Redox and temperature-sensitive changes in microbial communities and soil chemistry dictate greenhouse gas loss from thawed permafrost
Abstract
Not provided.
- Authors:
- Publication Date:
- Research Org.:
- Colorado State Univ., Fort Collins, CO (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC)
- OSTI Identifier:
- 1533324
- DOE Contract Number:
- SC0010568
- Resource Type:
- Journal Article
- Journal Name:
- Biogeochemistry
- Additional Journal Information:
- Journal Volume: 134; Journal Issue: 1-2; Journal ID: ISSN 0168-2563
- Publisher:
- Springer
- Country of Publication:
- United States
- Language:
- English
- Subject:
- Environmental Sciences & Ecology; Geology
Citation Formats
Ernakovich, Jessica G., Lynch, Laurel M., Brewer, Paul E., Calderon, Francisco J., and Wallenstein, Matthew D. Redox and temperature-sensitive changes in microbial communities and soil chemistry dictate greenhouse gas loss from thawed permafrost. United States: N. p., 2017.
Web. doi:10.1007/s10533-017-0354-5.
Ernakovich, Jessica G., Lynch, Laurel M., Brewer, Paul E., Calderon, Francisco J., & Wallenstein, Matthew D. Redox and temperature-sensitive changes in microbial communities and soil chemistry dictate greenhouse gas loss from thawed permafrost. United States. doi:10.1007/s10533-017-0354-5.
Ernakovich, Jessica G., Lynch, Laurel M., Brewer, Paul E., Calderon, Francisco J., and Wallenstein, Matthew D. Sat .
"Redox and temperature-sensitive changes in microbial communities and soil chemistry dictate greenhouse gas loss from thawed permafrost". United States. doi:10.1007/s10533-017-0354-5.
@article{osti_1533324,
title = {Redox and temperature-sensitive changes in microbial communities and soil chemistry dictate greenhouse gas loss from thawed permafrost},
author = {Ernakovich, Jessica G. and Lynch, Laurel M. and Brewer, Paul E. and Calderon, Francisco J. and Wallenstein, Matthew D.},
abstractNote = {Not provided.},
doi = {10.1007/s10533-017-0354-5},
journal = {Biogeochemistry},
issn = {0168-2563},
number = 1-2,
volume = 134,
place = {United States},
year = {2017},
month = {7}
}
Other availability
Save to My Library
You must Sign In or Create an Account in order to save documents to your library.
Works referenced in this record:
A trait-based approach for modelling microbial litter decomposition
journal, May 2012
- Allison, S. D.
- Ecology Letters, Vol. 15, Issue 9
Determining soil organic matter quality under anaerobic conditions in arctic and subarctic soils
journal, March 2006
- Andersen, Sarah K.; White, Daniel M.
- Cold Regions Science and Technology, Vol. 44, Issue 2
Potential feedback of thawing permafrost to the global climate system through methane emission
journal, October 2007
- Anisimov, O. A.
- Environmental Research Letters, Vol. 2, Issue 4
Substrate utilisation profiles of microbial communities in peat are depth dependent and correlate with whole soil FTIR profiles
journal, September 2006
- Artz, R.; Chapman, S.; Campbell, C.
- Soil Biology and Biochemistry, Vol. 38, Issue 9
High-throughput Fluorometric Measurement of Potential Soil Extracellular Enzyme Activities
journal, January 2013
- Bell, Colin W.; Fricks, Barbara E.; Rocca, Jennifer D.
- Journal of Visualized Experiments, Issue 81
Response of Methanogens in Arctic Sediments to Temperature and Methanogenic Substrate Availability
journal, June 2015
- Blake, Lynsay I.; Tveit, Alexander; Øvreås, Lise
- PLOS ONE, Vol. 10, Issue 6
Inhibition of methane formation in soil by various nitrogen-containing compounds
journal, September 1973
- Bollag, J. -M.; Czlonkowski, S. T.
- Soil Biology and Biochemistry, Vol. 5, Issue 5
Clay Mineralogy in Arctic Tundra Gelisols, Northern Alaska
journal, January 2010
- Borden, Patrick W.; Ping, Chien-Lu; McCarthy, Paul J.
- Soil Science Society of America Journal, Vol. 74, Issue 2
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
journal, June 2010
- Caporaso, J. G.; Lauber, C. L.; Walters, W. A.
- Proceedings of the National Academy of Sciences, Vol. 108, Issue Supplement_1
Unifying the derivations for the Akaike and corrected Akaike information criteria
journal, April 1997
- Cavanaugh, Joseph E.
- Statistics & Probability Letters, Vol. 33, Issue 2
Litter quality versus soil microbial community controls over decomposition: a quantitative analysis
journal, September 2013
- Cleveland, Cory C.; Reed, Sasha C.; Keller, Adrienne B.
- Oecologia, Vol. 174, Issue 1
The transcriptional response of microbial communities in thawing Alaskan permafrost soils
journal, March 2015
- Coolen, Marco J. L.; Orsi, William D.
- Frontiers in Microbiology, Vol. 6
Bioavailability of soil organic matter and microbial community dynamics upon permafrost thaw: Bioavailability of permafrost organic matter
journal, May 2011
- Coolen, Marco J. L.; van de Giessen, Jeroen; Zhu, Elizabeth Y.
- Environmental Microbiology, Vol. 13, Issue 8
Formation of soil organic matter via biochemical and physical pathways of litter mass loss
journal, September 2015
- Cotrufo, M. Francesca; Soong, Jennifer L.; Horton, Andrew J.
- Nature Geoscience, Vol. 8, Issue 10
Comparing bioavailability in five Arctic soils by pyrolysis-gas chromatography/mass spectrometry
journal, February 2002
- Dai, X. Y.; White, D.; Ping, C. L.
- Journal of Analytical and Applied Pyrolysis, Vol. 62, Issue 2
Evidence for spatially inaccessible labile N from a comparison of soil core extractions and soil pore water lysimetry
journal, June 2014
- Darrouzet-Nardi, Anthony; Weintraub, Michael N.
- Soil Biology and Biochemistry, Vol. 73
Soil microbial responses to elevated phosphorus and pH in acidic temperate deciduous forests
journal, July 2011
- DeForest, Jared L.; Smemo, Kurt A.; Burke, David J.
- Biogeochemistry, Vol. 109, Issue 1-3
Intermediary ecosystem metabolism as a main driver of methanogenesis in acidic wetland soil: Drivers of methanogenesis in fen soil
journal, July 2009
- Drake, Harold L.; Horn, Marcus A.; Wüst, Pia K.
- Environmental Microbiology Reports, Vol. 1, Issue 5
Potential carbon release from permafrost soils of Northeastern Siberia
journal, December 2006
- Dutta, Koushik; Schuur, E. A. G.; Neff, J. C.
- Global Change Biology, Vol. 12, Issue 12
Search and clustering orders of magnitude faster than BLAST
journal, August 2010
- Edgar, Robert C.
- Bioinformatics, Vol. 26, Issue 19, p. 2460-2461
UPARSE: highly accurate OTU sequences from microbial amplicon reads
journal, August 2013
- Edgar, Robert C.
- Nature Methods, Vol. 10, Issue 10
Long-term CO2 production following permafrost thaw
journal, July 2013
- Elberling, Bo; Michelsen, Anders; Schädel, Christina
- Nature Climate Change, Vol. 3, Issue 10
Chemical Indicators of Cryoturbation and Microbial Processing throughout an Alaskan Permafrost Soil Depth Profile
journal, January 2015
- Ernakovich, Jessica G.; Wallenstein, Matthew D.; Calderón, F. J.
- Soil Science Society of America Journal, Vol. 79, Issue 3
A Proposed Mechanism for the Pulse in Carbon Dioxide Production Commonly Observed Following the Rapid Rewetting of a Dry Soil
journal, January 2003
- Fierer, Noah; Schimel, Joshua P.
- Soil Science Society of America Journal, Vol. 67, Issue 3
Microbial Functional Potential and Community Composition in Permafrost-Affected Soils of the NW Canadian Arctic
journal, January 2014
- Frank-Fahle, Béatrice A.; Yergeau, Étienne; Greer, Charles W.
- PLoS ONE, Vol. 9, Issue 1
An enzymic 'latch' on a global carbon store
journal, January 2001
- Freeman, Chris; Ostle, Nick; Kang, Hojeong
- Nature, Vol. 409, Issue 6817
Methanogenic communities in permafrost-affected soils of the Laptev Sea coast, Siberian Arctic, characterized by 16S rRNA gene fingerprints: Methanogenic communities in permafrost-affected soils
journal, February 2007
- Ganzert, Lars; Jurgens, German; Münster, Uwe
- FEMS Microbiology Ecology, Vol. 59, Issue 2
Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?
journal, February 2016
- Graham, Emily B.; Knelman, Joseph E.; Schindlbacher, Andreas
- Frontiers in Microbiology, Vol. 7
Challenges to incorporating spatially and temporally explicit phenomena (hotspots and hot moments) in denitrification models
journal, January 2009
- Groffman, Peter M.; Butterbach-Bahl, Klaus; Fulweiler, Robinson W.
- Biogeochemistry, Vol. 93, Issue 1-2
Drift and transmission FT-IR spectroscopy of forest soils: an approach to determine decomposition processes of forest litter
journal, April 1999
- Haberhauer, G.; Gerzabek, M. H.
- Vibrational Spectroscopy, Vol. 19, Issue 2
Comparison of the composition of forest soil litter derived from three different sites at various decompositional stages using FTIR spectroscopy
journal, May 1998
- Haberhauer, G.; Rafferty, B.; Strebl, F.
- Geoderma, Vol. 83, Issue 3-4
Field information links permafrost carbon to physical vulnerabilities of thawing: C AND N VULERABLITIES OF THAWING
journal, August 2012
- Harden, Jennifer W.; Koven, Charles D.; Ping, Chien-Lu
- Geophysical Research Letters, Vol. 39, Issue 15
Changes in peat chemistry associated with permafrost thaw increase greenhouse gas production
journal, April 2014
- Hodgkins, S. B.; Tfaily, M. M.; McCalley, C. K.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 16
Organic matter composition and stabilization in a polygonal tundra soil of the Lena Delta
journal, January 2013
- Höfle, S.; Rethemeyer, J.; Mueller, C. W.
- Biogeosciences, Vol. 10, Issue 5
Estimated stocks of circumpolar permafrost carbon with quantified uncertainty ranges and identified data gaps
journal, January 2014
- Hugelius, G.; Strauss, J.; Zubrzycki, S.
- Biogeosciences, Vol. 11, Issue 23
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes
journal, March 2015
- Hultman, Jenni; Waldrop, Mark P.; Mackelprang, Rachel
- Nature, Vol. 521, Issue 7551
Predicting long-term carbon mineralization and trace gas production from thawing permafrost of Northeast Siberia
journal, January 2013
- Knoblauch, Christian; Beer, Christian; Sosnin, Alexander
- Global Change Biology, Vol. 19, Issue 4
Trophic interactions in the methanogenic microbial community of low-temperature terrestrial ecosystems
journal, June 2005
- Kotsyurbenko, O. R.
- FEMS Microbiology Ecology, Vol. 53, Issue 1
On the formation of high-latitude soil carbon stocks: Effects of cryoturbation and insulation by organic matter in a land surface model
journal, January 2009
- Koven, C.; Friedlingstein, P.; Ciais, P.
- Geophysical Research Letters, Vol. 36, Issue 21
Permafrost carbon-climate feedbacks accelerate global warming
journal, August 2011
- Koven, C. D.; Ringeval, B.; Friedlingstein, P.
- Proceedings of the National Academy of Sciences, Vol. 108, Issue 36
A simplified, data-constrained approach to estimate the permafrost carbon–climate feedback
journal, November 2015
- Koven, C. D.; Schuur, E. A. G.; Schädel, C.
- Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 373, Issue 2054
Carbon-Degrading Enzyme Activities Stimulated by Increased Nutrient Availability in Arctic Tundra Soils
journal, October 2013
- Koyama, Akihiro; Wallenstein, Matthew D.; Simpson, Rodney T.
- PLoS ONE, Vol. 8, Issue 10
Sensitivity of a model projection of near-surface permafrost degradation to soil column depth and representation of soil organic matter
journal, January 2008
- Lawrence, David M.; Slater, Andrew G.; Romanovsky, Vladimir E.
- Journal of Geophysical Research, Vol. 113, Issue F2
Permafrost thaw and resulting soil moisture changes regulate projected high-latitude CO 2 and CH 4 emissions
journal, September 2015
- Lawrence, D. M.; Koven, C. D.; Swenson, S. C.
- Environmental Research Letters, Vol. 10, Issue 9
The rate of permafrost carbon release under aerobic and anaerobic conditions and its potential effects on climate
journal, September 2011
- Lee, Hanna; Schuur, Edward A. G.; Inglett, Kanika S.
- Global Change Biology, Vol. 18, Issue 2
Water-table height and microtopography control biogeochemical cycling in an Arctic coastal tundra ecosystem
journal, January 2012
- Lipson, D. A.; Zona, D.; Raab, T. K.
- Biogeosciences, Vol. 9, Issue 1
Quantitative and Qualitative Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities
journal, January 2007
- Lozupone, C. A.; Hamady, M.; Kelley, S. T.
- Applied and Environmental Microbiology, Vol. 73, Issue 5
Temperature Sensitivity of Methane Production in the Permafrost Active Layer at Stordalen, Sweden: A Comparison with Non-permafrost Northern Wetlands
journal, November 2012
- Lupascu, M.; Wadham, J. L.; Hornibrook, E. R. C.
- Arctic, Antarctic, and Alpine Research, Vol. 44, Issue 4
Significant contribution to climate warming from the permafrost carbon feedback
journal, September 2012
- MacDougall, Andrew H.; Avis, Christopher A.; Weaver, Andrew J.
- Nature Geoscience, Vol. 5, Issue 10
Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
journal, November 2011
- Mackelprang, Rachel; Waldrop, Mark P.; DeAngelis, Kristen M.
- Nature, Vol. 480, Issue 7377
Methane dynamics regulated by microbial community response to permafrost thaw
journal, October 2014
- McCalley, Carmody K.; Woodcroft, Ben J.; Hodgkins, Suzanne B.
- Nature, Vol. 514, Issue 7523
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea
journal, December 2011
- McDonald, Daniel; Price, Morgan N.; Goodrich, Julia
- The ISME Journal, Vol. 6, Issue 3
Microbial activity is not always limited by nitrogen in Arctic tundra soils
journal, November 2015
- Melle, Caroline; Wallenstein, Matthew; Darrouzet-Nardi, Anthony
- Soil Biology and Biochemistry, Vol. 90
Discovery of a novel methanogen prevalent in thawing permafrost
journal, February 2014
- Mondav, Rhiannon; Woodcroft, Ben J.; Kim, Eun-Hae
- Nature Communications, Vol. 5, Issue 1
Fourier Transform Infrared (FTIR) Spectroscopy of Biological Tissues
journal, February 2008
- Movasaghi, Zanyar; Rehman, Shazza; ur Rehman, Dr. Ihtesham
- Applied Spectroscopy Reviews, Vol. 43, Issue 2
Effects of Temperature and Substrate Quality on Element Mineralization in Six Arctic Soils
journal, February 1991
- Nadelhoffer, K. J.; Giblin, A. E.; Shaver, G. R.
- Ecology, Vol. 72, Issue 1
Sequential reduction processes and initiation of CH4 production upon flooding of oxic upland soils
journal, March 1996
- Peters, Verena; Conrad, Ralf
- Soil Biology and Biochemistry, Vol. 28, Issue 3
Permafrost soils and carbon cycling
journal, January 2015
- Ping, C. L.; Jastrow, J. D.; Jorgenson, M. T.
- SOIL, Vol. 1, Issue 1
Gene-centric approach to integrating environmental genomics and biogeochemical models
journal, January 2014
- Reed, Daniel C.; Algar, Christopher K.; Huber, Julie A.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 5
Barriers to predicting changes in global terrestrial methane fluxes: analyses using CLM4Me, a methane biogeochemistry model integrated in CESM
journal, January 2011
- Riley, W. J.; Subin, Z. M.; Lawrence, D. M.
- Biogeosciences, Vol. 8, Issue 7
Biogeochemistry of methane and methanogenic archaea in permafrost: Methane and methanogenic archaea in permafrost
journal, July 2007
- Rivkina, Elizaveta; Shcherbakova, Viktoria; Laurinavichius, Kestas
- FEMS Microbiology Ecology, Vol. 61, Issue 1
Microbial characteristics of soils on a latitudinal transect in Siberia
journal, July 2003
- Santruckova, Hana; Bird, Michael I.; Kalaschnikov, Yevgeniy N.
- Global Change Biology, Vol. 9, Issue 7
Circumpolar assessment of permafrost C quality and its vulnerability over time using long-term incubation data
journal, October 2013
- Schädel, Christina; Schuur, Edward A. G.; Bracho, Rosvel
- Global Change Biology, Vol. 20, Issue 2
Effects of Soil Organic Matter Properties and Microbial Community Composition on Enzyme Activities in Cryoturbated Arctic Soils
journal, April 2014
- Schnecker, Jörg; Wild, Birgit; Hofhansl, Florian
- PLoS ONE, Vol. 9, Issue 4
Vulnerability of Permafrost Carbon to Climate Change: Implications for the Global Carbon Cycle
journal, September 2008
- Schuur, Edward A. G.; Bockheim, James; Canadell, Josep G.
- BioScience, Vol. 58, Issue 8
Climate change and the permafrost carbon feedback
journal, April 2015
- Schuur, E. A. G.; McGuire, A. D.; Schädel, C.
- Nature, Vol. 520, Issue 7546
Responses of a tundra system to warming using SCAMPS: a stoichiometrically coupled, acclimating microbe–plant–soil model
journal, February 2014
- Sistla, Seeta A.; Rastetter, Edward B.; Schimel, Joshua P.
- Ecological Monographs, Vol. 84, Issue 1
Organic matter chemistry controls greenhouse gas emissions from permafrost peatlands
journal, July 2016
- Sjögersten, S.; Caul, S.; Daniell, T. J.
- Soil Biology and Biochemistry, Vol. 98
Information theory and hypothesis testing: a call for pluralism
journal, February 2005
- Stephens, Philip A.; Buskirk, Steven W.; Hayward, Gregory D.
- Journal of Applied Ecology, Vol. 42, Issue 1
Improved simulation of the terrestrial hydrological cycle in permafrost regions by the Community Land Model: IMPROVED CLM COLD-REGION HYDROLOGY
journal, March 2012
- Swenson, S. C.; Lawrence, D. M.; Lee, Hanna
- Journal of Advances in Modeling Earth Systems, Vol. 4, Issue 3
A total quasi-steady-state formulation of substrate uptake kinetics in complex networks and an example application to microbial litter decomposition
journal, January 2013
- Tang, J. Y.; Riley, W. J.
- Biogeosciences, Vol. 10, Issue 12
Soil organic carbon pools in the northern circumpolar permafrost region: SOIL ORGANIC CARBON POOLS
journal, June 2009
- Tarnocai, C.; Canadell, J. G.; Schuur, E. A. G.
- Global Biogeochemical Cycles, Vol. 23, Issue 2
A pan-Arctic synthesis of CH 4 and CO 2 production from anoxic soil incubations
journal, March 2015
- Treat, Claire C.; Natali, Susan M.; Ernakovich, Jessica
- Global Change Biology, Vol. 21, Issue 7
Microbial modulators of soil carbon storage: integrating genomic and metabolic knowledge for global prediction
journal, December 2013
- Trivedi, Pankaj; Anderson, Ian C.; Singh, Brajesh K.
- Trends in Microbiology, Vol. 21, Issue 12
Metabolic and trophic interactions modulate methane production by Arctic peat microbiota in response to warming
journal, April 2015
- Tveit, Alexander Tøsdal; Urich, Tim; Frenzel, Peter
- Proceedings of the National Academy of Sciences, Vol. 112, Issue 19
The carbon we do not see—the impact of low molecular weight compounds on carbon dynamics and respiration in forest soils: a review
journal, January 2005
- van Hees, Patrick A. W.; Jones, David L.; Finlay, Roger
- Soil Biology and Biochemistry, Vol. 37, Issue 1
Variability of soil methane production on the micro-scale: spatial association with hot spots of organic material and Archaeal populations
journal, August 2000
- Wachinger, Gisela; Fiedler, Sabine; Zepp, Kornelia
- Soil Biology and Biochemistry, Vol. 32, Issue 8-9
Methanogenic activity and biomass in Holocene permafrost deposits of the Lena Delta, Siberian Arctic and its implication for the global methane budget
journal, May 2007
- Wagner, Dirk; Gattinger, Andreas; Embacher, Arndt
- Global Change Biology, Vol. 13, Issue 5
Molecular investigations into a globally important carbon pool: permafrost-protected carbon in Alaskan soils
journal, February 2010
- Waldrop, M. P.; Wickland, K. P.; White Iii, R.
- Global Change Biology
Seasonal variation in enzyme activities and temperature sensitivities in Arctic tundra soils
journal, July 2009
- Wallenstein, Matthew D.; Mcmahon, Shawna K.; Schimel, Joshua P.
- Global Change Biology, Vol. 15, Issue 7
Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys
journal, June 2011
- Werner, Jeffrey J.; Koren, Omry; Hugenholtz, Philip
- The ISME Journal, Vol. 6, Issue 1
Representing life in the Earth system with soil microbial functional traits in the MIMICS model
journal, January 2015
- Wieder, W. R.; Grandy, A. S.; Kallenbach, C. M.
- Geoscientific Model Development, Vol. 8, Issue 6
Plant-derived compounds stimulate the decomposition of organic matter in arctic permafrost soils
journal, May 2016
- Wild, Birgit; Gentsch, Norman; Čapek, Petr
- Scientific Reports, Vol. 6, Issue 1
A protocol for data exploration to avoid common statistical problems: Data exploration
journal, November 2009
- Zuur, Alain F.; Ieno, Elena N.; Elphick, Chris S.
- Methods in Ecology and Evolution, Vol. 1, Issue 1