skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Use of computational modeling combined with advanced visualization to develop strategies for the design of crop ideotypes to address food security

Journal Article · · Nutrition Reviews
 [1];  [2];  [3];  [4]
  1. Univ. of Illinois, Urbana-Champaign, IL (United States). National Center for Supercomputing Applications (NCSA)
  2. Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
  3. Univ. of Illinois, Urbana-Champaign, IL (United States). Dept. of Computer Science
  4. Univ. of Illinois, Urbana-Champaign, IL (United States). Dept. of Plant Biology

Sustainable crop production is a contributing factor to current and future food security. Innovative technologies are needed to design strategies that will achieve higher crop yields on less land and with fewer resources. Computational modeling coupled with advanced scientific visualization enables researchers to explore and interact with complex agriculture, nutrition, and climate data to predict how crops will respond to untested environments. These virtual observations and predictions can direct the development of crop ideotypes designed to meet future yield and nutritional demands. This review surveys modeling strategies for the development of crop ideotypes and scientific visualization technologies that have led to discoveries in “big data” analysis. Combined modeling and visualization approaches have been used to realistically simulate crops and to guide selection that immediately enhances crop quantity and quality under challenging environmental conditions. Lastly, this survey of current and developing technologies indicates that integrative modeling and advanced scientific visualization may help overcome challenges in agriculture and nutrition data as large-scale and multidimensional data become available in these fields.

Research Organization:
Pacific Northwest National Laboratory (PNNL), Richland, WA (United States)
Sponsoring Organization:
USDOE; National Science Foundation (NSF); Bill and Melinda Gates Foundation; Foundation for Food and Agriculture Research (FFAR)
Grant/Contract Number:
AC05-76RL01830; 515760
OSTI ID:
1438248
Journal Information:
Nutrition Reviews, Vol. 76, Issue 5; ISSN 0029-6643
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 13 works
Citation information provided by
Web of Science

References (71)

Emergent and divergent resilience behavior in catastrophic shift systems journal February 2015
Food consumption patterns and economic growth. Increasing affluence and the use of natural resources journal December 2010
Infographics And Public Policy: Using Data Visualization To Convey Complex Information journal November 2015
Using L-systems for modeling source-sink interactions, architecture and physiology of growing trees: the L-PEACH model journal February 2005
Network dynamics with BrainX3: a large-scale simulation of the human brain network with real-time interaction journal February 2015
Multi-scale modelling to synergise Plant Systems Biology and Crop Science journal February 2017
More than taking the heat: crops and global change journal June 2010
e -photosynthesis: a comprehensive dynamic mechanistic model of C3 photosynthesis: from light capture to sucrose synthesis : Dynamic systems model of C3 photosynthesis journal November 2012
Modeling hairy root tissue growth in in vitro environments using an agent-based, structured growth model journal November 2013
Next generation agricultural system models and knowledge products: Synthesis and strategy journal July 2017
Urban consumption of meat and milk and its green and blue water footprints—Patterns in the 1980s and 2000s for Nairobi, Kenya journal February 2017
QTL analysis and QTL-based prediction of flowering phenology in recombinant inbred lines of barley journal January 2005
Yield Trends Are Insufficient to Double Global Crop Production by 2050 journal June 2013
Effects of elevated CO 2 on the protein concentration of food crops: a meta-analysis journal March 2008
Immersive VR for scientific visualization: a progress report journal January 2000
ADEL-maize: an L-system based model for the integration of growth processes from the organ to the canopy. Application to regulation of morphogenesis by light availability journal January 1999
Root Cortical Aerenchyma Enhances the Growth of Maize on Soils with Suboptimal Availability of Nitrogen, Phosphorus, and Potassium journal May 2011
Optimizing the Distribution of Resources between Enzymes of Carbon Metabolism Can Dramatically Increase Photosynthetic Rate: A Numerical Simulation Using an Evolutionary Algorithm journal August 2007
Increasing CO2 threatens human nutrition journal May 2014
Improving Photosynthetic Efficiency for Greater Yield journal June 2010
Big Data in food and agriculture journal January 2016
A Rule-based Model of Barley Morphogenesis, with Special Respect to Shading and Gibberellic Acid Signal Transduction journal August 2007
Accelerating yield potential in soybean: potential targets for biotechnological improvement: Targets to improve soybean yields journal July 2011
We need winners in the race to increase photosynthesis in rice, whether from conventional breeding, biotechnology or both: Increasing photosynthesis in rice journal October 2013
Recent patterns of crop yield growth and stagnation journal January 2012
Functional–structural plant models: a growing paradigm for plant studies journal September 2014
A physiological and biophysical model of coppice willow ( S alix spp.) production yields for the contiguous USA in current and future climate scenarios : Physiologically based model of a woody bioenergy crop journal June 2015
Assessing the effects of architectural variations on light partitioning within virtual wheat–pea mixtures journal June 2014
Improving photosynthesis and crop productivity by accelerating recovery from photoprotection journal November 2016
Plants in silico : why, why now and what?-an integrative platform for plant systems biology research : Plants journal December 2015
Food for Thought: Lower-Than-Expected Crop Yield Stimulation with Rising CO2 Concentrations journal June 2006
Under what circumstances can process-based simulation models link genotype to phenotype for complex traits? Case-study of fruit and grain quality traits journal December 2009
Global Expanded Nutrient Supply (GENuS) Model: A New Method for Estimating the Global Dietary Supply of Nutrients journal January 2016
Model-Assisted Estimation of the Genetic Variability in Physiological Parameters Related to Tomato Fruit Growth under Contrasted Water Conditions journal December 2016
Reduction of transpiration and altered nutrient allocation contribute to nutrient decline of crops grown in elevated CO 2 concentrations : Nutrient decline mechanisms in CO journal October 2012
Designing a high-yielding maize ideotype for a changing climate in Lombardy plain (northern Italy) journal November 2014
Linking water stress effects on carbon partitioning by introducing a xylem circuit into L-PEACH journal May 2011
Functional–structural plant modelling: a new versatile tool in crop science journal December 2009
Spatial Understanding in Immersive Virtual Environments journal December 2003
Combining Quantitative Trait Loci Analysis and an Ecophysiological Model to Analyze the Genetic Variability of the Responses of Maize Leaf Growth to Temperature and Water Deficit journal January 2003
The slow reversibility of photosystem II thermal energy dissipation on transfer from high to low light may cause large losses in carbon gain by crop canopies: a theoretical analysis journal May 2004
ALAMEDA, a Structural–Functional Model for Faba Bean Crops: Morphological Parameterization and Verification journal January 2006
From Genotype × Environment Interaction to Gene × Environment Interaction journal April 2012
Meeting the Global Food Demand of the Future by Engineering Crop Photosynthesis and Yield Potential journal March 2015
Impacts of elevated atmospheric CO2 on nutrient content of important food crops journal July 2015
A Canopy Architectural Model to Study the Competitive Ability of Chickpea with Sowthistle journal April 2008
A parameterization of leaf phenology for the terrestrial ecosystem component of climate models journal January 2005
Evaluation of Diet-Related Infographics on Pinterest for Use of Behavior Change Theories: A Content Analysis journal January 2016
The Agricultural Model Intercomparison and Improvement Project (AgMIP): Protocols and pilot studies journal March 2013
Utility of root cortical aerenchyma under water limited conditions in tropical maize (Zea mays L.) journal February 2015
Modeling plant growth and development journal February 2004
Modeling dense inflorescences journal July 2016
Description and visualization of graminaceous plants with an organ-based 3D architectural model, exemplified for spring barley (Hordeum vulgare L.) journal May 2007
Simultaneous improvement in productivity, water use, and albedo through crop structural modification journal April 2014
Use of crop simulation modelling to aid ideotype design of future cereal cultivars journal March 2015
Root Cortical Aerenchyma Enhances Nitrogen Acquisition from Low-Nitrogen Soils in Maize journal June 2014
A semimechanistic model predicting the growth and production of the bioenergy crop Miscanthus × giganteus: description, parameterization and validation journal August 2009
The CAVE: audio visual experience automatic virtual environment journal June 1992
Effect of increased concentrations of atmospheric carbon dioxide on the global threat of zinc deficiency: a modelling study journal October 2015
Minirhizotron imaging reveals that nodulation of field-grown soybean is enhanced by free-air CO2 enrichment only when combined with drought stress journal January 2013
Rising Consumption of Meat and Milk in Developing Countries Has Created a New Food Revolution journal November 2003
The breeding of crop ideotypes journal December 1968
Optimal crop canopy architecture to maximise canopy photosynthetic CO2 uptake under elevated CO2 – a theoretical study using a mechanistic model of canopy photosynthesis journal January 2013
Integrating simulation of architectural development and source - sink behaviour of peach trees by incorporating Markov chains and physiological organ function submodels into L-PEACH journal January 2008
An Overview of CMIP5 and the Experiment Design journal April 2012
Incorporating Reanalysis-Based Short-Term Forecasts from a Regional Climate Model in an Irrigation Scheduling Optimization Problem journal May 2014
Effects of Stereo and Screen Size on the Legibility of Three-Dimensional Streamtube Visualization journal December 2012
A Study of Layout, Rendering, and Interaction Methods for Immersive Graph Visualization journal July 2016
The DSSAT cropping system model journal January 2003
Which Design Components of Nutrition Infographics Make Them Memorable and Compelling? journal November 2016
Big Data in Agriculture: Property Rights, Privacy and Competition in Ag Data Services text January 2016

Similar Records

FACE-IT. A Science Gateway for Food Security Research
Journal Article · Tue Jul 14 00:00:00 EDT 2015 · Concurrency and Computation. Practice and Experience · OSTI ID:1438248

Introducing perennial biomass crops into agricultural landscapes to address water quality challenges and provide other environmental services: Integrating perennial bioenergy crops into agricultural landscapes
Journal Article · Wed Nov 29 00:00:00 EST 2017 · Wiley Interdisciplinary Reviews. Energy and Environment · OSTI ID:1438248

Introducing perennial biomass crops into agricultural landscapes to address water quality challenges and provide other environmental services
Journal Article · Wed Nov 29 00:00:00 EST 2017 · Wiley Interdisciplinary Reviews. Energy and Environment · OSTI ID:1438248