skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Genome Sequence of a Staphylococcus xylosus Clinical Isolate, Strain SMA0341-04 (UGA5), from Siaya County Referral Hospital in Siaya, Kenya

Abstract

ABSTRACT We report here the genome sequence of a Staphylococcus xylosus clinical isolate, strain SMA0341-04 (UGA5), which contains one chromosome and at least one plasmid. Notably, strain SMA0341-04 (UGA5) contains the tetracycline efflux major facilitator superfamily (MFS) transporter ( tetK ) gene.

Authors:
; ; ; ; ; ; ; ORCiD logo; ; ; ; ; ; ;
Publication Date:
Sponsoring Org.:
USDOE
OSTI Identifier:
1507452
Resource Type:
Journal Article: Published Article
Journal Name:
Microbiology Resource Announcements
Additional Journal Information:
Journal Name: Microbiology Resource Announcements Journal Volume: 8 Journal Issue: 16; Journal ID: ISSN 2576-098X
Publisher:
American Society for Microbiology
Country of Publication:
United States
Language:
English

Citation Formats

Cheng, Qiuying, Xie, Gary, Daligault, Hajnalka, Davenport, Karen, Gleasner, Cheryl, Jacobs, Lindsey, Kubicek-Sutherland, Jessica, LeCuyer, Tessa, Otieno, Vincent, Raballah, Evans, Doggett, Norman, McMahon, Benjamin, Perkins, Douglas J., Mukundan, Harshini, and Dunning Hotopp, ed., Julie C. Genome Sequence of a Staphylococcus xylosus Clinical Isolate, Strain SMA0341-04 (UGA5), from Siaya County Referral Hospital in Siaya, Kenya. United States: N. p., 2019. Web. doi:10.1128/MRA.01625-18.
Cheng, Qiuying, Xie, Gary, Daligault, Hajnalka, Davenport, Karen, Gleasner, Cheryl, Jacobs, Lindsey, Kubicek-Sutherland, Jessica, LeCuyer, Tessa, Otieno, Vincent, Raballah, Evans, Doggett, Norman, McMahon, Benjamin, Perkins, Douglas J., Mukundan, Harshini, & Dunning Hotopp, ed., Julie C. Genome Sequence of a Staphylococcus xylosus Clinical Isolate, Strain SMA0341-04 (UGA5), from Siaya County Referral Hospital in Siaya, Kenya. United States. doi:10.1128/MRA.01625-18.
Cheng, Qiuying, Xie, Gary, Daligault, Hajnalka, Davenport, Karen, Gleasner, Cheryl, Jacobs, Lindsey, Kubicek-Sutherland, Jessica, LeCuyer, Tessa, Otieno, Vincent, Raballah, Evans, Doggett, Norman, McMahon, Benjamin, Perkins, Douglas J., Mukundan, Harshini, and Dunning Hotopp, ed., Julie C. Thu . "Genome Sequence of a Staphylococcus xylosus Clinical Isolate, Strain SMA0341-04 (UGA5), from Siaya County Referral Hospital in Siaya, Kenya". United States. doi:10.1128/MRA.01625-18.
@article{osti_1507452,
title = {Genome Sequence of a Staphylococcus xylosus Clinical Isolate, Strain SMA0341-04 (UGA5), from Siaya County Referral Hospital in Siaya, Kenya},
author = {Cheng, Qiuying and Xie, Gary and Daligault, Hajnalka and Davenport, Karen and Gleasner, Cheryl and Jacobs, Lindsey and Kubicek-Sutherland, Jessica and LeCuyer, Tessa and Otieno, Vincent and Raballah, Evans and Doggett, Norman and McMahon, Benjamin and Perkins, Douglas J. and Mukundan, Harshini and Dunning Hotopp, ed., Julie C.},
abstractNote = {ABSTRACT We report here the genome sequence of a Staphylococcus xylosus clinical isolate, strain SMA0341-04 (UGA5), which contains one chromosome and at least one plasmid. Notably, strain SMA0341-04 (UGA5) contains the tetracycline efflux major facilitator superfamily (MFS) transporter ( tetK ) gene.},
doi = {10.1128/MRA.01625-18},
journal = {Microbiology Resource Announcements},
issn = {2576-098X},
number = 16,
volume = 8,
place = {United States},
year = {2019},
month = {4}
}

Journal Article:
Free Publicly Available Full Text
Publisher's Version of Record at 10.1128/MRA.01625-18

Save / Share:

Works referenced in this record:

An Ergatis-based prokaryotic genome annotation web server
journal, March 2010


IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
journal, April 2012


Antibiotic resistance patterns of coagulase-negative staphylococcus strains isolated from blood cultures of septicemic patients in Turkey
journal, January 2009


Microbiological profile in Serra ewes' cheese during ripening
journal, July 1995


Isolation and Species Distribution of Staphylococci from Animal and Human Skin
journal, January 2002

  • Nagase, Naoko; Sasaki, Asako; Yamashita, Kenji
  • Journal of Veterinary Medical Science, Vol. 64, Issue 3
  • DOI: 10.1292/jvms.64.245

Coagulase-negative staphylococci (CNS) as an aetiological factor of mastitis in cows
journal, September 2013

  • Bochniarz, M.; Wawron, W.; Szczubiał, M.
  • Polish Journal of Veterinary Sciences, Vol. 16, Issue 3
  • DOI: 10.2478/pjvs-2013-0068

Viability of Staphylococcus xylosus isolated from artisanal sausages for application as starter cultures in meat products
journal, January 2009

  • Fiorentini, Ângela Maria; Sawitzki, Maristela Cortez; Bertol, Teresinha Marisa
  • Brazilian Journal of Microbiology, Vol. 40, Issue 1
  • DOI: 10.1590/S1517-83822009000100022

Multiresistance of Staphylococcus xylosus and Staphylococcus equorum from Slovak Bryndza cheese
journal, October 2013

  • Mikulášová, Mária; Valáriková, Jana; Dušinský, Roman
  • Folia Microbiologica, Vol. 59, Issue 3
  • DOI: 10.1007/s12223-013-0286-y

Identification and antibiotic susceptibility of coagulase negative staphylococci isolated in corneal/external infections
journal, July 1999

  • Pinna, A.; Zanetti, S.; Sotgiu, M.
  • British Journal of Ophthalmology, Vol. 83, Issue 7
  • DOI: 10.1136/bjo.83.7.771

Fast and accurate short read alignment with Burrows-Wheeler transform
journal, May 2009


Pebble and Rock Band: Heuristic Resolution of Repeats and Scaffolding in the Velvet Short-Read de Novo Assembler
journal, December 2009


Rapid evaluation and quality control of next generation sequencing data with FaQCs
journal, November 2014


Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
journal, February 2008


Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities
journal, March 1998


Base-Calling of Automated Sequencer Traces Using Phred.  I. Accuracy Assessment
journal, March 1998

  • Ewing, Brent; Hillier, LaDeana; Wendl, Michael C.
  • Genome Research, Vol. 8, Issue 3
  • DOI: 10.1101/gr.8.3.175

Consed: A Graphical Tool for Sequence Finishing
journal, March 1998

  • Gordon, David; Abajian, Chris; Green, Phil
  • Genome Research, Vol. 8, Issue 3
  • DOI: 10.1101/gr.8.3.195

The RAST Server: Rapid Annotations using Subsystems Technology
journal, January 2008

  • Aziz, Ramy K.; Bartels, Daniela; Best, Aaron A.
  • BMC Genomics, Vol. 9, Issue 1, Article No. 75
  • DOI: 10.1186/1471-2164-9-75

Identification of Staphylococcus xylosus Isolated from C57BL/6J- Nos2 tm1Lau Mice with Dermatitis
journal, September 2002