Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution
Abstract
The evolution of cell-adhesion mechanisms in animals facilitated the assembly of organized multicellular tissues. Studies in traditional animal models have revealed two predominant adhesion structures, the adherens junction (AJ) and focal adhesions (FAs), which are involved in the attachment of neighboring cells to each other and to the secreted extracellular matrix (ECM), respectively. The AJ (containing cadherins and catenins) and FAs (comprising integrins, talin, and paxillin) differ in protein composition, but both junctions contain the actin-binding protein vinculin. The near ubiquity of these structures in animals suggests that AJ and FAs evolved early, possibly coincident with multicellularity. However, a challenge to this perspective is that previous studies of sponges—a divergent animal lineage—indicate that their tissues are organized primarily by an alternative, sponge-specific cell-adhesion mechanism called “aggregation factor.” In this study, we examined the structure, biochemical properties, and tissue localization of a vinculin ortholog in the sponge Oscarella pearsei (Op). Our results indicate that Op vinculin localizes to both cell–cell and cell–ECM contacts and has biochemical and structural properties similar to those of vertebrate vinculin. We propose that Op vinculin played a role in cell adhesion and tissue organization in the last common ancestor of sponges and other animals. Furthermore, thesemore »
- Authors:
-
- Stanford Univ., Stanford, CA (United States)
- Univ. of Denver, Denver, CO (United States)
- Publication Date:
- Research Org.:
- SLAC National Accelerator Lab., Menlo Park, CA (United States)
- Sponsoring Org.:
- USDOE
- OSTI Identifier:
- 1469753
- Grant/Contract Number:
- AC02-76SF00515; R35GM118064; R01GM114462; 15-EXO15_2–0027
- Resource Type:
- Journal Article: Accepted Manuscript
- Journal Name:
- Journal of Biological Chemistry
- Additional Journal Information:
- Journal Volume: 293; Journal Issue: 30; Journal ID: ISSN 0021-9258
- Publisher:
- American Society for Biochemistry and Molecular Biology
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; adherens junction; focal adhesion; epithelium; protein evolution; evolution; Oscarella; Porifera; Sponge; Vinculin
Citation Formats
Miller, Phillip W., Pokutta, Sabine, Mitchell, Jennyfer M., Chodaparambil, Jayanth V., Clarke, D. Nathaniel, Nelson, W. James, Weis, William I., and Nichols, Scott A. Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution. United States: N. p., 2018.
Web. doi:10.1074/jbc.ra117.001325.
Miller, Phillip W., Pokutta, Sabine, Mitchell, Jennyfer M., Chodaparambil, Jayanth V., Clarke, D. Nathaniel, Nelson, W. James, Weis, William I., & Nichols, Scott A. Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution. United States. https://doi.org/10.1074/jbc.ra117.001325
Miller, Phillip W., Pokutta, Sabine, Mitchell, Jennyfer M., Chodaparambil, Jayanth V., Clarke, D. Nathaniel, Nelson, W. James, Weis, William I., and Nichols, Scott A. Thu .
"Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution". United States. https://doi.org/10.1074/jbc.ra117.001325. https://www.osti.gov/servlets/purl/1469753.
@article{osti_1469753,
title = {Analysis of a vinculin homolog in a sponge (phylum Porifera) reveals that vertebrate-like cell adhesions emerged early in animal evolution},
author = {Miller, Phillip W. and Pokutta, Sabine and Mitchell, Jennyfer M. and Chodaparambil, Jayanth V. and Clarke, D. Nathaniel and Nelson, W. James and Weis, William I. and Nichols, Scott A.},
abstractNote = {The evolution of cell-adhesion mechanisms in animals facilitated the assembly of organized multicellular tissues. Studies in traditional animal models have revealed two predominant adhesion structures, the adherens junction (AJ) and focal adhesions (FAs), which are involved in the attachment of neighboring cells to each other and to the secreted extracellular matrix (ECM), respectively. The AJ (containing cadherins and catenins) and FAs (comprising integrins, talin, and paxillin) differ in protein composition, but both junctions contain the actin-binding protein vinculin. The near ubiquity of these structures in animals suggests that AJ and FAs evolved early, possibly coincident with multicellularity. However, a challenge to this perspective is that previous studies of sponges—a divergent animal lineage—indicate that their tissues are organized primarily by an alternative, sponge-specific cell-adhesion mechanism called “aggregation factor.” In this study, we examined the structure, biochemical properties, and tissue localization of a vinculin ortholog in the sponge Oscarella pearsei (Op). Our results indicate that Op vinculin localizes to both cell–cell and cell–ECM contacts and has biochemical and structural properties similar to those of vertebrate vinculin. We propose that Op vinculin played a role in cell adhesion and tissue organization in the last common ancestor of sponges and other animals. Furthermore, these findings provide compelling evidence that sponge tissues are indeed organized like epithelia in other animals and support the notion that AJ- and FA-like structures extend to the earliest periods of animal evolution.},
doi = {10.1074/jbc.ra117.001325},
url = {https://www.osti.gov/biblio/1469753},
journal = {Journal of Biological Chemistry},
issn = {0021-9258},
number = 30,
volume = 293,
place = {United States},
year = {2018},
month = {6}
}
Web of Science
Works referenced in this record:
UFBoot2: Improving the Ultrafast Bootstrap Approximation
journal, October 2017
- Hoang, Diep Thi; Chernomor, Olga; von Haeseler, Arndt
- Molecular Biology and Evolution, Vol. 35, Issue 2
Overview of the CCP 4 suite and current developments
journal, March 2011
- Winn, Martyn D.; Ballard, Charles C.; Cowtan, Kevin D.
- Acta Crystallographica Section D Biological Crystallography, Vol. 67, Issue 4
Further characterization of the interaction between the cytoskeletal proteins talin and vinculin
journal, March 2002
- Bass, Mark D.; Patel, Bipin; Barsukov, Igor G.
- Biochemical Journal, Vol. 362, Issue 3
The structure and regulation of vinculin
journal, September 2006
- Ziegler, Wolfgang H.; Liddington, Robert C.; Critchley, David R.
- Trends in Cell Biology, Vol. 16, Issue 9
Mutational analysis supports a core role for Drosophila -Catenin in adherens junction function
journal, January 2012
- Sarpal, R.; Pellikka, M.; Patel, R. R.
- Journal of Cell Science, Vol. 125, Issue 1
The mechanical regulation of integrin–cadherin crosstalk organizes cells, signaling and forces
journal, February 2016
- Mui, Keeley L.; Chen, Christopher S.; Assoian, Richard K.
- Journal of Cell Science, Vol. 129, Issue 6
On some phenomena of coalescence and regeneration in sponges
journal, December 1907
- Wilson, H. V.
- Journal of Experimental Zoology, Vol. 5, Issue 2
Vinculin activation by talin through helical bundle conversion
journal, December 2003
- Izard, Tina; Evans, Gwyndaf; Borgon, Robert A.
- Nature, Vol. 427, Issue 6970
Force Fluctuations within Focal Adhesions Mediate ECM-Rigidity Sensing to Guide Directed Cell Migration
journal, December 2012
- Plotnikov, Sergey V.; Pasapera, Ana M.; Sabass, Benedikt
- Cell, Vol. 151, Issue 7
Epithelium--The Primary Building Block for Metazoan Complexity
journal, February 2003
- Tyler, S.
- Integrative and Comparative Biology, Vol. 43, Issue 1
Vinculin, an adapter protein in control of cell adhesion signalling
journal, February 2011
- Carisey, Alex; Ballestrem, Christoph
- European Journal of Cell Biology, Vol. 90, Issue 2-3
Converging and Unique Mechanisms of Mechanotransduction at Adhesion Sites
journal, August 2016
- Han, Mitchell K. L.; de Rooij, Johan
- Trends in Cell Biology, Vol. 26, Issue 8
Vinculin gene is non-essential in Drosophila melanogaster
journal, August 1997
- Alatortsev, Vladimir E.; Kramerova, Irina A.; Frolov, Maxim V.
- FEBS Letters, Vol. 413, Issue 2
Characterization of the Cadherin–Catenin Complex of the Sea Anemone Nematostella vectensis and Implications for the Evolution of Metazoan Cell–Cell Adhesion
journal, April 2016
- Clarke, Donald Nathaniel; Miller, Phillip W.; Lowe, Christopher J.
- Molecular Biology and Evolution, Vol. 33, Issue 8
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
journal, September 1997
- Altschul, Stephen F.; Madden, Thomas L.; Schäffer, Alejandro A.
- Nucleic Acids Research, Vol. 25, Issue 17, p. 3389-3402
MrBUMP : an automated pipeline for molecular replacement
journal, December 2007
- Keegan, Ronan M.; Winn, Martyn D.
- Acta Crystallographica Section D Biological Crystallography, Vol. 64, Issue 1
A Putative Catenin–Cadherin System Mediates Morphogenesis of the Caenorhabditis elegans Embryo
journal, April 1998
- Costa, Michael; Raich, William; Agbunag, Cristina
- The Journal of Cell Biology, Vol. 141, Issue 1
Cell–cell adhesion in metazoans relies on evolutionarily conserved features of the α-catenin·β-catenin–binding interface
journal, August 2017
- Shao, Xiangqiang; Kang, Hyunook; Loveless, Timothy
- Journal of Biological Chemistry, Vol. 292, Issue 40
Mechanical strain induces E-cadherin-dependent Yap1 and -catenin activation to drive cell cycle entry
journal, May 2015
- Benham-Pyle, B. W.; Pruitt, B. L.; Nelson, W. J.
- Science, Vol. 348, Issue 6238
An interaction between vinculin and talin
journal, April 1984
- Burridge, Keith; Mangeat, Paul
- Nature, Vol. 308, Issue 5961
Six major steps in animal evolution: are we derived sponge larvae?: Six major steps in animal evolution
journal, March 2008
- Nielsen, Claus
- Evolution & Development, Vol. 10, Issue 2
How vinculin regulates force transmission
journal, May 2013
- Dumbauld, D. W.; Lee, T. T.; Singh, A.
- Proceedings of the National Academy of Sciences, Vol. 110, Issue 24
Biochemical and Structural Definition of the l-Afadin- and Actin-binding Sites of α-Catenin
journal, March 2002
- Pokutta, Sabine; Drees, Frauke; Takai, Yoshimi
- Journal of Biological Chemistry, Vol. 277, Issue 21
Bench to bedside and back again: Molecular mechanisms of α-catenin function and roles in tumorigenesis
journal, February 2008
- Benjamin, Jacqueline M.; Nelson, W. James
- Seminars in Cancer Biology, Vol. 18, Issue 1
A prehistory of cell adhesion
journal, October 2004
- Harwood, Adrian; Coates, Juliet C.
- Current Opinion in Cell Biology, Vol. 16, Issue 5
XDS
journal, January 2010
- Kabsch, Wolfgang
- Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2
Carbohydrate-Carbohydrate Interactions Mediated by Sulfate Esters and Calcium Provide the Cell Adhesion Required for the Emergence of Early Metazoans
journal, February 2016
- Vilanova, Eduardo; Santos, Gustavo R. C.; Aquino, Rafael S.
- Journal of Biological Chemistry, Vol. 291, Issue 18
Adaptation of core mechanisms to generate cell polarity
journal, April 2003
- Nelson, W. James
- Nature, Vol. 422, Issue 6933
The origins of multicellular organisms: Multicellular origins
journal, January 2013
- Niklas, Karl J.; Newman, Stuart A.
- Evolution & Development, Vol. 15, Issue 1
Integrin, a Transmembrane Glycoprotein Complex Mediating Cell-Substratum Adhesion
journal, March 1987
- Buck, C. A.; Horwitz, A. F.
- Journal of Cell Science, Vol. 1987, Issue Supplement 8
Interaction of plasma membrane fibronectin receptor with talin—a transmembrane linkage
journal, April 1986
- Horwitz, Alan; Duggan, Kimberly; Buck, Clayton
- Nature, Vol. 320, Issue 6062
Crystal Structure of the Vinculin Tail Suggests a Pathway for Activation
journal, December 1999
- Bakolitsa, Constantina; de Pereda, José M.; Bagshaw, Clive R.
- Cell, Vol. 99, Issue 6
Origin and evolution of the sponge aggregation factor gene family
journal, January 2017
- Grice, Laura F.; Gauthier, Marie E. A.; Roper, Kathrein E.
- Molecular Biology and Evolution
Evidence of Signaling and Adhesion Roles for β-Catenin in the Sponge Ephydatia muelleri
journal, March 2018
- Schippers, Klaske J.; Nichols, Scott A.
- Molecular Biology and Evolution, Vol. 35, Issue 6
Vinculin in cell–cell and cell–matrix adhesions
journal, April 2017
- Bays, Jennifer L.; DeMali, Kris A.
- Cellular and Molecular Life Sciences, Vol. 74, Issue 16
ModelFinder: fast model selection for accurate phylogenetic estimates
journal, May 2017
- Kalyaanamoorthy, Subha; Minh, Bui Quang; Wong, Thomas K. F.
- Nature Methods, Vol. 14, Issue 6
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
journal, April 2016
- Trifinopoulos, Jana; Nguyen, Lam-Tung; von Haeseler, Arndt
- Nucleic Acids Research, Vol. 44, Issue W1
Chemical dissolution and in vitro reconstruction of sponge cell adhesions
journal, August 1963
- Humphreys, Tom
- Developmental Biology, Vol. 8, Issue 1
Diverse evolutionary paths to cell adhesion
journal, December 2010
- Abedin, Monika; King, Nicole
- Trends in Cell Biology, Vol. 20, Issue 12
The Multiple Origins of Complex Multicellularity
journal, May 2011
- Knoll, Andrew H.
- Annual Review of Earth and Planetary Sciences, Vol. 39, Issue 1
PHENIX: a comprehensive Python-based system for macromolecular structure solution
journal, January 2010
- Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor
- Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221
Structural and functional characterization of Caenorhabditis elegans α-catenin reveals constitutive binding to β-catenin and F-actin
journal, March 2017
- Kang, Hyunook; Bang, Injin; Jin, Kyeong Sik
- Journal of Biological Chemistry, Vol. 292, Issue 17
α-Catenin Is a Molecular Switch that Binds E-Cadherin-β-Catenin and Regulates Actin-Filament Assembly
journal, December 2005
- Drees, Frauke; Pokutta, Sabine; Yamada, Soichiro
- Cell, Vol. 123, Issue 5
Coordinated contractions effectively expel water from the aquiferous system of a freshwater sponge
journal, November 2007
- Elliott, G. R. D.; Leys, S. P.
- Journal of Experimental Biology, Vol. 210, Issue 21
Deconstructing the Cadherin-Catenin-Actin Complex
journal, December 2005
- Yamada, Soichiro; Pokutta, Sabine; Drees, Frauke
- Cell, Vol. 123, Issue 5
Type IV collagen in sponges, the missing link in basement membrane ubiquity*
journal, January 1996
- Boute, Nicolas; Exposito, Jean-Yves; Boury-Esnault, Nicole
- Biology of the Cell, Vol. 88, Issue 1-2
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing
journal, June 2011
- Sanchez, R.; Serra, F.; Tarraga, J.
- Nucleic Acids Research, Vol. 39, Issue suppl
In vitro and in vivo reconstitution of the cadherin-catenin-actin complex from Caenorhabditis elegans
journal, August 2010
- Kwiatkowski, A. V.; Maiden, S. L.; Pokutta, S.
- Proceedings of the National Academy of Sciences, Vol. 107, Issue 33
Paxillin: a new vinculin-binding protein present in focal adhesions
journal, September 1990
- Turner, C. E.
- The Journal of Cell Biology, Vol. 111, Issue 3
Dimer asymmetry defines α-catenin interactions
journal, January 2013
- Rangarajan, Erumbi S.; Izard, Tina
- Nature Structural & Molecular Biology, Vol. 20, Issue 2
HMMER web server: interactive sequence similarity searching
journal, May 2011
- Finn, R. D.; Clements, J.; Eddy, S. R.
- Nucleic Acids Research, Vol. 39, Issue suppl
Alpha 1(E)-catenin is an actin-binding and -bundling protein mediating the attachment of F-actin to the membrane adhesion complex.
journal, September 1995
- Rimm, D. L.; Koslov, E. R.; Kebriaei, P.
- Proceedings of the National Academy of Sciences, Vol. 92, Issue 19
Cadherins in development: cell adhesion, sorting, and tissue morphogenesis
journal, December 2006
- Halbleib, J. M.; Nelson, W. J.
- Genes & Development, Vol. 20, Issue 23
Vinculin is essential for muscle function in the nematode
journal, August 1991
- Barstead, R. J.
- The Journal of Cell Biology, Vol. 114, Issue 4
Nanoscale architecture of integrin-based cell adhesions
journal, November 2010
- Kanchanawong, Pakorn; Shtengel, Gleb; Pasapera, Ana M.
- Nature, Vol. 468, Issue 7323
Crystal Structure of Human Vinculin
journal, July 2004
- Borgon, Robert A.; Vonrhein, Clemens; Bricogne, Gerard
- Structure, Vol. 12, Issue 7
Drosophila vinculin is more harmful when hyperactive than absent, and can circumvent integrin to form adhesion complexes
journal, October 2016
- Maartens, Aidan P.; Wellmann, Jutta; Wictome, Emma
- Journal of Cell Science, Vol. 129, Issue 23
α-Catenin as a tension transducer that induces adherens junction development
journal, May 2010
- Yonemura, Shigenobu; Wada, Yuko; Watanabe, Toshiyuki
- Nature Cell Biology, Vol. 12, Issue 6
SMART 7: recent updates to the protein domain annotation resource
journal, November 2011
- Letunic, I.; Doerks, T.; Bork, P.
- Nucleic Acids Research, Vol. 40, Issue D1
Clustal W and Clustal X version 2.0
journal, September 2007
- Larkin, M. A.; Blackshields, G.; Brown, N. P.
- Bioinformatics, Vol. 23, Issue 21, p. 2947-2948
Running with neighbors: coordinating cell migration and cell–cell adhesion
journal, October 2015
- Collins, Caitlin; Nelson, W. James
- Current Opinion in Cell Biology, Vol. 36
α-Catenin Can Form Asymmetric Homodimeric Complexes and/or Heterodimeric Complexes with β-Catenin
journal, October 1997
- Koslov, Erika R.; Maupin, Pam; Pradhan, Deepti
- Journal of Biological Chemistry, Vol. 272, Issue 43
The minimal cadherin-catenin complex binds to actin filaments under force
journal, October 2014
- Buckley, C. D.; Tan, J.; Anderson, K. L.
- Science, Vol. 346, Issue 6209
Physical properties of sponge aggregation factor. Unique proteoglycan complex
journal, July 1973
- Cauldwell, Charles B.; Henkart, Pierre; Humphreys, Tom
- Biochemistry, Vol. 12, Issue 16
An Autoinhibited Structure of α-Catenin and Its Implications for Vinculin Recruitment to Adherens Junctions
journal, April 2013
- Ishiyama, Noboru; Tanaka, Nobutoshi; Abe, Kentaro
- Journal of Biological Chemistry, Vol. 288, Issue 22
Characterization of sponge aggregation factor. Unique proteoglycan complex
journal, July 1973
- Henkart, Pierre; Humphreys, Susie; Humphreys, Tom
- Biochemistry, Vol. 12, Issue 16
The C. elegans dense body: anchoring and signaling structure of the muscle
journal, May 2007
- Lecroisey, Claire; Ségalat, Laurent; Gieseler, Kathrin
- Journal of Muscle Research and Cell Motility, Vol. 28, Issue 1
The Pfam protein families database
journal, January 2004
- Bateman, Alex; Coin, Lachlan; Durbin, Richard
- Nucleic Acids Research, Vol. 32, Issue S1, p. D138-D141
Adherens junctions: from molecules to morphogenesis
journal, July 2010
- Harris, Tony J. C.; Tepass, Ulrich
- Nature Reviews Molecular Cell Biology, Vol. 11, Issue 7
An epithelial tissue in Dictyostelium challenges the traditional origin of metazoan multicellularity
journal, August 2012
- Dickinson, Daniel J.; Nelson, W. James; Weis, William I.
- BioEssays, Vol. 34, Issue 10
Freshwater Sponges Have Functional, Sealing Epithelia with High Transepithelial Resistance and Negative Transepithelial Potential
journal, November 2010
- Adams, Emily D. M.; Goss, Greg G.; Leys, Sally P.
- PLoS ONE, Vol. 5, Issue 11
A Polarized Epithelium Organized by - and -Catenin Predates Cadherin and Metazoan Origins
journal, March 2011
- Dickinson, D. J.; Nelson, W. J.; Weis, W. I.
- Science, Vol. 331, Issue 6022
Larval development in the Homoscleromorpha (Porifera, Demospongiae)
journal, September 2003
- Boury-Esnault, Nicole; Ereskovsky, Alexander; Bézac, Chantal
- Invertebrate Biology, Vol. 122, Issue 3
The Amphimedon queenslandica genome and the evolution of animal complexity
journal, August 2010
- Srivastava, Mansi; Simakov, Oleg; Chapman, Jarrod
- Nature, Vol. 466, Issue 7307
From cells to organs: building polarized tissue
journal, November 2008
- Bryant, David M.; Mostov, Keith E.
- Nature Reviews Molecular Cell Biology, Vol. 9, Issue 11
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
journal, November 2014
- Nguyen, Lam-Tung; Schmidt, Heiko A.; von Haeseler, Arndt
- Molecular Biology and Evolution, Vol. 32, Issue 1
Ancient origin of the integrin-mediated adhesion and signaling machinery
journal, May 2010
- Sebe-Pedros, A.; Roger, A. J.; Lang, F. B.
- Proceedings of the National Academy of Sciences, Vol. 107, Issue 22
Decisions, decisions: β-catenin chooses between adhesion and transcription
journal, May 2005
- Harris, Tony J. C.; Peifer, Mark
- Trends in Cell Biology, Vol. 15, Issue 5
Structural basis for vinculin activation at sites of cell adhesion
journal, June 2004
- Bakolitsa, Constantina; Cohen, Daniel M.; Bankston, Laurie A.
- Nature, Vol. 430, Issue 6999
E-catenin is an autoinhibited molecule that coactivates vinculin
journal, May 2012
- Choi, H. -J.; Pokutta, S.; Cadwell, G. W.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 22
The contractile sponge epithelium sensu lato - body contraction of the demosponge Tethya wilhelma is mediated by the pinacoderm
journal, April 2011
- Nickel, M.; Scheer, C.; Hammel, J. U.
- Journal of Experimental Biology, Vol. 214, Issue 10
Danio rerio αE-catenin Is a Monomeric F-actin Binding Protein with Distinct Properties from Mus musculus αE-catenin
journal, June 2013
- Miller, Phillip W.; Pokutta, Sabine; Ghosh, Agnidipta
- Journal of Biological Chemistry, Vol. 288, Issue 31
Transcriptome sequencing and delimitation of sympatric Oscarella species (O. carmela and O. pearsei sp. nov) from California, USA
journal, September 2017
- Ereskovsky, Alexander V.; Richter, Daniel J.; Lavrov, Dennis V.
- PLOS ONE, Vol. 12, Issue 9
Carbohydrate self-recognition mediates marine sponge cellular adhesion
journal, July 2001
- Haseley, S. R.; Vermeer, H. J.; Kamerling, J. P.
- Proceedings of the National Academy of Sciences, Vol. 98, Issue 16
The Activity of the Vinculin Binding Sites in Talin Is Influenced by the Stability of the Helical Bundles That Make Up The Talin Rod
journal, January 2006
- Patel, Bipin; Gingras, Alexandre R.; Bobkov, Audrey A.
- Journal of Biological Chemistry, Vol. 281, Issue 11
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
journal, June 2009
- Capella-Gutierrez, S.; Silla-Martinez, J. M.; Gabaldon, T.
- Bioinformatics, Vol. 25, Issue 15
Early evolution of animal cell signaling and adhesion genes
journal, August 2006
- Nichols, S. A.; Dirks, W.; Pearse, J. S.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 33
αE-catenin regulates actin dynamics independently of cadherin-mediated cell–cell adhesion
journal, April 2010
- Benjamin, Jacqueline M.; Kwiatkowski, Adam V.; Yang, Changsong
- The Journal of Cell Biology, Vol. 189, Issue 2
BLAST+: architecture and applications
journal, January 2009
- Camacho, Christiam; Coulouris, George; Avagyan, Vahram
- BMC Bioinformatics, Vol. 10, Issue 1
Epithelia and integration in sponges
journal, June 2009
- Leys, S. P.; Nichols, S. A.; Adams, E. D. M.
- Integrative and Comparative Biology, Vol. 49, Issue 2
Origin of animal epithelia: insights from the sponge genome: Evolution of epithelia
journal, October 2010
- Fahey, Bryony; Degnan, Bernard M.
- Evolution & Development, Vol. 12, Issue 6
The Homoscleromorph sponge Oscarella lobularis , a promising sponge model in evolutionary and developmental biology : Model sponge
journal, January 2009
- Ereskovsky, Alexander V.; Borchiellini, Carole; Gazave, Eve
- BioEssays, Vol. 31, Issue 1
Cadherin Adhesion Receptors Orient the Mitotic Spindle during Symmetric Cell Division in Mammalian Epithelia
journal, August 2009
- den Elzen, Nicole; Buttery, Carmen V.; Maddugoda, Madhavi P.
- Molecular Biology of the Cell, Vol. 20, Issue 16
A six-armed, tenascin-like protein extracted from the Porifera Oscarella tuberculata (Homosclerophorida)
journal, August 1993
- Humbert-David, Nathalie; Garrone, Robert
- European Journal of Biochemistry, Vol. 216, Issue 1
Structure of the Dimerization and β-Catenin- Binding Region of α-Catenin
journal, March 2000
- Pokutta, Sabine; Weis, William I.
- Molecular Cell, Vol. 5, Issue 3
Cell aggregation: Properties of specific cell-ligands and their role in the formation of multicellular systems
journal, September 1968
- Moscona, A. A.
- Developmental Biology, Vol. 18, Issue 3
Structural and Thermodynamic Characterization of Cadherin·β-Catenin·α-Catenin Complex Formation
journal, April 2014
- Pokutta, Sabine; Choi, Hee-Jung; Ahlsen, Goran
- Journal of Biological Chemistry, Vol. 289, Issue 19
Origin of metazoan cadherin diversity and the antiquity of the classical cadherin/ -catenin complex
journal, July 2012
- Nichols, S. A.; Roberts, B. W.; Richter, D. J.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 32
Phaser crystallographic software
journal, July 2007
- McCoy, Airlie J.; Grosse-Kunstleve, Ralf W.; Adams, Paul D.
- Journal of Applied Crystallography, Vol. 40, Issue 4
The Pfam Protein Families Database
journal, January 2002
- Bateman, A.
- Nucleic Acids Research, Vol. 30, Issue 1
Works referencing / citing this record:
Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila
journal, February 2019
- Raza, Qanber; Choi, Jae Young; Li, Yang
- PLOS Genetics, Vol. 15, Issue 2
Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila
journal, February 2019
- Raza, Qanber; Choi, Jae Young; Li, Yang
- PLOS Genetics, Vol. 15, Issue 2
The significance of sponges for comparative studies of developmental evolution
journal, July 2019
- Colgren, Jeffrey; Nichols, Scott A.
- WIREs Developmental Biology, Vol. 9, Issue 2
Modelling the early evolution of extracellular matrix from modern Ctenophores and Sponges
journal, August 2019
- Draper, Graham W.; Shoemark, Deborah K.; Adams, Josephine C.
- Essays in Biochemistry, Vol. 63, Issue 3