuclei Zhang, Hong-Bin; Zhao, Xinping; Ding, Xiaoling The Plant Journal, Vol. 7, Issue 1 https://doi.org/10.1046/j.1365-313X.1995.07010175.x	journal	January 1995
Bandage: interactive visualization of de novo genome assemblies: Fig. 1. Wick, Ryan R.; Schultz, Mark B.; Zobel, Justin Bioinformatics, Vol. 31, Issue 20 https://doi.org/10.1093/bioinformatics/btv383	journal	June 2015
Trimmomatic: a flexible trimmer for Illumina sequence data Bolger, Anthony M.; Lohse, Marc; Usadel, Bjoern Bioinformatics, Vol. 30, Issue 15 https://doi.org/10.1093/bioinformatics/btu170	journal	April 2014
Fast gapped-read alignment with Bowtie 2 Langmead, Ben; Salzberg, Steven L. Nature Methods, Vol. 9, Issue 4 https://doi.org/10.1038/nmeth.1923	journal	March 2012
TASSEL-GBS: A High Capacity Genotyping by Sequencing Analysis Pipeline Glaubitz, Jeffrey C.; Casstevens, Terry M.; Lu, Fei PLoS ONE, Vol. 9, Issue 2 https://doi.org/10.1371/journal.pone.0090346	journal	February 2014
Construction of integrated genetic linkage maps by means of a new computer package: Join Map Stam, Piet The Plant Journal, Vol. 3, Issue 5 https://doi.org/10.1111/j.1365-313X.1993.00739.x	journal	May 1993
MAPMAKER: An interactive computer package for constructing primary genetic linkage maps of experimental and natural populations Lander, Eric S.; Green, Philip; Abrahamson, Jeff Genomics, Vol. 1, Issue 2 https://doi.org/10.1016/0888-7543(87)90010-3	journal	October 1987
Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments Durand, Neva C.; Shamim, Muhammad S.; Machol, Ido Cell Systems, Vol. 3, Issue 1 https://doi.org/10.1016/j.cels.2016.07.002	journal	July 2016
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds Dudchenko, Olga; Batra, Sanjit S.; Omer, Arina D. Science, Vol. 356, Issue 6333 https://doi.org/10.1126/science.aal3327	journal	March 2017
ALLMAPS: robust scaffold ordering based on multiple maps Tang, Haibao; Zhang, Xingtan; Miao, Chenyong Genome Biology, Vol. 16, Issue 1 https://doi.org/10.1186/s13059-014-0573-1	journal	January 2015
LTR_retriever: A Highly Accurate and Sensitive Program for Identification of Long Terminal Repeat Retrotransposons Ou, Shujun; Jiang, Ning Plant Physiology, Vol. 176, Issue 2 https://doi.org/10.1104/pp.17.01310	journal	December 2017
Targeted Identification of Short Interspersed Nuclear Element Families Shows Their Widespread Existence and Extreme Heterogeneity in Plant Genomes Wenke, Torsten; Döbel, Thomas; Sörensen, Thomas Rosleff The Plant Cell, Vol. 23, Issue 9 https://doi.org/10.1105/tpc.111.088682	journal	September 2011
MGEScan-non-LTR: computational identification and classification of autonomous non-LTR retrotransposons in eukaryotic genomes Rho, M.; Tang, H. Nucleic Acids Research, Vol. 37, Issue 21 https://doi.org/10.1093/nar/gkp752	journal	September 2009
MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences Han, Y.; Wessler, S. R. Nucleic Acids Research, Vol. 38, Issue 22 https://doi.org/10.1093/nar/gkq862	journal	September 2010
MITE Tracker: an accurate approach to identify miniature inverted-repeat transposable elements in large genomes Crescente, Juan Manuel; Zavallo, Diego; Helguera, Marcelo BMC Bioinformatics, Vol. 19, Issue 1 https://doi.org/10.1186/s12859-018-2376-y	journal	October 2018
HelitronScanner uncovers a large overlooked cache of Helitron transposons in many plant genomes Xiong, W.; He, L.; Lai, J. Proceedings of the National Academy of Sciences, Vol. 111, Issue 28 https://doi.org/10.1073/pnas.1410068111	journal	June 2014
A unified classification system for eukaryotic transposable elements Wicker, Thomas; Sabot, François; Hua-Van, Aurélie Nature Reviews Genetics, Vol. 8, Issue 12 https://doi.org/10.1038/nrg2165	journal	December 2007
Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution Melters, Daniël P.; Bradnam, Keith R.; Young, Hugh A. Genome Biology, Vol. 14, Issue 1 https://doi.org/10.1186/gb-2013-14-1-r10	journal	January 2013
Tandem repeats finder: a program to analyze DNA sequences Benson, G. Nucleic Acids Research, Vol. 27, Issue 2 https://doi.org/10.1093/nar/27.2.573	journal	January 1999
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods Tamura, K.; Peterson, D.; Peterson, N. Molecular Biology and Evolution, Vol. 28, Issue 10 https://doi.org/10.1093/molbev/msr121	journal	May 2011
MAKER-P: A Tool Kit for the Rapid Creation, Management, and Quality Control of Plant Genome Annotations Campbell, Michael S.; Law, MeiYee; Holt, Carson Plant Physiology, Vol. 164, Issue 2 https://doi.org/10.1104/pp.113.230144	journal	December 2013
STAR: ultrafast universal RNA-seq aligner Dobin, Alexander; Davis, Carrie A.; Schlesinger, Felix Bioinformatics, Vol. 29, Issue 1 https://doi.org/10.1093/bioinformatics/bts635	journal	October 2012
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads Pertea, Mihaela; Pertea, Geo M.; Antonescu, Corina M. Nature Biotechnology, Vol. 33, Issue 3 https://doi.org/10.1038/nbt.3122	journal	February 2015
Gene finding in novel genomes Korf, Ian BMC Bioinformatics, Vol. 5, Issue 1 https://doi.org/10.1186/1471-2105-5-59	journal	May 2004
Gene prediction with a hidden Markov model and a new intron submodel Stanke, M.; Waack, S. Bioinformatics, Vol. 19, Issue Suppl 2 https://doi.org/10.1093/bioinformatics/btg1080	journal	September 2003
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs Simão, Felipe A.; Waterhouse, Robert M.; Ioannidis, Panagiotis Bioinformatics, Vol. 31, Issue 19 https://doi.org/10.1093/bioinformatics/btv351	journal	June 2015
Near-optimal probabilistic RNA-seq quantification Bray, Nicolas L.; Pimentel, Harold; Melsted, Páll Nature Biotechnology, Vol. 34, Issue 5 https://doi.org/10.1038/nbt.3519	journal	April 2016
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 Love, Michael I.; Huber, Wolfgang; Anders, Simon Genome Biology, Vol. 15, Issue 12 https://doi.org/10.1186/s13059-014-0550-8	journal	December 2014
MUSCLE: multiple sequence alignment with high accuracy and high throughput Edgar, R. C. Nucleic Acids Research, Vol. 32, Issue 5, p. 1792-1797 https://doi.org/10.1093/nar/gkh340	journal	March 2004
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments Suyama, M.; Torrents, D.; Bork, P. Nucleic Acids Research, Vol. 34, Issue Web Server https://doi.org/10.1093/nar/gkl315	journal	July 2006
Estimation of nuclear DNA content of plants by flow cytometry Arumuganathan, K.; Earle, E. D. Plant Molecular Biology Reporter, Vol. 9, Issue 3 https://doi.org/10.1007/bf02672073	journal	August 1991
Genome-wide identification, structural analysis and expression profiles of GRAS gene family in orchardgrass Xu, Xiaoheng; Feng, Guangyan; Huang, Linkai Molecular Biology Reports, Vol. 47, Issue 3 https://doi.org/10.1007/s11033-020-05279-9	journal	February 2020
Shared and distinct transcriptomic cell types across neocortical areas Tasic, Bosiljka; Yao, Zizhen; Graybuck, Lucas T. Nature, Vol. 563, Issue 7729 https://doi.org/10.1038/s41586-018-0654-5	journal	October 2018
Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens Papalexi, Efthymia; Mimitou, Eleni P.; Butler, Andrew W. Nature Genetics, Vol. 53, Issue 3 https://doi.org/10.1038/s41588-021-00778-2	journal	March 2021
CXCR4 signaling directs Igk recombination and the molecular mechanisms of late B lymphopoiesis Mandal, Malay; Okoreeh, Michael K.; Kennedy, Domenick E. Nature Immunology, Vol. 20, Issue 10 https://doi.org/10.1038/s41590-019-0468-0	journal	September 2019
Acapsular Staphylococcus aureus with a non-functional agr regains capsule expression after passage through the bloodstream in a bacteremia mouse model Suligoy, Carlos M.; Díaz, Rocío E.; Gehrke, Ana-Katharina Scientific Reports, Vol. 10, Issue 1 https://doi.org/10.1038/s41598-020-70671-1	journal	August 2020
Origin and Evolution of Diploid and Allopolyploid Camelina Genomes was Accompanied by Chromosome Shattering Mandáková, Terezie; Pouch, Milan; Brock, Jordan R. The Plant Cell https://doi.org/10.1105/tpc.19.00366	journal	August 2019
GMATA: An Integrated Software Package for Genome-Scale SSR Mining, Marker Development and Viewing Wang, Xuewen; Wang, Le Frontiers in Plant Science, Vol. 7 https://doi.org/10.3389/fpls.2016.01350	journal	September 2016
Comparative Analysis of Tandem Repeats from Hundreds of Species Reveals Unique Insights into Centromere Evolution Melters, Daniël P.; Bradnam, Keith R.; Young, Hugh A. arXiv https://doi.org/10.48550/arxiv.1209.4967	text	January 2012

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Repertoires of G protein-coupled receptors for Ciona -specific neuropeptides Shiraishi, Akira; Okuda, Toshimi; Miyasaka, Natsuko Proceedings of the National Academy of Sciences, Vol. 116, Issue 16 https://doi.org/10.1073/pnas.1816640116	journal	April 2019
Phylogenomics reveals the evolutionary timing and pattern of butterflies and moths Kawahara, Akito Y.; Plotkin, David; Espeland, Marianne Proceedings of the National Academy of Sciences, Vol. 116, Issue 45 https://doi.org/10.1073/pnas.1907847116	journal	October 2019
The Old and the New: Discovery Proteomics Identifies Putative Novel Seminal Fluid Proteins in Drosophila Karr, Timothy L.; Southern, Helen; Rosenow, Matthew A. Molecular & Cellular Proteomics, Vol. 18 https://doi.org/10.1074/mcp.ra118.001098	journal	March 2019
Draft genome sequence of an inbred line of Chenopodium quinoa , an allotetraploid crop with great environmental adaptability and outstanding nutritional properties Yasui, Yasuo; Hirakawa, Hideki; Oikawa, Tetsuo DNA Research, Vol. 23, Issue 6 https://doi.org/10.1093/dnares/dsw037	journal	July 2016
Horizontal Transfer and Death of a Fungal Secondary Metabolic Gene Cluster Campbell, Matthew A.; Rokas, Antonis; Slot, Jason C. Genome Biology and Evolution, Vol. 4, Issue 3 https://doi.org/10.1093/gbe/evs011	journal	January 2012
Rolling-Circle Transposons Catalyze Genomic Innovation in a Mammalian Lineage Thomas, Jainy; Phillips, Caleb D.; Baker, Robert J. Genome Biology and Evolution, Vol. 6, Issue 10 https://doi.org/10.1093/gbe/evu204	journal	September 2014
Genome Evolution in the Primary Endosymbiont of Whiteflies Sheds Light on Their Divergence Santos-Garcia, Diego; Vargas-Chavez, Carlos; Moya, Andrés Genome Biology and Evolution, Vol. 7, Issue 3 https://doi.org/10.1093/gbe/evv038	journal	February 2015
Expansion Mechanisms and Evolutionary History on Genes Encoding DNA Glycosylases and Their Involvement in Stress and Hormone Signaling Jiang, Shu-Ye; Ramachandran, Srinivasan Genome Biology and Evolution, Vol. 8, Issue 4 https://doi.org/10.1093/gbe/evw067	journal	March 2016
Rapid Expansion of a Highly Germline-Expressed Mariner Element Acquired by Horizontal Transfer in the Fire Ant Genome Lee, Chih-Chi; Wang, John Genome Biology and Evolution, Vol. 10, Issue 12 https://doi.org/10.1093/gbe/evy220	journal	October 2018
Deleterious Mutation Accumulation in Arabidopsis thaliana Pollen Genes: A Role for a Recent Relaxation of Selection Harrison, Mark C.; Mallon, Eamonn B.; Twell, Dave Genome Biology and Evolution, Vol. 11, Issue 7 https://doi.org/10.1093/gbe/evz127	journal	June 2019
Genomic consequences of dietary diversification and parallel evolution due to nectarivory in leaf-nosed bats Gutiérrez-Guerrero, Yocelyn T.; Ibarra-Laclette, Enrique; Martínez del Río, Carlos GigaScience, Vol. 9, Issue 6 https://doi.org/10.1093/gigascience/giaa059	journal	June 2020
Genome sequence of Malania oleifera , a tree with great value for nervonic acid production Xu, Chao-Qun; Liu, Hui; Zhou, Shan-Shan GigaScience, Vol. 8, Issue 2 https://doi.org/10.1093/gigascience/giy164	journal	January 2019
De novo genome assembly of the endangered Acer yangbiense, a plant species with extremely small populations endemic to Yunnan Province, China Yang, Jing; Wariss, Hafiz Muhammad; Tao, Lidan GigaScience, Vol. 8, Issue 7 https://doi.org/10.1093/gigascience/giz085	journal	July 2019
Genomic evidence of neo-sex chromosomes in the eastern yellow robin Gan, Han Ming; Falk, Stephanie; Morales, Hernán E. GigaScience, Vol. 8, Issue 9 https://doi.org/10.1093/gigascience/giz111	journal	September 2019
Genome-Wide Patterns of Sequence Divergence of Protein-Coding Genes Between Drosophila buzzatii and D. mojavensis Guillén, Yolanda; Casillas, Sònia; Ruiz, Alfredo Journal of Heredity, Vol. 110, Issue 1 https://doi.org/10.1093/jhered/esy041	journal	August 2018
Genomic Basis of Adaptive Evolution: The Survival of Amur Ide ( Leuciscu s waleckii ) in an Extremely Alkaline Environment Xu, Jian; Li, Jiong-Tang; Jiang, Yanliang Molecular Biology and Evolution, Vol. 34, Issue 1 https://doi.org/10.1093/molbev/msw230	journal	October 2016
Molecular evolutionary and structural analysis of the cytosolic DNA sensor cGAS and STING Wu, Xiaomei; Wu, Fei-Hua; Wang, Xiaoqiang Nucleic Acids Research, Vol. 42, Issue 13 https://doi.org/10.1093/nar/gku569	journal	June 2014
Genome-Wide Identification, Evolution and Functional Divergence of MYB Transcription Factors in Chinese White Pear ( Pyrus bretschneideri ) Li, Xiaolong; Xue, Cheng; Li, Jiaming Plant and Cell Physiology, Vol. 57, Issue 4 https://doi.org/10.1093/pcp/pcw029	journal	February 2016
Coalescent versus Concatenation Methods and the Placement of Amborella as Sister to Water Lilies Xi, Zhenxiang; Liu, Liang; Rest, Joshua S. Systematic Biology, Vol. 63, Issue 6 https://doi.org/10.1093/sysbio/syu055	journal	July 2014
Ecological genomics of mutualism decline in nitrogen-fixing bacteria Klinger, Christie R.; Lau, Jennifer A.; Heath, Katy D. Proceedings of the Royal Society B: Biological Sciences, Vol. 283, Issue 1826 https://doi.org/10.1098/rspb.2015.2563	journal	March 2016
Phylogenomic analysis of Calyptratae: resolving the phylogenetic relationships within a major radiation of Diptera Narayanan Kutty, Sujatha; Meusemann, Karen; Bayless, Keith M. Cladistics, Vol. 35, Issue 6 https://doi.org/10.1111/cla.12375	journal	February 2019
Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza: Genome evolution in polyploid Oryza Ammiraju, Jetty S. S.; Fan, Chuanzhu; Yu, Yeisoo The Plant Journal, Vol. 63, Issue 3 https://doi.org/10.1111/j.1365-313x.2010.04251.x	journal	May 2010
Metagenomic analysis of a complex marine planktonic thaumarchaeal community from the Gulf of Maine: Metagenomic analysis of marine planktonic Thaumarchaea Tully, Benjamin J.; Nelson, William C.; Heidelberg, John F. Environmental Microbiology, Vol. 14, Issue 1 https://doi.org/10.1111/j.1462-2920.2011.02628.x	journal	November 2011
Timing of the Functional Diversification of α- and β-Adrenoceptors in Fish and Other Vertebrates Aris-Brosou, S.; Chen, X.; Perry, S. F. Annals of the New York Academy of Sciences, Vol. 1163, Issue 1 https://doi.org/10.1111/j.1749-6632.2009.04451.x	journal	April 2009
Widespread ancient whole-genome duplications in Malpighiales coincide with Eocene global climatic upheaval Cai, Liming; Xi, Zhenxiang; Amorim, André M. New Phytologist, Vol. 221, Issue 1 https://doi.org/10.1111/nph.15357	journal	July 2018
Hybrid capture data unravel a rapid radiation of pimpliform parasitoid wasps (Hymenoptera: Ichneumonidae: Pimpliformes): Rapid radiation of pimpliform parasitoid wasps Klopfstein, Seraina; Langille, Barbara; Spasojevic, Tamara Systematic Entomology, Vol. 44, Issue 2 https://doi.org/10.1111/syen.12333	journal	October 2018
Adaptive archaic introgression of copy number variants and the discovery of previously unknown human genes Hsieh, PingHsun; Vollger, Mitchell R.; Dang, Vy Science, Vol. 366, Issue 6463 https://doi.org/10.1126/science.aax2083	journal	October 2019
Host and Viral Determinants of Mx2 Antiretroviral Activity Busnadiego, Idoia; Kane, Melissa; Rihn, Suzannah J. Journal of Virology, Vol. 88, Issue 14 https://doi.org/10.1128/JVI.00214-14	journal	April 2014
TRIM69 Inhibits Vesicular Stomatitis Indiana Virus Rihn, Suzannah J.; Aziz, Muhamad Afiq; Stewart, Douglas G. Journal of Virology, Vol. 93, Issue 20 https://doi.org/10.1128/JVI.00951-19	journal	October 2019
Evolutionary Model of Cluster Divergence of the Emergent Marine Pathogen Vibrio vulnificus : From Genotype to Ecotype López-Pérez, Mario; Jayakumar, Jane M.; Haro-Moreno, Jose M. mBio, Vol. 10, Issue 1 https://doi.org/10.1128/mbio.02852-18	journal	February 2019
Comparative Genome Analyses of Vibrio anguillarum Strains Reveal a Link with Pathogenicity Traits Castillo, Daniel; Alvise, Paul D.; Xu, Ruiqi mSystems, Vol. 2, Issue 1 https://doi.org/10.1128/msystems.00001-17	journal	February 2017
Genome-wide searches and molecular analyses highlight the unique evolutionary path of flavone synthase I (FNSI) in Apiaceae Wang, Qi-Zhi; Downie, Stephen R.; Chen, Zhen-Xi Genome, Vol. 61, Issue 2 https://doi.org/10.1139/gen-2017-0117	journal	February 2018
The WRKY Transcription Factor Genes in Lotus japonicus Song, Hui; Wang, Pengfei; Nan, Zhibiao International Journal of Genomics, Vol. 2014 https://doi.org/10.1155/2014/420128	journal	January 2014
Positive Selection of Squalene Synthase in Cucurbitaceae Plants Qian, Jieying; Liu, Yong; Ma, Chengtong International Journal of Genomics, Vol. 2019 https://doi.org/10.1155/2019/5913491	journal	May 2019
Genome-Wide Comprehensive Analysis of the SABATH Gene Family in Arabidopsis and Rice Wang, Bin; Li, Min; Yuan, Yijun Evolutionary Bioinformatics, Vol. 15 https://doi.org/10.1177/1176934319860864	journal	January 2019
Phylogenomic analyses reveal a molecular signature linked to subterranean adaptation in rodents Du, Kang; Yang, Liandong; He, Shunping BMC Evolutionary Biology, Vol. 15, Issue 1 https://doi.org/10.1186/s12862-015-0564-1	journal	December 2015
Analysis of the erythropoietin of a Tibetan Plateau schizothoracine fish (Gymnocypris dobula) reveals enhanced cytoprotection function in hypoxic environments Xu, Qianghua; Zhang, Chi; Zhang, Dongsheng BMC Evolutionary Biology, Vol. 16, Issue 1 https://doi.org/10.1186/s12862-015-0581-0	journal	January 2016
Natriuretic peptides appeared after their receptors in vertebrates Grandchamp, Anna; Tahir, Shifa; Monget, Philippe BMC Evolutionary Biology, Vol. 19, Issue 1 https://doi.org/10.1186/s12862-019-1517-x	journal	November 2019
Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysis Patil, Gunvant; Valliyodan, Babu; Deshmukh, Rupesh BMC Genomics, Vol. 16, Issue 1 https://doi.org/10.1186/s12864-015-1730-y	journal	July 2015
Genome-wide investigation and expression analyses of the pentatricopeptide repeat protein gene family in foxtail millet Liu, Jia-Ming; Xu, Zhao-Shi; Lu, Pan-Pan BMC Genomics, Vol. 17, Issue 1 https://doi.org/10.1186/s12864-016-3184-2	journal	October 2016
Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum Olarte, Rodrigo A.; Menke, Jon; Zhang, Ying BMC Genomics, Vol. 20, Issue 1 https://doi.org/10.1186/s12864-018-5399-x	journal	February 2019
Genome-wide identification and interactome analysis of members of two-component system in Banana Dhar, Yogeshwar V.; Lakhwani, Deepika; Pandey, Ashutosh BMC Genomics, Vol. 20, Issue 1 https://doi.org/10.1186/s12864-019-6050-1	journal	August 2019
Genomic insight into the origins and evolution of symbiosis genes in Phaseolus vulgaris microsymbionts Tong, Wenjun; Li, Xiangchen; Wang, Entao BMC Genomics, Vol. 21, Issue 1 https://doi.org/10.1186/s12864-020-6578-0	journal	February 2020
Positive selection and functional divergence of farnesyl pyrophosphate synthase genes in plants Qian, Jieying; Liu, Yong; Chao, Naixia BMC Molecular Biology, Vol. 18, Issue 1 https://doi.org/10.1186/s12867-017-0081-4	journal	February 2017
Evolution by duplication: paleopolyploidy events in plants reconstructed by deciphering the evolutionary history of VOZ transcription factors Gao, Bei; Chen, Moxian; Li, Xiaoshuang BMC Plant Biology, Vol. 18, Issue 1 https://doi.org/10.1186/s12870-018-1437-8	journal	October 2018
The Extinction Dynamics of Bacterial Pseudogenes Kuo, Chih-Horng; Ochman, Howard PLoS Genetics, Vol. 6, Issue 8 https://doi.org/10.1371/journal.pgen.1001050	journal	August 2010
Control of yeast retrotransposons mediated through nucleoporin evolution Rowley, Paul A.; Patterson, Kurt; Sandmeyer, Suzanne B. PLOS Genetics, Vol. 14, Issue 4 https://doi.org/10.1371/journal.pgen.1007325	journal	April 2018
Evolutionary Genomics Reveals Lineage-Specific Gene Loss and Rapid Evolution of a Sperm-Specific Ion Channel Complex: CatSpers and CatSperβ Cai, Xinjiang; Clapham, David E. PLoS ONE, Vol. 3, Issue 10 https://doi.org/10.1371/journal.pone.0003569	journal	October 2008
Comprehensive Genome-Wide Survey, Genomic Constitution and Expression Profiling of the NAC Transcription Factor Family in Foxtail Millet (Setaria italica L.) Puranik, Swati; Sahu, Pranav Pankaj; Mandal, Sambhu Nath PLoS ONE, Vol. 8, Issue 5 https://doi.org/10.1371/journal.pone.0064594	journal	May 2013
Insights into the Development and Evolution of Exaggerated Traits Using De Novo Transcriptomes of Two Species of Horned Scarab Beetles Warren, Ian A.; Vera, J. Cristobal; Johns, Annika PLoS ONE, Vol. 9, Issue 2 https://doi.org/10.1371/journal.pone.0088364	journal	February 2014
PON-P2: Prediction Method for Fast and Reliable Identification of Harmful Variants Niroula, Abhishek; Urolagin, Siddhaling; Vihinen, Mauno PLOS ONE, Vol. 10, Issue 2 https://doi.org/10.1371/journal.pone.0117380	journal	February 2015
A comparative transcriptomic analysis reveals the core genetic components of salt and osmotic stress responses in Braya humilis Zhao, Pengshan; Wang, Lirong; Zhao, Xin PLOS ONE, Vol. 12, Issue 8 https://doi.org/10.1371/journal.pone.0183778	journal	August 2017
Molecular identification of the phosphate transporter family 1 (PHT1) genes and their expression profiles in response to phosphorus deprivation and other abiotic stresses in Brassica napus Li, Yu; Wang, Xue; Zhang, Hao PLOS ONE, Vol. 14, Issue 7 https://doi.org/10.1371/journal.pone.0220374	journal	July 2019
Genome-wide identification and expression profile analysis of nuclear factor Y family genes in Sorghum bicolor L. (Moench) Maheshwari, P.; Kummari, Divya; Palakolanu, Sudhakar Reddy PLOS ONE, Vol. 14, Issue 9 https://doi.org/10.1371/journal.pone.0222203	journal	September 2019
The discovery of Halictivirus resolves the Sinaivirus phylogeny. Bigot, Diane; Dalmon, Anne; Roy, Bronwen Apollo - University of Cambridge Repository https://doi.org/10.17863/cam.18136	text	January 2017
An LTR Retrotransposon-Derived Gene Displays Lineage-Specific Structural and Putative Species-Specific Functional Variations in Eutherians Irie, Masahito; Koga, Akihiko; Kaneko-Ishino, Tomoko Frontiers in Chemistry, Vol. 4 https://doi.org/10.3389/fchem.2016.00026	journal	June 2016
Comparative Genomic Analysis of the GRF Genes in Chinese Pear (Pyrus bretschneideri Rehd), Poplar (Populous), Grape (Vitis vinifera), Arabidopsis and Rice (Oryza sativa) Cao, Yunpeng; Han, Yahui; Jin, Qing Frontiers in Plant Science, Vol. 7 https://doi.org/10.3389/fpls.2016.01750	journal	November 2016
Evolution and Expansion of the Prokaryote-Like Lipoxygenase Family in the Brown Alga Saccharina japonica Teng, Linhong; Han, Wentao; Fan, Xiao Frontiers in Plant Science, Vol. 8 https://doi.org/10.3389/fpls.2017.02018	journal	November 2017
The Chalcone Isomerase Family in Cotton: Whole-Genome Bioinformatic and Expression Analyses of the Gossypium barbadense L. Response to Fusarium Wilt Infection Zu, Qian-Li; Qu, Yan-Ying; Ni, Zhi-Yong Genes, Vol. 10, Issue 12 https://doi.org/10.3390/genes10121006	journal	December 2019
Genome-Wide Identification and Characterization of Pectin Methylesterase Inhibitor Genes in Brassica oleracea Liu, Tingting; Yu, Hui; Xiong, Xingpeng International Journal of Molecular Sciences, Vol. 19, Issue 11 https://doi.org/10.3390/ijms19113338	journal	October 2018
Hadrurid Scorpion Toxins: Evolutionary Conservation and Selective Pressures Santibáñez-López, Carlos E.; Graham, Matthew R.; Sharma, Prashant P. Toxins, Vol. 11, Issue 11 https://doi.org/10.3390/toxins11110637	journal	November 2019
HGT-Finder: A New Tool for Horizontal Gene Transfer Finding and Application to Aspergillus genomes Nguyen, Marcus; Ekstrom, Alex; Li, Xueqiong Toxins, Vol. 7, Issue 10 https://doi.org/10.3390/toxins7104035	journal	October 2015
Timing of rapid diversification and convergent origins of active pollination within Agavoideae (Asparagaceae) McKain, Michael R.; McNeal, Joel R.; Kellar, P. Roxanne American Journal of Botany, Vol. 103, Issue 10 https://doi.org/10.3732/ajb.1600198	journal	October 2016
Inverted formin 2 regulates intracellular trafficking, placentation, and pregnancy outcome Lamm, Katherine Young Bezold; Johnson, Maddison L.; Baker Phillips, Julie eLife, Vol. 7 https://doi.org/10.7554/eLife.31150	journal	January 2018

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