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Title: Excitonic Energy Landscape of the Y16F Mutant of the Chlorobium tepidum Fenna–Matthews–Olson (FMO) Complex: High Resolution Spectroscopic and Modeling Studies

Abstract

We report high-resolution (low-temperature) absorption, emission, and nonresonant/resonant hole-burned (HB) spectra and results of excitonic calculations using a non-Markovian reduced density matrix theory (with an improved algorithm for parameter optimization in heterogeneous samples) obtained for the Y16F mutant of the Fenna–Matthews–Olson (FMO) trimer from the green sulfur bacterium Chlorobium tepidum. We show that the Y16F mutant is a mixture of FMO complexes with three independent low-energy traps (located near 817, 821, and 826 nm), in agreement with measured composite emission and HB spectra. Two of these traps belong to mutated FMO subpopulations characterized by significantly modified low-energy excitonic states. Hamiltonians for the two major subpopulations (Sub821 and Sub817) provide new insight into extensive changes induced by the single-point mutation in the vicinity of BChl 3 (where tyrosine Y16 was replaced with phenylalanine F16). The average decay time(s) from the higher exciton state(s) in the Y16F mutant depends on frequency and occurs on a picosecond time scale.

Authors:
 [1];  [2];  [2]; ORCiD logo [3]
  1. Kansas State Univ., Manhattan, KS (United States). Dept. of Chemistry
  2. Washington Univ., St. Louis, MO (United States). Dept. of Biology and Chemistry
  3. Kansas State Univ., Manhattan, KS (United States). Dept. of Chemistry, and Dept. of Physics
Publication Date:
Research Org.:
Energy Frontier Research Centers (EFRC) (United States). Photosynthetic Antenna Research Center (PARC)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1470597
Grant/Contract Number:  
SC0001035
Resource Type:
Journal Article: Accepted Manuscript
Journal Name:
Journal of Physical Chemistry. B, Condensed Matter, Materials, Surfaces, Interfaces and Biophysical Chemistry
Additional Journal Information:
Journal Volume: 122; Journal Issue: 14; Related Information: PARC partners with Washington University in St. Louis (lead); University of California, Riverside; University of Glasgow, UK; Los Alamos National Laboratory; University of New Mexico; New Mexico Corsortium; North Carolina State University; Northwestern University; Oak Ridge National Laboratory; University of Pennsylvania; Sandia National Laboratories; University of Sheffield, UK; Journal ID: ISSN 1520-6106
Publisher:
American Chemical Society
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; solar (fuels); photosynthesis (natural and artificial); biofuels (including algae and biomass); bio-inspired; charge transport; membrane; synthesis (novel materials); synthesis (self-assembly)

Citation Formats

Khmelnitskiy, Anton, Saer, Rafael G., Blankenship, Robert E., and Jankowiak, Ryszard. Excitonic Energy Landscape of the Y16F Mutant of the Chlorobium tepidum Fenna–Matthews–Olson (FMO) Complex: High Resolution Spectroscopic and Modeling Studies. United States: N. p., 2018. Web. doi:10.1021/acs.jpcb.7b11763.
Khmelnitskiy, Anton, Saer, Rafael G., Blankenship, Robert E., & Jankowiak, Ryszard. Excitonic Energy Landscape of the Y16F Mutant of the Chlorobium tepidum Fenna–Matthews–Olson (FMO) Complex: High Resolution Spectroscopic and Modeling Studies. United States. https://doi.org/10.1021/acs.jpcb.7b11763
Khmelnitskiy, Anton, Saer, Rafael G., Blankenship, Robert E., and Jankowiak, Ryszard. 2018. "Excitonic Energy Landscape of the Y16F Mutant of the Chlorobium tepidum Fenna–Matthews–Olson (FMO) Complex: High Resolution Spectroscopic and Modeling Studies". United States. https://doi.org/10.1021/acs.jpcb.7b11763. https://www.osti.gov/servlets/purl/1470597.
@article{osti_1470597,
title = {Excitonic Energy Landscape of the Y16F Mutant of the Chlorobium tepidum Fenna–Matthews–Olson (FMO) Complex: High Resolution Spectroscopic and Modeling Studies},
author = {Khmelnitskiy, Anton and Saer, Rafael G. and Blankenship, Robert E. and Jankowiak, Ryszard},
abstractNote = {We report high-resolution (low-temperature) absorption, emission, and nonresonant/resonant hole-burned (HB) spectra and results of excitonic calculations using a non-Markovian reduced density matrix theory (with an improved algorithm for parameter optimization in heterogeneous samples) obtained for the Y16F mutant of the Fenna–Matthews–Olson (FMO) trimer from the green sulfur bacterium Chlorobium tepidum. We show that the Y16F mutant is a mixture of FMO complexes with three independent low-energy traps (located near 817, 821, and 826 nm), in agreement with measured composite emission and HB spectra. Two of these traps belong to mutated FMO subpopulations characterized by significantly modified low-energy excitonic states. Hamiltonians for the two major subpopulations (Sub821 and Sub817) provide new insight into extensive changes induced by the single-point mutation in the vicinity of BChl 3 (where tyrosine Y16 was replaced with phenylalanine F16). The average decay time(s) from the higher exciton state(s) in the Y16F mutant depends on frequency and occurs on a picosecond time scale.},
doi = {10.1021/acs.jpcb.7b11763},
url = {https://www.osti.gov/biblio/1470597}, journal = {Journal of Physical Chemistry. B, Condensed Matter, Materials, Surfaces, Interfaces and Biophysical Chemistry},
issn = {1520-6106},
number = 14,
volume = 122,
place = {United States},
year = {Mon Mar 19 00:00:00 EDT 2018},
month = {Mon Mar 19 00:00:00 EDT 2018}
}

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Works referenced in this record:

Exciton Simulations of Optical Spectra of the FMO Complex from the Green Sulfur Bacterium Chlorobium tepidum at 6 K
journal, November 1998


Effect of Spectral Density Shapes on the Excitonic Structure and Dynamics of the Fenna–Matthews–Olson Trimer from Chlorobaculum tepidum
journal, August 2016


How Proteins Trigger Excitation Energy Transfer in the FMO Complex of Green Sulfur Bacteria
journal, October 2006


Exciton Analysis in 2D Electronic Spectroscopy
journal, June 2005


Theory and Simulation of the Environmental Effects on FMO Electronic Transitions
journal, June 2011


Energy landscape of the intact and destabilized FMO antennas from C. tepidum and the L122Q mutant: Low temperature spectroscopy and modeling study
journal, March 2018


Chlorosome antenna complexes from green photosynthetic bacteria
journal, June 2013


Crystal structure of the bacteriochlorophyll a protein from Chlorobium tepidum 1 1Edited by R. Huber
journal, August 1997


Chemical oxidation of the FMO antenna protein from Chlorobaculum tepidum
journal, July 2013


On the Controversial Nature of the 825 nm Exciton Band in the FMO Protein Complex
journal, March 2014


On destabilization of the Fenna–Matthews–Olson complex of Chlorobaculum tepidum
journal, March 2014


Probing the excitonic landscape of the Chlorobaculum tepidum Fenna-Matthews-Olson (FMO) complex: a mutagenesis approach
journal, April 2017


Membrane orientation of the FMO antenna protein from Chlorobaculum tepidum as determined by mass spectrometry-based footprinting
journal, April 2009


The Eighth Bacteriochlorophyll Completes the Excitation Energy Funnel in the FMO Protein
journal, December 2010


 -Helices direct excitation energy flow in the Fenna Matthews Olson protein
journal, October 2007


Absence of Quantum Oscillations and Dependence on Site Energies in Electronic Excitation Transfer in the Fenna–Matthews–Olson Trimer
journal, October 2011


Perturbation of bacteriochlorophyll molecules in Fenna–Matthews–Olson protein complexes through mutagenesis of cysteine residues
journal, September 2016


Ultrafast Spectroscopic Investigation of Energy Transfer in Site-Directed Mutants of the Fenna–Matthews–Olson (FMO) Antenna Complex from Chlorobaculum tepidum
journal, April 2017


The Theory of Relaxation Processes
book, January 1965


On the Theory of Relaxation Processes
journal, January 1957


Evidence for a cysteine-mediated mechanism of excitation energy regulation in a photosynthetic antenna complex
journal, June 2016


Spectroscopic Study of the CP43′ Complex and the PSI–CP43′ Supercomplex of the Cyanobacterium Synechocystis PCC 6803
journal, November 2011


On the Shape of the Phonon Spectral Density in Photosynthetic Complexes
journal, June 2013


How the molecular structure determines the flow of excitation energy in plant light-harvesting complex II
journal, August 2011


A Simplex Method for Function Minimization
journal, January 1965


Fluorescence-excitation and Emission Spectroscopy on Single FMO Complexes
journal, August 2016


Conformational Complexity in the LH2 Antenna of the Purple Sulfur Bacterium Allochromatium vinosum Revealed by Hole-Burning Spectroscopy
journal, June 2017


Correlated intermolecular coupling fluctuations in photosynthetic complexes
journal, February 2012


Toward Ab Initio Optical Spectroscopy of the Fenna–Matthews–Olson Complex
journal, November 2013


Spectral Hole Burning and Fluorescence Line Narrowing in Subunits of the Light-Harvesting Complex LH1 of Purple Bacteria
journal, November 1999


Modeling of Resonant Hole-Burning Spectra in Excitonically Coupled Systems: The Effects of Energy-Transfer Broadening
journal, October 2011


Hole-Burning Spectroscopy on Excitonically Coupled Pigments in Proteins: Theory Meets Experiment
journal, February 2016


Spectroscopic Study of the Light-Harvesting CP29 Antenna Complex of Photosystem II—Part I
journal, May 2013


Direct observation of tiers in the energy landscape of a chromoprotein: A single-molecule study
journal, December 2003


Spectral hole-burning spectroscopy in amorphous molecular solids and proteins
journal, June 1993


Exciton Structure and Energy Transfer in the Fenna–Matthews–Olson Complex
journal, April 2016