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Title: WHONDRS Surface Water Sampling for Metabolite Biogeography

Abstract

This dataset is from a global survey of surface water metabolites to provide understanding of the character of organic carbon that may be delivered to subsurface sediments via hydrologic exchange. To implement the global survey, free stream sampling kits were provided to interested researchers throughout the world. Samples were collected with minimal constraints in terms of location, but following strict protocols, and shipped to the Environmental Molecular Sciences Laboratory (EMSL) for metabolomic analysis via Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). In addition, basic geochemistry analyses (e.g., dissolved organic carbon concentration, cations, anions) were conducted, standardized photos of each field system were taken, surface water hydrographs were collated from existing instrumentation, and extensive metadata were captured. All data types are provided in a standard format. In addition, the data package contains an R function that will launch a GUI that can be used to easily search, compile, and download data. The data are free to be used for any purpose, such as for manuscripts, presentations, and grant proposals. Please use the data package's DOI to cite the data package. Note that individual hydrographs have separate DOIs, which are provided in the associated hydrograph files. These hydrograph-specific DOIs should alsomore » be cited when using those data. We ask that you email us at WHONDRS@pnnl.gov to let us know that you're using the data and acknowledge WHONDRS and the U.S. Department of Energy's Subsurface Biogeochemical Research program-which generously provides funding to WHONDRS-in your documents, presentations, etc. There is no obligation to include WHONDRS members as co-authors.« less

Authors:
 [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [1];  [2];  [1];  [1];  [1];  [1];  [3];  [4] more »;  [4];  [5];  [6];  [7];  [5];  [5];  [8] « less
  1. Pacific Northwest National Laboratory (PNNL)
  2. University of Arizona/Pacific Northwest National Laboratory
  3. Oak Ridge National Laboratory
  4. Lawrence Berkeley National Laboratory
  5. University of Cincinnati
  6. Washington State University
  7. The Ohio State University
  8. University of Texas at Austin
Publication Date:
Research Org.:
Environmental System Science Data Infrastructure for a Virtual Ecosystem; Worldwide Hydrobiogeochemistry Observation Network for Dynamic River Systems (WHONDRS)
Sponsoring Org.:
U.S. DOE > Office of Science > Biological and Environmental Research (BER) > Subsurface Biogeochemical Research (SBR)
OSTI Identifier:
1484811
Report Number(s):
S000001; S000002; S000003; S000004; S000005; S000006; S000007; S000008; S000009; S000012; S000014; S000022; S000023; S000030; S000035; S000036; S000044; S000045; S000054; S000055; S000056; S000059; S000060; S000063; S000073
DOE Contract Number:  
DOE Award #54737
Resource Type:
Data
Data Type:
Specialized Mix
Country of Publication:
United States
Language:
English
Subject:
54 ENVIRONMENTAL SCIENCES; WHONDRS; Watershed; River Corridor; Biogeochemistry; Hydrology; River; Stream; Carbon; FTICR; Cations; Anions; Dissolved organic matter; Dissolved organic carbon; Metabolite; Metabolomics; Mass spectrometry; Hydrograph; River variation; EARTH SCIENCE > TERRESTRIAL HYDROSPHERE > SURFACE WATER; pH; SpC; Phosphorus; Fluoride; Chloride; Sulfate; Nitrite; Nitrate; Total nitrogen; NPOC; Sodium; Calcium; Magnesium; Potassium; Iron; Temperature; Discharge; Gauge height

Citation Formats

Stegen, James C, Goldman, Amy E, Blackburn, Shannon E, Chu, Rosalie K, Danczak, Robert E, Garayburu-Caruso, Vanessa A, Graham, Emily B, Grieshauber, Casey, Lin, Xinming, Morad, Joseph W, Ren, Huiying, Renteria, Lupita, Resch, Charles T, Tfaily, Malak, Tolic, Nikola, Toyoda, Jason G, Wells, Jacqueline R, Znotinas, Katherine R, Brooks, Scott C, Bouskill, Nicholas J, Newcomer, Michelle, Rowe, Annette R, Saify, Alifya, Smith, Garrett, Soltanian, Mohamad Reza, Trustschel, Leah R, and Turetcaia, Anna. WHONDRS Surface Water Sampling for Metabolite Biogeography. United States: N. p., 2018. Web. doi:10.15485/1484811.
Stegen, James C, Goldman, Amy E, Blackburn, Shannon E, Chu, Rosalie K, Danczak, Robert E, Garayburu-Caruso, Vanessa A, Graham, Emily B, Grieshauber, Casey, Lin, Xinming, Morad, Joseph W, Ren, Huiying, Renteria, Lupita, Resch, Charles T, Tfaily, Malak, Tolic, Nikola, Toyoda, Jason G, Wells, Jacqueline R, Znotinas, Katherine R, Brooks, Scott C, Bouskill, Nicholas J, Newcomer, Michelle, Rowe, Annette R, Saify, Alifya, Smith, Garrett, Soltanian, Mohamad Reza, Trustschel, Leah R, & Turetcaia, Anna. WHONDRS Surface Water Sampling for Metabolite Biogeography. United States. doi:10.15485/1484811.
Stegen, James C, Goldman, Amy E, Blackburn, Shannon E, Chu, Rosalie K, Danczak, Robert E, Garayburu-Caruso, Vanessa A, Graham, Emily B, Grieshauber, Casey, Lin, Xinming, Morad, Joseph W, Ren, Huiying, Renteria, Lupita, Resch, Charles T, Tfaily, Malak, Tolic, Nikola, Toyoda, Jason G, Wells, Jacqueline R, Znotinas, Katherine R, Brooks, Scott C, Bouskill, Nicholas J, Newcomer, Michelle, Rowe, Annette R, Saify, Alifya, Smith, Garrett, Soltanian, Mohamad Reza, Trustschel, Leah R, and Turetcaia, Anna. Mon . "WHONDRS Surface Water Sampling for Metabolite Biogeography". United States. doi:10.15485/1484811. https://www.osti.gov/servlets/purl/1484811.
@article{osti_1484811,
title = {WHONDRS Surface Water Sampling for Metabolite Biogeography},
author = {Stegen, James C and Goldman, Amy E and Blackburn, Shannon E and Chu, Rosalie K and Danczak, Robert E and Garayburu-Caruso, Vanessa A and Graham, Emily B and Grieshauber, Casey and Lin, Xinming and Morad, Joseph W and Ren, Huiying and Renteria, Lupita and Resch, Charles T and Tfaily, Malak and Tolic, Nikola and Toyoda, Jason G and Wells, Jacqueline R and Znotinas, Katherine R and Brooks, Scott C and Bouskill, Nicholas J and Newcomer, Michelle and Rowe, Annette R and Saify, Alifya and Smith, Garrett and Soltanian, Mohamad Reza and Trustschel, Leah R and Turetcaia, Anna},
abstractNote = {This dataset is from a global survey of surface water metabolites to provide understanding of the character of organic carbon that may be delivered to subsurface sediments via hydrologic exchange. To implement the global survey, free stream sampling kits were provided to interested researchers throughout the world. Samples were collected with minimal constraints in terms of location, but following strict protocols, and shipped to the Environmental Molecular Sciences Laboratory (EMSL) for metabolomic analysis via Fourier transform ion cyclotron resonance mass spectrometry (FTICR-MS). In addition, basic geochemistry analyses (e.g., dissolved organic carbon concentration, cations, anions) were conducted, standardized photos of each field system were taken, surface water hydrographs were collated from existing instrumentation, and extensive metadata were captured. All data types are provided in a standard format. In addition, the data package contains an R function that will launch a GUI that can be used to easily search, compile, and download data. The data are free to be used for any purpose, such as for manuscripts, presentations, and grant proposals. Please use the data package's DOI to cite the data package. Note that individual hydrographs have separate DOIs, which are provided in the associated hydrograph files. These hydrograph-specific DOIs should also be cited when using those data. We ask that you email us at WHONDRS@pnnl.gov to let us know that you're using the data and acknowledge WHONDRS and the U.S. Department of Energy's Subsurface Biogeochemical Research program-which generously provides funding to WHONDRS-in your documents, presentations, etc. There is no obligation to include WHONDRS members as co-authors.},
doi = {10.15485/1484811},
journal = {},
number = ,
volume = ,
place = {United States},
year = {Mon Nov 26 00:00:00 EST 2018},
month = {Mon Nov 26 00:00:00 EST 2018}
}

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