Representing life in the Earth system with soil microbial functional traits in the MIMICS model
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journal
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January 2015 |
Diversity, taxonomic composition, and functional aspects of fungal communities in living, senesced, and fallen leaves at five sites across North America
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journal
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January 2016 |
A molecular, morphological and ecological re-appraisal of Venturiales―a new order of Dothideomycetes
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journal
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November 2011 |
Plant Competition Underground
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journal
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November 1997 |
Functional diversity in resource use by fungi
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journal
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August 2010 |
A Theoretical Model of Litter Decay and Microbial Interaction
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journal
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May 2006 |
Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB
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journal
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July 2006 |
Fungal Taxa Target Different Carbon Sources in Forest Soil
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journal
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September 2008 |
Secretome analysis identifies potential virulence factors of Diplodia corticola, a fungal pathogen involved in cork oak (Quercus suber) decline
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journal
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May 2014 |
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
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journal
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July 2011 |
Changes in microbial dynamics during long-term decomposition in tropical forests
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journal
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November 2013 |
Active and total microbial communities in forest soil are largely different and highly stratified during decomposition
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journal
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July 2011 |
Trimmomatic: a flexible trimmer for Illumina sequence data
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journal
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April 2014 |
Mechanisms of Maintenance of Species Diversity
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journal
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November 2000 |
Correlation detection strategies in microbial data sets vary widely in sensitivity and precision
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journal
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February 2016 |
A new method for non-parametric multivariate analysis of variance: NON-PARAMETRIC MANOVA FOR ECOLOGY
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journal
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February 2001 |
Decomposition rate of organic substrates in relation to the species diversity of soil saprophytic fungi
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journal
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January 2004 |
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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journal
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September 1997 |
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
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journal
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April 2014 |
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
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journal
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June 2007 |
Functional Redundancy Supports Biodiversity and Ecosystem Function in a Closed and Constant Environment
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journal
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June 2004 |
Mastering ectomycorrhizal symbiosis: the impact of carbohydrates
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journal
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February 2008 |
Are ectomycorrhizal fungi alleviating or aggravating nitrogen limitation of tree growth in boreal forests?
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journal
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January 2013 |
Microbial abundance and composition influence litter decomposition response to environmental change
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journal
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March 2013 |
Does Atmospheric NO 3 − Deposition Alter the Abundance and Activity of Ligninolytic Fungi in Forest Soils?
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journal
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September 2007 |
Microbial Population and Community Dynamics on Plant Roots and Their Feedbacks on Plant Communities
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journal
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October 2012 |
Consistent responses of soil microbial communities to elevated nutrient inputs in grasslands across the globe
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journal
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August 2015 |
Experimental warming alters potential function of the fungal community in boreal forest
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journal
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March 2016 |
Simulated Atmospheric N Deposition Alters Fungal Community Composition and Suppresses Ligninolytic Gene Expression in a Northern Hardwood Forest
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journal
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June 2011 |
Exploring bacterial lignin degradation
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journal
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April 2014 |
Fungal community on decomposing leaf litter undergoes rapid successional changes
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journal
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October 2012 |
Chronic nitrogen enrichment affects the structure and function of the soil microbial community in temperate hardwood and pine forests
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journal
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July 2004 |
Chemical warfare between microbes promotes biodiversity
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journal
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January 2002 |
Causes of variation in soil carbon simulations from CMIP5 Earth system models and comparison with observations
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journal
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January 2013 |
Ecology of ligninolytic fungi associated with leaf litter decomposition
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journal
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June 2007 |
Shifts in fungal communities during decomposition of boreal forest litter
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journal
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August 2014 |
Contrasting Effects of Substrate and Fertilizer Nitrogen on the Early Stages of Litter Decomposition
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journal
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September 2005 |
Differential abundance analysis for microbial marker-gene surveys
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journal
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September 2013 |
Bacterial succession on decomposing leaf litter exhibits a specific occurrence pattern of cellulolytic taxa and potential decomposers of fungal mycelia
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journal
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August 2016 |
Initial Phylogenetic Relatedness of Saprotrophic Fungal Communities Affects Subsequent Litter Decomposition Rates
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journal
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October 2014 |
Building Predictive Models for Diverse Microbial Communities in Soil
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book
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February 2017 |
Relationships Among Fires, Fungi, and soil Dynamics in Alaskan Boreal Forests
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journal
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December 2004 |
Evolutionary trade-offs among decomposers determine responses to nitrogen enrichment: Evolutionary trade-offs among decomposers
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journal
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July 2011 |
Combining Substrate Specificity Analysis with Support Vector Classifiers Reveals Feruloyl Esterase as a Phylogenetically Informative Protein Group
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journal
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September 2010 |
Distributions of fungal melanin across species and soils
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journal
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October 2017 |
The priming effect of organic matter: a question of microbial competition?
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journal
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June 2003 |
Ectomycorrhizal fungi decompose soil organic matter using oxidative mechanisms adapted from saprotrophic ancestors
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journal
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November 2015 |
Producer–decomposer co-dependency influences biodiversity effects
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journal
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February 2000 |
The importance of niches for the maintenance of species diversity
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journal
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August 2009 |
Seasonal variation and distribution of total and active microbial community of β-glucosidase encoding genes in coniferous forest soil
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journal
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February 2017 |
UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi: Methods
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journal
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March 2005 |
MycoCosm portal: gearing up for 1000 fungal genomes
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journal
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December 2013 |
Response regulators of bacterial signal transduction systems: Selective domain shuffling during evolution
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journal
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February 1995 |
Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi
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journal
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June 2014 |
Phylloplane yeasts from Portugal: Seven novel anamorphic species in the Tremellales lineage of the Hymenomycetes (Basidiomycota) producing orange-coloured colonies
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journal
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December 2005 |
A domain-centric solution to functional genomics via dcGO Predictor
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journal
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February 2013 |
Differential responses of total and active soil microbial communities to long-term experimental N deposition
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journal
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November 2015 |
Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness
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journal
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July 2001 |
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
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journal
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April 2016 |
Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
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journal
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March 2012 |
Feed in summer, rest in winter: microbial carbon utilization in forest topsoil
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journal
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September 2017 |
The change of global terrestrial ecosystem net primary productivity (NPP) and its response to climate change in CMIP5
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journal
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August 2014 |
Requirement for a Growth Substrate During Lignin Decomposition by Two Wood-Rotting Fungi
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journal
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January 1976 |
Assessment of Bias Associated with Incomplete Extraction of Microbial DNA from Soil
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journal
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June 2009 |
Changes in Soil Fungal Communities, Extracellular Enzyme Activities, and Litter Decomposition Across a Fire Chronosequence in Alaskan Boreal Forests
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journal
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September 2012 |
Characterization of Carbohydrate-Binding Cytochrome b562 from the White-Rot Fungus Phanerochaete chrysosporium
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journal
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August 2005 |
Links between plant litter chemistry, species diversity, and below-ground ecosystem function
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journal
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December 2008 |
Enzymatic "Combustion": The Microbial Degradation of Lignin
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journal
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October 1987 |
Botrytis caroliniana , a new species isolated from blackberry in South Carolina
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journal
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May 2012 |
Copy number variation contributes to cryptic genetic variation in outbreak lineages of Cryptococcus gattii from the North American Pacific Northwest
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journal
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September 2016 |
The under-recognized dominance of Verrucomicrobia in soil bacterial communities
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journal
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July 2011 |
Linking biodiversity and ecosystems: towards a unifying ecological theory
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journal
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January 2010 |
Sequence Depth, Not PCR Replication, Improves Ecological Inference from Next Generation DNA Sequencing
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journal
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February 2014 |
Persistence of soil organic matter as an ecosystem property
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journal
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October 2011 |
A theoretical explanation of the priming effect based on microbial growth with two limiting substrates
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journal
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January 1976 |
The oxidation of veratryl alcohol, dimeric lignin models and lignin by lignin peroxidase: The redox cycle revisited
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journal
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March 1994 |
Living in a fungal world: impact of fungi on soil bacterial niche development
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journal
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September 2005 |
UPARSE: highly accurate OTU sequences from microbial amplicon reads
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journal
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August 2013 |
Selective Degradation of Wood Components by White-Rot Fungi
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journal
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December 1977 |
Global soil carbon projections are improved by modelling microbial processes
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journal
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July 2013 |
Microbial activity and soil respiration under nitrogen addition in Alaskan boreal forest
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journal
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May 2008 |
Pathways for degradation of lignin in bacteria and fungi
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journal
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January 2011 |
The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes
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journal
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June 2012 |
Ecosystem response of pasture soil communities to fumigation-induced microbial diversity reductions: an examination of the biodiversity-ecosystem function relationship
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journal
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August 2000 |
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
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journal
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February 2016 |
Spatiotemporal Differences in 15N Uptake and the Organization of an Old-Field Plant Community
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journal
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June 1990 |
Optimization of cellulase production by a brown rot fungus Fomitopsis sp. RCK2010 under solid state fermentation
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journal
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May 2011 |
Statistical Power Analysis
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journal
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June 1992 |
Patterns in decomposition rates among photosynthetic organisms: the importance of detritus C:N:P content
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journal
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July 1993 |
ITS primers with enhanced specificity for basidiomycetes - application to the identification of mycorrhizae and rusts
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journal
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April 1993 |
The Effect of Added Nitrogen on the rate of Decomposition of Organic Matter
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journal
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August 1988 |
Atmospheric nitrate deposition and the microbial degradation of cellobiose and vanillin in a northern hardwood forest
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journal
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June 2004 |
Genomic insights into the carbohydrate catabolism of Cairneyella variabilis gen. nov. sp. nov., the first reports from a genome of an ericoid mycorrhizal fungus from the southern hemisphere
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journal
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February 2016 |
Observations and modeling of biomass and soil organic matter dynamics for the grassland biome worldwide
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journal
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December 1993 |
Reduction of forest soil respiration in response to nitrogen deposition
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journal
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April 2010 |
Diversity effects on production in different light and fertility environments: an experiment with communities of annual plants
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journal
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June 2003 |
Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi
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journal
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December 2012 |
Litter decay rates are determined by lignin chemistry
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journal
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April 2011 |
Functional- and abundance-based mechanisms explain diversity loss due to N fertilization
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journal
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March 2005 |
Nutrient economy of red pine is affected by interactions between Pisolithus tinctorius and other forest-floor microbes
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journal
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April 2001 |
Fungal Traits That Drive Ecosystem Dynamics on Land
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journal
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May 2015 |
Biodiversity and Ecosystem Functioning: Current Knowledge and Future Challenges
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journal
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October 2001 |
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
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journal
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March 2012 |
Cheaters, diffusion and nutrients constrain decomposition by microbial enzymes in spatially structured environments: Constraints on enzymatic decomposition
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journal
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April 2005 |
Plant coexistence and the niche
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journal
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November 2004 |
Endemism and functional convergence across the North American soil mycobiome
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journal
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April 2014 |
Interactions among lignin, cellulose, and nitrogen drive litter chemistry–decay relationships
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journal
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February 2012 |
Dynamics of C, N, P and S in grassland soils: a model
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journal
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February 1988 |
Microbial Enzyme Shifts Explain Litter Decay Responses to Simulated Nitrogen Deposition
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journal
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September 2000 |
Toward an Ecological Classification of soil Bacteria
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journal
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June 2007 |