CHARMM-GUI Input Generator for NAMD, Gromacs, Amber, Openmm, and CHARMM/OpenMM Simulations using the CHARMM36 Additive Force Field
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journal
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February 2016 |
Computational Study of Methionine Methylation Process Catalyzed by SETD3
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April 2022 |
An engineered solvent system for sugar production from lignocellulosic biomass using biomass derived γ-valerolactone
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January 2016 |
Valorization of bamboo by γ-valerolactone/acid/water to produce digestible cellulose, degraded sugars and lignin
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journal
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April 2017 |
Nonenzymatic Sugar Production from Biomass Using Biomass-Derived -Valerolactone
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January 2014 |
Organic amine catalytic organosolv pretreatment of corn stover for enzymatic saccharification and high-quality lignin
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May 2017 |
CHARMM36 all-atom additive protein force field: Validation based on comparison to NMR data
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July 2013 |
Molecular-Level Origins of Biomass Recalcitrance: Decrystallization Free Energies for Four Common Cellulose Polymorphs
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April 2011 |
Synergetic Effects of Alcohol/Water Mixing on the Catalytic Reductive Fractionation of Poplar Wood
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October 2016 |
P-LINCS: A Parallel Linear Constraint Solver for Molecular Simulation
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December 2007 |
A mild biomass pretreatment using γ-valerolactone for concentrated sugar production
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January 2016 |
Molecular Driving Forces behind the Tetrahydrofuran–Water Miscibility Gap
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January 2016 |
Vapor–Liquid Equilibria, Excess Enthalpy, and Density of Aqueous γ-Valerolactone Solutions.
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journal
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January 2016 |
Vapor-pressure Relations in Mixtures of Two Liquids, III.
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November 1900 |
Local Phase Separation of Co-solvents Enhances Pretreatment of Biomass for Bioenergy Applications
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August 2016 |
Current Pretreatment Technologies for the Development of Cellulosic Ethanol and Biorefineries
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September 2015 |
Extension of the CHARMM general force field to sulfonyl-containing compounds and its utility in biomolecular simulations
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July 2012 |
Phase equilibria in the system tetrahydrofuran(1)-water(2)
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January 1972 |
CELF pretreatment of corn stover boosts ethanol titers and yields from high solids SSF with low enzyme loadings
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January 2016 |
Automation of the CHARMM General Force Field (CGenFF) II: Assignment of Bonded Parameters and Partial Atomic Charges
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November 2012 |
Organosolv pretreatment of sorghum bagasse using a low concentration of hydrophobic solvents such as 1-butanol or 1-pentanol
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February 2016 |
The Statistical Thermodynamics of Multicomponent Systems
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July 1945 |
Effects of organosolv pretreatment and enzymatic hydrolysis on cellulose structure and crystallinity in Loblolly pine
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May 2010 |
Organosolv pretreatment for enzymatic hydrolysis of poplars: I. Enzyme hydrolysis of cellulosic residues
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May 1988 |
CHARMM-GUI: A web-based graphical user interface for CHARMM
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March 2008 |
Fractionation of wheat straw by prehydrolysis, organosolv delignification and enzymatic hydrolysis for production of sugars and lignin
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June 2012 |
Common processes drive the thermochemical pretreatment of lignocellulosic biomass
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January 2014 |
Canonical sampling through velocity rescaling
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January 2007 |
Coupling metal halides with a co-solvent to produce furfural and 5-HMF at high yields directly from lignocellulosic biomass as an integrated biofuels strategy
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January 2014 |
Lignin Impact on Fiber Degradation. 3. Reversal of Inhibition of Enzymatic Hydrolysis by Chemical Modification of Lignin and by Additives
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May 1997 |
LINCS: A linear constraint solver for molecular simulations
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journal
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September 1997 |
Organosolvent pretreatment and enzymatic hydrolysis of rice straw for the production of bioethanol
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July 2011 |
Hydrolysis of lignocellulosic materials for ethanol production: a review
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May 2002 |
Co-solvent Pretreatment Reduces Costly Enzyme Requirements for High Sugar and Ethanol Yields from Lignocellulosic Biomass
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February 2015 |
Molecular dynamics with coupling to an external bath
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October 1984 |
THE weighted histogram analysis method for free-energy calculations on biomolecules. I. The method
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October 1992 |
The structural properties of alcohol–water mixtures
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January 1966 |
CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields
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January 2009 |
Force Pulling of Single Cellulose Chains at the Crystalline Cellulose−Liquid Interface: A Molecular Dynamics Study
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April 2009 |
Molecular basis for assembly of the shieldin complex and its implications for NHEJ
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April 2020 |
Organosolv pretreatment of lignocellulosic biomass for enzymatic hydrolysis
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February 2009 |
g_wham—A Free Weighted Histogram Analysis Implementation Including Robust Error and Autocorrelation Estimates
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November 2010 |
Enhanced sampling simulation analysis of the structure of lignin in the THF–water miscibility gap
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January 2016 |
Summary of Biomass Pretreatment Methods
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book
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January 2016 |
Cosolvent pretreatment in cellulosic biofuel production: effect of tetrahydrofuran-water on lignin structure and dynamics
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journal
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January 2016 |
GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
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September 2015 |