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Title: Staphylococcus epidermidis small basic protein (Sbp) forms amyloid fibrils, consistent with its function as a scaffolding protein in biofilms

Authors:
ORCiD logo; ; ; ; ORCiD logo; ; ; ; ORCiD logo
Publication Date:
Research Org.:
Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Org.:
FOREIGN
OSTI Identifier:
1502248
Resource Type:
Journal Article
Journal Name:
Journal of Biological Chemistry
Additional Journal Information:
Journal Volume: 293; Journal Issue: 37; Journal ID: ISSN 0021-9258
Publisher:
American Society for Biochemistry and Molecular Biology
Country of Publication:
United States
Language:
ENGLISH

Citation Formats

Wang, Yan, Jiang, Jingbo, Gao, Yachao, Sun, Yang, Dai, Jianfeng, Wu, Yang, Qu, Di, Ma, Gang, and Fang, Xianyang. Staphylococcus epidermidis small basic protein (Sbp) forms amyloid fibrils, consistent with its function as a scaffolding protein in biofilms. United States: N. p., 2018. Web. doi:10.1074/jbc.RA118.002448.
Wang, Yan, Jiang, Jingbo, Gao, Yachao, Sun, Yang, Dai, Jianfeng, Wu, Yang, Qu, Di, Ma, Gang, & Fang, Xianyang. Staphylococcus epidermidis small basic protein (Sbp) forms amyloid fibrils, consistent with its function as a scaffolding protein in biofilms. United States. doi:10.1074/jbc.RA118.002448.
Wang, Yan, Jiang, Jingbo, Gao, Yachao, Sun, Yang, Dai, Jianfeng, Wu, Yang, Qu, Di, Ma, Gang, and Fang, Xianyang. Thu . "Staphylococcus epidermidis small basic protein (Sbp) forms amyloid fibrils, consistent with its function as a scaffolding protein in biofilms". United States. doi:10.1074/jbc.RA118.002448.
@article{osti_1502248,
title = {Staphylococcus epidermidis small basic protein (Sbp) forms amyloid fibrils, consistent with its function as a scaffolding protein in biofilms},
author = {Wang, Yan and Jiang, Jingbo and Gao, Yachao and Sun, Yang and Dai, Jianfeng and Wu, Yang and Qu, Di and Ma, Gang and Fang, Xianyang},
abstractNote = {},
doi = {10.1074/jbc.RA118.002448},
journal = {Journal of Biological Chemistry},
issn = {0021-9258},
number = 37,
volume = 293,
place = {United States},
year = {2018},
month = {7}
}

Works referenced in this record:

Uniqueness of ab initio shape determination in small-angle scattering
journal, April 2003

  • Volkov, Vladimir V.; Svergun, Dmitri I.
  • Journal of Applied Crystallography, Vol. 36, Issue 3, p. 860-864
  • DOI: 10.1107/S0021889803000268

Structural basis of Staphylococcus epidermidis biofilm formation: mechanisms and molecular interactions
journal, February 2015

  • Büttner, Henning; Mack, Dietrich; Rohde, Holger
  • Frontiers in Cellular and Infection Microbiology, Vol. 5
  • DOI: 10.3389/fcimb.2015.00014

Role of Surface Protein SasG in Biofilm Formation by Staphylococcus aureus
journal, September 2010

  • Geoghegan, J. A.; Corrigan, R. M.; Gruszka, D. T.
  • Journal of Bacteriology, Vol. 192, Issue 21
  • DOI: 10.1128/JB.00628-10

Determination of the regularization parameter in indirect-transform methods using perceptual criteria
journal, August 1992


Immunoprophylaxis and immunotherapy of Staphylococcus epidermidis infections: challenges and prospects
journal, January 2012

  • Van Mellaert, Lieve; Shahrooei, Mohammad; Hofmans, Dorien
  • Expert Review of Vaccines, Vol. 11, Issue 3
  • DOI: 10.1586/erv.11.190

PRIMUS: a Windows PC-based system for small-angle scattering data analysis
journal, September 2003

  • Konarev, Petr V.; Volkov, Vladimir V.; Sokolova, Anna V.
  • Journal of Applied Crystallography, Vol. 36, Issue 5, p. 1277-1282
  • DOI: 10.1107/S0021889803012779

A Method for Helical RNA Global Structure Determination in Solution Using Small-Angle X-Ray Scattering and NMR Measurements
journal, October 2009


Structural Characterization of Intrinsically Disordered Proteins by NMR Spectroscopy
journal, September 2013


Staphylococcal Bap Proteins Build Amyloid Scaffold Biofilm Matrices in Response to Environmental Signals
journal, June 2016


Gene replacement in Staphylococcus carnosus and Staphylococcus xylosus
journal, June 1997


The I-TASSER Suite: protein structure and function prediction
journal, December 2014

  • Yang, Jianyi; Yan, Renxiang; Roy, Ambrish
  • Nature Methods, Vol. 12, Issue 1
  • DOI: 10.1038/nmeth.3213

Macroscopic amyloid fiber formation by staphylococcal biofilm associated SuhB protein
journal, October 2016


ATR-FTIR: A “rejuvenated” tool to investigate amyloid proteins
journal, October 2013

  • Sarroukh, Rabia; Goormaghtigh, Erik; Ruysschaert, Jean-Marie
  • Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1828, Issue 10
  • DOI: 10.1016/j.bbamem.2013.04.012

Functional amyloid in Pseudomonas: Functional amyloid in Pseudomonas
journal, July 2010


Structural basis for Zn2+-dependent intercellular adhesion in staphylococcal biofilms
journal, December 2012

  • Conrady, D. G.; Wilson, J. J.; Herr, A. B.
  • Proceedings of the National Academy of Sciences, Vol. 110, Issue 3
  • DOI: 10.1073/pnas.1208134110

The significance of infection related to orthopedic devices and issues of antibiotic resistance
journal, April 2006


Structure and membrane orientation of IAPP in its natively amidated form at physiological pH in a membrane environment
journal, October 2011

  • Nanga, Ravi Prakash Reddy; Brender, Jeffrey R.; Vivekanandan, Subramanian
  • Biochimica et Biophysica Acta (BBA) - Biomembranes, Vol. 1808, Issue 10
  • DOI: 10.1016/j.bbamem.2011.06.012

The biofilm matrix
journal, August 2010

  • Flemming, Hans-Curt; Wingender, Jost
  • Nature Reviews Microbiology, Vol. 8, Issue 9
  • DOI: 10.1038/nrmicro2415

A zinc-dependent adhesion module is responsible for intercellular adhesion in staphylococcal biofilms
journal, December 2008

  • Conrady, D. G.; Brescia, C. C.; Horii, K.
  • Proceedings of the National Academy of Sciences, Vol. 105, Issue 49
  • DOI: 10.1073/pnas.0807717105

Functional amyloid formation by Streptococcus mutans
journal, October 2012


An 18 kDa Scaffold Protein Is Critical for Staphylococcus epidermidis Biofilm Formation
journal, March 2015


Phosphatidylethanolamine Enhances Amyloid Fiber-Dependent Membrane Fragmentation
journal, September 2012

  • Sciacca, Michele F. M.; Brender, Jeffrey R.; Lee, Dong-Kuk
  • Biochemistry, Vol. 51, Issue 39
  • DOI: 10.1021/bi3009888

Accumulation-Associated Protein Enhances Staphylococcus epidermidis Biofilm Formation under Dynamic Conditions and Is Required for Infection in a Rat Catheter Model
journal, October 2014

  • Schaeffer, Carolyn R.; Woods, Keith M.; Longo, G. Matt
  • Infection and Immunity, Vol. 83, Issue 1
  • DOI: 10.1128/IAI.02177-14

Amyloidogenic determinants are usually not buried
journal, January 2009

  • Frousios, Kimon K.; Iconomidou, Vassiliki A.; Karletidi, Carolina-Maria
  • BMC Structural Biology, Vol. 9, Issue 1
  • DOI: 10.1186/1472-6807-9-44

Microbial manipulation of the amyloid fold
journal, November 2012


Self-assembled amyloid fibrils with controllable conformational heterogeneity
journal, November 2015

  • Lee, Gyudo; Lee, Wonseok; Lee, Hyungbeen
  • Scientific Reports, Vol. 5, Issue 1
  • DOI: 10.1038/srep16220

AgfC and AgfE facilitate extracellular thin aggregative fimbriae synthesis in Salmonella Enteritidis
journal, April 2007


Amyloid fibers provide structural integrity to Bacillus subtilis biofilms
journal, January 2010

  • Romero, D.; Aguilar, C.; Losick, R.
  • Proceedings of the National Academy of Sciences, Vol. 107, Issue 5
  • DOI: 10.1073/pnas.0910560107

The emerging concept of functional amyloid
journal, March 2009


Identification of Key Amino Acid Residues Modulating Intracellular and In vitro Microcin E492 Amyloid Formation
journal, January 2016

  • Aguilera, Paulina; Marcoleta, Andrés; Lobos-Ruiz, Pablo
  • Frontiers in Microbiology, Vol. 7
  • DOI: 10.3389/fmicb.2016.00035

Biofilm Matrix Proteins
journal, April 2015


Amyloid Structures as Biofilm Matrix Scaffolds
journal, May 2016

  • Taglialegna, Agustina; Lasa, Iñigo; Valle, Jaione
  • Journal of Bacteriology, Vol. 198, Issue 19
  • DOI: 10.1128/JB.00122-16

Protein-based biofilm matrices in Staphylococci
journal, December 2014

  • Speziale, Pietro; Pietrocola, Giampiero; Foster, Timothy J.
  • Frontiers in Cellular and Infection Microbiology, Vol. 4
  • DOI: 10.3389/fcimb.2014.00171

Automated matching of high- and low-resolution structural models
journal, February 2001


Functional Amyloids Composed of Phenol Soluble Modulins Stabilize Staphylococcus aureus Biofilms
journal, June 2012


Determination of the molecular weight of proteins in solution from a single small-angle X-ray scattering measurement on a relative scale
journal, December 2009

  • Fischer, H.; de Oliveira Neto, M.; Napolitano, H. B.
  • Journal of Applied Crystallography, Vol. 43, Issue 1
  • DOI: 10.1107/S0021889809043076

NMRPipe: A multidimensional spectral processing system based on UNIX pipes
journal, November 1995

  • Delaglio, Frank; Grzesiek, Stephan; Vuister, GeertenW.
  • Journal of Biomolecular NMR, Vol. 6, Issue 3
  • DOI: 10.1007/BF00197809

IsdC from Staphylococcus lugdunensis Induces Biofilm Formation under Low-Iron Growth Conditions
journal, March 2014

  • Missineo, A.; Di Poto, A.; Geoghegan, J. A.
  • Infection and Immunity, Vol. 82, Issue 6
  • DOI: 10.1128/IAI.01542-14

Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law
journal, April 2011

  • Rambo, Robert P.; Tainer, John A.
  • Biopolymers, Vol. 95, Issue 8
  • DOI: 10.1002/bip.21638

Staphylococcus epidermidis — the 'accidental' pathogen
journal, August 2009


Protein Misfolding, Functional Amyloid, and Human Disease
journal, June 2006


SdrC induces staphylococcal biofilm formation through a homophilic interaction: SdrC induces staphylococcal biofilm formation
journal, September 2014

  • Barbu, E. Magda; Mackenzie, Chris; Foster, Timothy J.
  • Molecular Microbiology, Vol. 94, Issue 1
  • DOI: 10.1111/mmi.12750

The Role of Functional Amyloids in Multicellular Growth and Development of Gram-Positive Bacteria
journal, August 2017

  • Dragoš, Anna; Kovács, Ákos T.; Claessen, Dennis
  • Biomolecules, Vol. 7, Issue 4
  • DOI: 10.3390/biom7030060

Accurate assessment of mass, models and resolution by small-angle scattering
journal, April 2013


Predicting the aggregation propensity of prion sequences
journal, September 2015


Scalable web services for the PSIPRED Protein Analysis Workbench
journal, June 2013

  • Buchan, Daniel W. A.; Minneci, Federico; Nugent, Tim C. O.
  • Nucleic Acids Research, Vol. 41, Issue W1
  • DOI: 10.1093/nar/gkt381

Using circular dichroism spectra to estimate protein secondary structure
journal, January 2007