Polarizable Atomic Multipole-Based Molecular Mechanics for Organic Molecules
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August 2011 |
A simple polarizable model of water based on classical Drude oscillators
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Polarization effects in molecular mechanical force fields
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Curvy-steps approach to constraint-free extended-Lagrangian ab initio molecular dynamics, using atom-centered basis functions: Convergence toward Born–Oppenheimer trajectories
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Ab initio molecular dynamics: Analytically continued energy functionals and insights into iterative solutions
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Current Status of the AMOEBA Polarizable Force Field
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Systematic Parametrization of Polarizable Force Fields from Quantum Chemistry Data
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November 2012 |
Self-consistent first-principles technique with linear scaling
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Special Issue on Polarization
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October 2007 |
Polarizable Atomic Multipole Water Model for Molecular Mechanics Simulation
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May 2003 |
Linear scaling conjugate gradient density matrix search as an alternative to diagonalization for first principles electronic structure calculations
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Including dispersion interactions in the ONETEP program for linear-scaling density functional theory calculations
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December 2008 |
Ab initio molecular dynamics: Propagating the density matrix with Gaussian orbitals
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June 2001 |
Fock matrix dynamics
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March 2004 |
Revised Parameters for the AMOEBA Polarizable Atomic Multipole Water Model
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September 2014 |
An effective fragment method for modeling solvent effects in quantum mechanical calculations
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August 1996 |
Generalized extended Lagrangian Born-Oppenheimer molecular dynamics
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Accurate ionic forces and geometry optimization in linear-scaling density-functional theory with local orbitals
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May 2011 |
Geometric integration in Born-Oppenheimer molecular dynamics
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December 2011 |
Density-functional exchange-energy approximation with correct asymptotic behavior
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September 1988 |
Stable and Efficient Linear Scaling First-Principles Molecular Dynamics for 10000+ Atoms
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November 2014 |
Linear-scaling symmetric square-root decomposition of the overlap matrix
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March 2007 |
Density functional tight binding
- Elstner, Marcus; Seifert, Gotthard
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Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 372, Issue 2011
https://doi.org/10.1098/rsta.2012.0483
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Advanced Potential Energy Surfaces for Condensed Phase Simulation
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April 2014 |
Nearsightedness of electronic matter
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August 2005 |
TINKTEP: A fully self-consistent, mutually polarizable QM/MM approach based on the AMOEBA force field
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September 2016 |
Introducing ONETEP : Linear-scaling density functional simulations on parallel computers
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February 2005 |
An efficient and stable hybrid extended Lagrangian/self-consistent field scheme for solving classical mutual induction
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November 2015 |
Development of a polarizable force field for proteins via ab initio quantum chemistry: First generation model and gas phase tests
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October 2002 |
Consistent treatment of inter- and intramolecular polarization in molecular mechanics calculations
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October 2002 |
Daubechies wavelets for linear scaling density functional theory
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May 2014 |
Accelerated, energy-conserving Born–Oppenheimer molecular dynamics via Fock matrix extrapolation
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January 2005 |
Molecular dynamics simulations at constant pressure and/or temperature
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February 1980 |
Structure and Dynamics of Liquid Water from ab Initio Molecular Dynamics—Comparison of BLYP, PBE, and revPBE Density Functionals with and without van der Waals Corrections
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March 2012 |
Molecular mechanical models for organic and biological systems going beyond the atom centered two body additive approximation: aqueous solution free energies of methanol and N-methyl acetamide, nucleic acid base, and amide hydrogen bonding and chloroform/water partition coefficients of the nucleic acid bases
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July 2001 |
A molecular dynamics method for simulations in the canonical ensemble
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January 2002 |
Molecular dynamics without effective potentials via the Car-Parrinello approach
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August 1990 |
The individual and collective effects of exact exchange and dispersion interactions on the ab initio structure of liquid water
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August 2014 |
Extended Lagrangian Born–Oppenheimer molecular dynamics with dissipation
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June 2009 |
Calculation of the Free Energy of Polarization: Quantifying the Effect of Explicitly Treating Electronic Polarization on the Transferability of Force-Field Parameters
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June 2007 |
Network equilibration and first-principles liquid water
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January 2004 |
Polarizable Atomic Multipole-Based AMOEBA Force Field for Proteins
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August 2013 |
ONETEP: linear-scaling density-functional theory with plane-waves
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February 2006 |
Recent progress in linear scaling ab initio electronic structure techniques
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March 2002 |
Hybrid atomistic simulation methods for materials systems
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January 2009 |
Molecular and Atomic Polarizabilities: Thole's Model Revisited
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April 1998 |
Efficient treatment of induced dipoles
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August 2015 |
ReaxFF: A Reactive Force Field for Hydrocarbons
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October 2001 |
Enhanced semiempirical QM methods for biomolecular interactions
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January 2015 |
New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations
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March 1999 |
Polymorphic transitions in single crystals: A new molecular dynamics method
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December 1981 |
A NEMO potential that includes the dipole-quadrupole and quadrupole-quadrupole polarizability
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January 2010 |
Ab initio calculation of force constants and equilibrium geometries in polyatomic molecules : I. Theory
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January 1969 |
Pulay forces from localized orbitals optimized in situ using a psinc basis set
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June 2012 |
Molecular dynamics simulations of biomolecules
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September 2002 |
Electronic-structure calculations and molecular-dynamics simulations with linear system-size scaling
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August 1994 |
Semiempirical GGA-type density functional constructed with a long-range dispersion correction
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January 2006 |
Local structure analysis in ab initio liquid water
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July 2015 |
Fast evaluation of polarizable forces
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October 2005 |
Efficient recursion method for inverting an overlap matrix
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October 2001 |
Development of transferable interaction models for water. IV. A flexible, all-atom polarizable potential (TTM2-F) based on geometry dependent charges derived from an ab initio monomer dipole moment surface
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January 2002 |
Development of a Polarizable Force Field Using Multiple Fluctuating Charges per Atom
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February 2010 |
Explicit reversible integrators for extended systems dynamics
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April 1996 |
Density kernel optimization in the ONETEP code
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June 2008 |
Cutoff Errors in the Ewald Summation Formulae for Point Charge Systems
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January 1992 |
Evaluating Parametrization Protocols for Hydration Free Energy Calculations with the AMOEBA Polarizable Force Field
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July 2016 |
Systematic Improvement of a Classical Molecular Model of Water
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August 2013 |
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
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January 1988 |
Perspective: How good is DFT for water?
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April 2016 |
Building Force Fields: An Automatic, Systematic, and Reproducible Approach
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May 2014 |
RETRACTED ARTICLE: ONETEP: linear-scaling density-functional theory with plane-waves
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June 2007 |
A molecular dynamics method for simulations in the canonical ensemble
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June 1984 |
New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations
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text
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January 1999 |
Structure and dynamics of liquid water from ab initio molecular dynamics-comparison of BLYP, PBE, and revPBE density functionals with and without van der Waals corrections
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text
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January 2012 |
Ab initio calculation of force constants and equilibrium geometries in polyatomic molecules: II. Force constants of water
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April 1970 |
Extended Lagrangian Born–Oppenheimer molecular dynamics with dissipation
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text
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January 2009 |
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
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text
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January 1988 |
The Individual and Collective Effects of Exact Exchange and Dispersion Interactions on the Ab Initio Structure of Liquid Water
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text
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January 2014 |
Generalized Extended Lagrangian Born-Oppenheimer Molecular Dynamics
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text
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January 2014 |
Local Structure Analysis in $Ab$ $Initio$ Liquid Water
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text
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January 2015 |
Efficient Recursion Method for Inverting Overlap Matrix
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text
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January 2001 |
Network equilibration and first-principles liquid water
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text
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January 2004 |
Nearsightedness of Electronic Matter
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text
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January 2005 |
Electronic structure calculations and molecular dynamics simulations with linear system-size scaling
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January 1994 |