skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Contact Mechanics of a Small Icosahedral Virus

Abstract

Not provided.

Authors:
; ; ; ; ;
Publication Date:
Research Org.:
Indiana Univ., Bloomington, IN (United States)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1536530
DOE Contract Number:  
SC0010507
Resource Type:
Journal Article
Journal Name:
Physical Review Letters
Additional Journal Information:
Journal Volume: 119; Journal Issue: 3; Journal ID: ISSN 0031-9007
Publisher:
American Physical Society (APS)
Country of Publication:
United States
Language:
English
Subject:
Physics

Citation Formats

Zeng, Cheng, Hernando-Pérez, Mercedes, Dragnea, Bogdan, Ma, Xiang, van der Schoot, Paul, and Zandi, Roya. Contact Mechanics of a Small Icosahedral Virus. United States: N. p., 2017. Web. doi:10.1103/physrevlett.119.038102.
Zeng, Cheng, Hernando-Pérez, Mercedes, Dragnea, Bogdan, Ma, Xiang, van der Schoot, Paul, & Zandi, Roya. Contact Mechanics of a Small Icosahedral Virus. United States. doi:10.1103/physrevlett.119.038102.
Zeng, Cheng, Hernando-Pérez, Mercedes, Dragnea, Bogdan, Ma, Xiang, van der Schoot, Paul, and Zandi, Roya. Sat . "Contact Mechanics of a Small Icosahedral Virus". United States. doi:10.1103/physrevlett.119.038102.
@article{osti_1536530,
title = {Contact Mechanics of a Small Icosahedral Virus},
author = {Zeng, Cheng and Hernando-Pérez, Mercedes and Dragnea, Bogdan and Ma, Xiang and van der Schoot, Paul and Zandi, Roya},
abstractNote = {Not provided.},
doi = {10.1103/physrevlett.119.038102},
journal = {Physical Review Letters},
issn = {0031-9007},
number = 3,
volume = 119,
place = {United States},
year = {2017},
month = {7}
}

Works referenced in this record:

Virus and Host Mechanics Support Membrane Penetration and Cell Entry
journal, February 2016


Structural changes of envelope proteins during alphavirus fusion
journal, December 2010


Activation of paramyxovirus membrane fusion and virus entry
journal, April 2014


Virus Entry by Endocytosis
journal, June 2010


From The Cover: Mechanics of receptor-mediated endocytosis
journal, June 2005

  • Gao, H.; Shi, W.; Freund, L. B.
  • Proceedings of the National Academy of Sciences, Vol. 102, Issue 27
  • DOI: 10.1073/pnas.0503879102

Cellular Uptake of Elastic Nanoparticles
journal, August 2011


Virion stiffness regulates immature HIV-1 entry
journal, January 2013


Surface tension and contact with soft elastic solids
journal, November 2013

  • Style, Robert W.; Hyland, Callen; Boltyanskiy, Rostislav
  • Nature Communications, Vol. 4, Issue 1
  • DOI: 10.1038/ncomms3728

Binding the Tobacco Mosaic Virus to Inorganic Surfaces
journal, January 2004

  • Knez, M.; Sumser, M. P.; Bittner, A. M.
  • Langmuir, Vol. 20, Issue 2
  • DOI: 10.1021/la035425o

Calcium Ions Modulate the Mechanics of Tomato Bushy Stunt Virus
journal, July 2015

  • Llauró, Aida; Coppari, Emilia; Imperatori, Francesca
  • Biophysical Journal, Vol. 109, Issue 2
  • DOI: 10.1016/j.bpj.2015.05.039

Cargo–shell and cargo–cargo couplings govern the mechanics of artificially loaded virus-derived cages
journal, January 2016

  • Llauró, Aida; Luque, Daniel; Edwards, Ethan
  • Nanoscale, Vol. 8, Issue 17
  • DOI: 10.1039/C6NR01007E

Tuning Viral Capsid Nanoparticle Stability with Symmetrical Morphogenesis
journal, August 2016


Probing the Link among Genomic Cargo, Contact Mechanics, and Nanoindentation in Recombinant Adeno-Associated Virus 2
journal, February 2017

  • Zeng, Cheng; Moller-Tank, Sven; Asokan, Aravind
  • The Journal of Physical Chemistry B, Vol. 121, Issue 8
  • DOI: 10.1021/acs.jpcb.6b10131

The Biological Frontier of Physics
journal, May 2006

  • Phillips, Rob; Quake, Stephen R.
  • Physics Today, Vol. 59, Issue 5
  • DOI: 10.1063/1.2216960

The physics of phages
journal, January 2008

  • Gelbart, William M.; Knobler, Charles M.
  • Physics Today, Vol. 61, Issue 1
  • DOI: 10.1063/1.2835152

The bacteriophage φ29 portal motor can package DNA against a large internal force
journal, October 2001

  • Smith, Douglas E.; Tans, Sander J.; Smith, Steven B.
  • Nature, Vol. 413, Issue 6857
  • DOI: 10.1038/35099581

Mechanics of DNA packaging in viruses
journal, March 2003

  • Purohit, P. K.; Kondev, J.; Phillips, R.
  • Proceedings of the National Academy of Sciences, Vol. 100, Issue 6
  • DOI: 10.1073/pnas.0737893100

Single-molecule studies of viral DNA packaging
journal, August 2011


Nanoindentation studies of full and empty viral capsids and the effects of capsid protein mutations on elasticity and strength
journal, April 2006

  • Michel, J. P.; Ivanovska, I. L.; Gibbons, M. M.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 16
  • DOI: 10.1073/pnas.0601744103

Physical virology
journal, October 2010

  • Roos, W. H.; Bruinsma, R.; Wuite, G. J. L.
  • Nature Physics, Vol. 6, Issue 10
  • DOI: 10.1038/nphys1797

Built-In Mechanical Stress in Viral Shells
journal, February 2011


Swelling and Softening of the Cowpea Chlorotic Mottle Virus in Response to pH Shifts
journal, May 2015

  • Wilts, Bodo D.; Schaap, Iwan A. T.; Schmidt, Christoph F.
  • Biophysical Journal, Vol. 108, Issue 10
  • DOI: 10.1016/j.bpj.2015.04.019

DNA-mediated anisotropic mechanical reinforcement of a virus
journal, August 2006

  • Carrasco, C.; Carreira, A.; Schaap, I. A. T.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 37
  • DOI: 10.1073/pnas.0601881103

The Tripartite Virions of the Brome Mosaic Virus Have Distinct Physical Properties That Affect the Timing of the Infection Process
journal, March 2014

  • Vaughan, R.; Tragesser, B.; Ni, P.
  • Journal of Virology, Vol. 88, Issue 11
  • DOI: 10.1128/JVI.00377-14

Modeling and simulation of the mechanical response from nanoindentation test of DNA-filled viral capsids
journal, March 2013

  • Ahadi, Aylin; Johansson, Dan; Evilevitch, Alex
  • Journal of Biological Physics, Vol. 39, Issue 2
  • DOI: 10.1007/s10867-013-9297-9

Imaging and manipulation of single viruses by atomic force microscopy
journal, January 2010

  • Baclayon, M.; Wuite, G. J. L.; Roos, W. H.
  • Soft Matter, Vol. 6, Issue 21
  • DOI: 10.1039/b923992h

Tapping mode atomic force microscopy in liquids
journal, March 1994

  • Hansma, P. K.; Cleveland, J. P.; Radmacher, M.
  • Applied Physics Letters, Vol. 64, Issue 13
  • DOI: 10.1063/1.111795

Jumping mode scanning force microscopy: a suitable technique for imaging DNA in liquids
journal, March 2003


Resolving Structure and Mechanical Properties at the Nanoscale of Viruses with Frequency Modulation Atomic Force Microscopy
journal, January 2012


Unmasking Imaging Forces on Soft Biological Samples in Liquids When Using Dynamic Atomic Force Microscopy: A Case Study on Viral Capsids
journal, September 2008


Molecular resolution imaging of macromolecular crystals by atomic force microscopy
journal, May 1997


Adsorption of Biological Molecules to a Solid Support for Scanning Probe Microscopy
journal, July 1997

  • Müller, Daniel J.; Amrein, Mattihas; Engel, Andreas
  • Journal of Structural Biology, Vol. 119, Issue 2
  • DOI: 10.1006/jsbi.1997.3875

Imaging of viruses by atomic force microscopy
journal, September 2001


Brome mosaic virus, good for an RNA virologist's basic needs
journal, March 2000


An atomic model of brome mosaic virus using direct electron detection and real-space optimization
journal, September 2014

  • Wang, Zhao; Hryc, Corey F.; Bammes, Benjamin
  • Nature Communications, Vol. 5, Issue 1
  • DOI: 10.1038/ncomms5808

Adhesion of membranes: a theoretical perspective
journal, September 1991


UCSF Chimera?A visualization system for exploratory research and analysis
journal, January 2004

  • Pettersen, Eric F.; Goddard, Thomas D.; Huang, Conrad C.
  • Journal of Computational Chemistry, Vol. 25, Issue 13
  • DOI: 10.1002/jcc.20084

An Examination of the Electrostatic Interactions between the N-Terminal Tail of the Brome Mosaic Virus Coat Protein and Encapsidated RNAs
journal, June 2012


The crystallographic structure of brome mosaic virus
journal, March 2002

  • Lucas, Robert W.; Larson, Steven B.; McPherson, Alexander
  • Journal of Molecular Biology, Vol. 317, Issue 1
  • DOI: 10.1006/jmbi.2001.5389

DNA binding to mica correlates with cationic radius: assay by atomic force microscopy
journal, April 1996


Elastic Properties of Lipid Bilayers: Theory and Possible Experiments
journal, December 1973


Adhesion of vesicles
journal, October 1990


Mechanical limits of viral capsids
journal, June 2007

  • Buenemann, M.; Lenz, P.
  • Proceedings of the National Academy of Sciences, Vol. 104, Issue 24
  • DOI: 10.1073/pnas.0611472104

Influence of Nonuniform Geometry on Nanoindentation of Viral Capsids
journal, October 2008


Effect of Chain Length and Unsaturation on Elasticity of Lipid Bilayers
journal, July 2000


Nonlinear finite-element analysis of nanoindentation of viral capsids
journal, March 2007


Size and mechanical stability of norovirus capsids depend on pH: a nanoindentation study
journal, June 2010

  • Cuellar, J. L.; Meinhoevel, F.; Hoehne, M.
  • Journal of General Virology, Vol. 91, Issue 10
  • DOI: 10.1099/vir.0.021212-0

Squeezing Protein Shells: How Continuum Elastic Models, Molecular Dynamics Simulations, and Experiments Coalesce at the Nanoscale
journal, August 2010


Viral Capsid Equilibrium Dynamics Reveals Nonuniform Elastic Properties
journal, June 2011


Mechanical properties of viral capsids
journal, August 2005


Breaking a virus: Identifying molecular level failure modes of a viral capsid by multiscale modeling
journal, July 2016

  • Krishnamani, V.; Globisch, C.; Peter, C.
  • The European Physical Journal Special Topics, Vol. 225, Issue 8-9
  • DOI: 10.1140/epjst/e2016-60141-2

Diversity and Identity of Mechanical Properties of Icosahedral Viral Capsids Studied with Elastic Network Normal Mode Analysis
journal, January 2005


Elastic properties and mechanical stability of chiral and filled viral capsids
journal, November 2008


Virus shapes and buckling transitions in spherical shells
journal, November 2003


The Plant Host Can Affect the Encapsidation of Brome Mosaic Virus (BMV) RNA: BMV Virions Are Surprisingly Heterogeneous
journal, March 2014

  • Ni, Peng; Vaughan, Robert C.; Tragesser, Brady
  • Journal of Molecular Biology, Vol. 426, Issue 5
  • DOI: 10.1016/j.jmb.2013.09.007