A short history of structure based research on the photocycle of photoactive yellow protein
- Authors:
- Publication Date:
- Research Org.:
- Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
- Sponsoring Org.:
- National Science Foundation (NSF)
- OSTI Identifier:
- 1414462
- Resource Type:
- Journal Article
- Journal Name:
- Structural Dynamics
- Additional Journal Information:
- Journal Volume: 4; Journal Issue: 3; Journal ID: ISSN 2329-7778
- Publisher:
- American Crystallographic Association/AIP
- Country of Publication:
- United States
- Language:
- ENGLISH
Citation Formats
Schmidt, Marius. A short history of structure based research on the photocycle of photoactive yellow protein. United States: N. p., 2017.
Web. doi:10.1063/1.4974172.
Schmidt, Marius. A short history of structure based research on the photocycle of photoactive yellow protein. United States. doi:10.1063/1.4974172.
Schmidt, Marius. Mon .
"A short history of structure based research on the photocycle of photoactive yellow protein". United States. doi:10.1063/1.4974172.
@article{osti_1414462,
title = {A short history of structure based research on the photocycle of photoactive yellow protein},
author = {Schmidt, Marius},
abstractNote = {},
doi = {10.1063/1.4974172},
journal = {Structural Dynamics},
issn = {2329-7778},
number = 3,
volume = 4,
place = {United States},
year = {2017},
month = {5}
}
DOI: 10.1063/1.4974172
Other availability
Save to My Library
You must Sign In or Create an Account in order to save documents to your library.
Works referenced in this record:
Protein Conformational Relaxation and Ligand Migration in Myoglobin: A Nanosecond to Millisecond Molecular Movie from Time-Resolved Laue X-ray Diffraction †
journal, November 2001
- Šrajer, Vukica; Ren, Zhong; Teng, Tsu-Yi
- Biochemistry, Vol. 40, Issue 46
Energy Transduction on the Nanosecond Time Scale: Early Structural Events in a Xanthopsin Photocycle
journal, March 1998
- Perman, B.
- Science, Vol. 279, Issue 5358
BioCARS: a synchrotron resource for time-resolved X-ray science
journal, May 2011
- Graber, T.; Anderson, S.; Brewer, H.
- Journal of Synchrotron Radiation, Vol. 18, Issue 4
Influence of the Crystalline State on Photoinduced Dynamics of Photoactive Yellow Protein Studied by Ultraviolet-Visible Transient Absorption Spectroscopy
journal, June 2006
- Yeremenko, Sergey; van Stokkum, Ivo H. M.; Moffat, Keith
- Biophysical Journal, Vol. 90, Issue 11
Room temperature structures beyond 1.5 Å by serial femtosecond crystallography
journal, May 2015
- Schmidt, Marius; Pande, Kanupriya; Basu, Shibom
- Structural Dynamics, Vol. 2, Issue 4
Spectroscopic Studies of Model Photo-Receptors: Validation of a Nanosecond Time-Resolved Micro-Spectrophotometer Design Using Photoactive Yellow Protein and α-Phycoerythrocyanin
journal, September 2013
- Purwar, Namrta; Tenboer, Jason; Tripathi, Shailesh
- International Journal of Molecular Sciences, Vol. 14, Issue 9
High-Resolution Protein Structure Determination by Serial Femtosecond Crystallography
journal, May 2012
- Boutet, S.; Lomb, L.; Williams, G. J.
- Science, Vol. 337, Issue 6092
Coherent oscillations in ultrafast fluorescence of photoactive yellow protein
journal, December 2007
- Nakamura, Ryosuke; Hamada, Norio; Ichida, Hideki
- The Journal of Chemical Physics, Vol. 127, Issue 21
New Photocycle Intermediates in the Photoactive Yellow Protein from Ectothiorhodospira halophila: Picosecond Transient Absorption Spectroscopy
journal, July 1998
- Ujj, L.; Devanathan, S.; Meyer, T. E.
- Biophysical Journal, Vol. 75, Issue 1
Structure at 0.85 Å resolution of an early protein photocycle intermediate
journal, March 1998
- Genick, Ulrich K.; Soltis, S. Michael; Kuhn, Peter
- Nature, Vol. 392, Issue 6672
Femtosecond Spectroscopic Observations of Initial Intermediates in the Photocycle of the Photoactive Yellow Protein from Ectothiorhodospira halophila
journal, August 1999
- Devanathan, Savitha; Pacheco, Andrew; Ujj, Laszlo
- Biophysical Journal, Vol. 77, Issue 2
Ligand migration pathway and protein dynamics in myoglobin: A time-resolved crystallographic study on L29W MbCO
journal, August 2005
- Schmidt, M.; Nienhaus, K.; Pahl, R.
- Proceedings of the National Academy of Sciences, Vol. 102, Issue 33
Five-dimensional crystallography
journal, February 2010
- Schmidt, Marius; Graber, Tim; Henning, Robert
- Acta Crystallographica Section A Foundations of Crystallography, Vol. 66, Issue 2
Time-resolved serial crystallography captures high-resolution intermediates of photoactive yellow protein
journal, December 2014
- Tenboer, Jason; Basu, Shibom; Zatsepin, Nadia
- Science, Vol. 346, Issue 6214
Photocycle populations with femtosecond excitation of crystalline photoactive yellow protein
journal, June 2016
- Hutchison, Christopher D. M.; Kaucikas, Marius; Tenboer, Jason
- Chemical Physics Letters, Vol. 654
Volume-conserving trans–cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
journal, February 2013
- Jung, Yang Ouk; Lee, Jae Hyuk; Kim, Joonghan
- Nature Chemistry, Vol. 5, Issue 3
Protein Structural Dynamics of Photoactive Yellow Protein in Solution Revealed by Pump–Probe X-ray Solution Scattering
journal, February 2012
- Kim, Tae Wu; Lee, Jae Hyuk; Choi, Jungkweon
- Journal of the American Chemical Society, Vol. 134, Issue 6
X-ray Laue Diffraction from Protein Crystals
journal, March 1984
- Moffat, K.; Szebenyi, D.; Bilderback, D.
- Science, Vol. 223, Issue 4643
Formation of a New Buried Charge Drives a Large-Amplitude Protein Quake in Photoreceptor Activation †
journal, February 2001
- Xie, Aihua; Kelemen, Lorand; Hendriks, Johnny
- Biochemistry, Vol. 40, Issue 6
From The Cover: Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds
journal, May 2005
- Ihee, H.; Rajagopal, S.; Srajer, V.
- Proceedings of the National Academy of Sciences, Vol. 102, Issue 20
Observation of Decreased Radiation Damage at Higher Dose Rates in Room Temperature Protein Crystallography
journal, December 2007
- Southworth-Davies, Robert J.; Medina, Melissa A.; Carmichael, Ian
- Structure, Vol. 15, Issue 12
Photoisomerisation quantum yield and non-linear cross-sections with femtosecond excitation of the photoactive yellow protein
journal, January 2012
- Lincoln, Craig N.; Fitzpatrick, Ann E.; Thor, Jasper J. van
- Physical Chemistry Chemical Physics, Vol. 14, Issue 45
Application of Singular Value Decomposition to the Analysis of Time-Resolved Macromolecular X-Ray Data
journal, March 2003
- Schmidt, Marius; Rajagopal, Sudarshan; Ren, Zhong
- Biophysical Journal, Vol. 84, Issue 3
Photoactivation of the Photoactive Yellow Protein: Why Photon Absorption Triggers a Trans-to-Cis Isomerization of the Chromophore in the Protein
journal, April 2004
- Groenhof, Gerrit; Bouxin-Cademartory, Mathieu; Hess, Berk
- Journal of the American Chemical Society, Vol. 126, Issue 13
Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography
journal, November 2012
- Schotte, F.; Cho, H. S.; Kaila, V. R. I.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 47
1.4 .ANG. Structure of Photoactive Yellow Protein, a Cytosolic Photoreceptor: Unusual Fold, Active Site, and Chromophore
journal, May 1995
- Borgstahl, Gloria E. O.; Williams, DeWight R.; Getzoff, Elizabeth D.
- Biochemistry, Vol. 34, Issue 19
New software for the singular value decomposition of time-resolved crystallographic data
journal, June 2009
- Zhao, Yi; Schmidt, Marius
- Journal of Applied Crystallography, Vol. 42, Issue 4
Extended subnanosecond structural dynamics of myoglobin revealed by Laue crystallography
journal, March 2006
- Bourgeois, D.; Vallone, B.; Arcovito, A.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 13
Short hydrogen bonds in photoactive yellow protein
journal, May 2004
- Anderson, Spencer; Crosson, Sean; Moffat, Keith
- Acta Crystallographica Section D Biological Crystallography, Vol. 60, Issue 6
Femtosecond structural dynamics drives the trans/cis isomerization in photoactive yellow protein
journal, May 2016
- Pande, K.; Hutchison, C. D. M.; Groenhof, G.
- Science, Vol. 352, Issue 6286
The Short-Lived Signaling State of the Photoactive Yellow Protein Photoreceptor Revealed by Combined Structural Probes
journal, June 2011
- Ramachandran, Pradeep L.; Lovett, Janet E.; Carl, Patrick J.
- Journal of the American Chemical Society, Vol. 133, Issue 24
The Activated Complex in Chemical Reactions
journal, February 1935
- Eyring, Henry
- The Journal of Chemical Physics, Vol. 3, Issue 2
A Molecular Movie at 1.8 Å Resolution Displays the Photocycle of Photoactive Yellow Protein, a Eubacterial Blue-Light Receptor, from Nanoseconds to Seconds †
journal, November 2001
- Ren, Zhong; Perman, Benjamin; Šrajer, Vukica
- Biochemistry, Vol. 40, Issue 46
Structure of a Protein Photocycle Intermediate by Millisecond Time-Resolved Crystallography
journal, March 1997
- Genick, U. K.
- Science, Vol. 275, Issue 5305
A micro-patterned silicon chip as sample holder for macromolecular crystallography experiments with minimal background scattering
journal, May 2015
- Roedig, P.; Vartiainen, I.; Duman, R.
- Scientific Reports, Vol. 5, Issue 1
Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
journal, March 2004
- Schmidt, M.; Pahl, R.; Srajer, V.
- Proceedings of the National Academy of Sciences, Vol. 101, Issue 14
Experimental determination of the radiation dose limit for cryocooled protein crystals
journal, March 2006
- Owen, R. L.; Rudino-Pinera, E.; Garman, E. F.
- Proceedings of the National Academy of Sciences, Vol. 103, Issue 13
Spectral encoding of x-ray/optical relative delay
journal, January 2011
- Bionta, Mina R.; Lemke, H. T.; Cryan, J. P.
- Optics Express, Vol. 19, Issue 22
Protein energy landscapes determined by five-dimensional crystallography
journal, November 2013
- Schmidt, Marius; Srajer, Vukica; Henning, Robert
- Acta Crystallographica Section D Biological Crystallography, Vol. 69, Issue 12
Microcrystallization techniques for serial femtosecond crystallography using photosystem II from Thermosynechococcus elongatus as a model system
journal, July 2014
- Kupitz, Christopher; Grotjohann, Ingo; Conrad, Chelsie E.
- Philosophical Transactions of the Royal Society B: Biological Sciences, Vol. 369, Issue 1647
Laue crystallography: coming of age
journal, July 1999
- Ren, Zhong; Bourgeois, Dominique; Helliwell, John R.
- Journal of Synchrotron Radiation, Vol. 6, Issue 4
Photolysis of the Carbon Monoxide Complex of Myoglobin: Nanosecond Time-Resolved Crystallography
journal, December 1996
- Srajer, V.; Teng, T. -y.; Ursby, T.
- Science, Vol. 274, Issue 5293
The kinetic dose limit in room-temperature time-resolved macromolecular crystallography
journal, January 2012
- Schmidt, M.; Šrajer, V.; Purwar, N.
- Journal of Synchrotron Radiation, Vol. 19, Issue 2
Chromophore Dynamics in the PYP Photocycle from Femtosecond Stimulated Raman Spectroscopy
journal, January 2014
- Creelman, Mark; Kumauchi, Masato; Hoff, Wouter D.
- The Journal of Physical Chemistry B, Vol. 118, Issue 3
Analysis of experimental time-resolved crystallographic data by singular value decomposition
journal, April 2004
- Rajagopal, Sudarshan; Schmidt, Marius; Anderson, Spencer
- Acta Crystallographica Section D Biological Crystallography, Vol. 60, Issue 5