Alignment Solution for CT Image Reconstruction using Fixed Point and Virtual Rotation Axis

Jun, Kyungtaek; Yoon, Seokhwan

doi:10.1038/srep41218

Title: Alignment Solution for CT Image Reconstruction using Fixed Point and Virtual Rotation Axis

Journal Article · Wed Jan 25 00:00:00 EST 2017 · Scientific Reports

DOI:https://doi.org/10.1038/srep41218· OSTI ID:1409522

Jun, Kyungtaek; Yoon, Seokhwan

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Research Organization:: Brookhaven National Lab. (BNL), Upton, NY (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES)

DOE Contract Number:: SC0012704

OSTI ID:: 1409522

Report Number(s):: BNL-114574-2017-JA¿¿¿

Journal Information:: Scientific Reports, Vol. 7; ISSN 2045-2322

Publisher:: Nature Publishing Group

Country of Publication:: United States

Language:: English

References (23)

Computed tomography of cryogenic biological specimens based on X-ray microscopic images Weiß, D.; Schneider, G.; Niemann, B. Ultramicroscopy, Vol. 84, Issue 3-4 https://doi.org/10.1016/S0304-3991(00)00034-6	journal	August 2000
Soft X-ray tomography of phenotypic switching and the cellular response to antifungal peptoids in Candida albicans Uchida, M.; McDermott, G.; Wetzler, M. Proceedings of the National Academy of Sciences, Vol. 106, Issue 46 https://doi.org/10.1073/pnas.0906145106	journal	October 2009
Registration of the rotation axis in X-ray tomography Yang, Yimeng; Yang, Feifei; Hingerl, Ferdinand F. Journal of Synchrotron Radiation, Vol. 22, Issue 2 https://doi.org/10.1107/S160057751402726X	journal	February 2015
TomoPy: a framework for the analysis of synchrotron tomographic data Gürsoy, Dogˇa; De Carlo, Francesco; Xiao, Xianghui Journal of Synchrotron Radiation, Vol. 21, Issue 5 https://doi.org/10.1107/S1600577514013939	journal	August 2014
Cryo-X-ray tomography of vaccinia virus membranes and inner compartments Carrascosa, José L.; Chichón, Francisco Javier; Pereiro, Eva Journal of Structural Biology, Vol. 168, Issue 2 https://doi.org/10.1016/j.jsb.2009.07.009	journal	November 2009
XMIPP: a new generation of an open-source image processing package for electron microscopy Sorzano, C. O. S.; Marabini, R.; Velázquez-Muriel, J. Journal of Structural Biology, Vol. 148, Issue 2 https://doi.org/10.1016/j.jsb.2004.06.006	journal	November 2004
A high-throughput x-ray microtomography system at the Advanced Photon Source Wang, Yuxin; De Carlo, Francesco; Mancini, Derrick C. Review of Scientific Instruments, Vol. 72, Issue 4 https://doi.org/10.1063/1.1355270	journal	April 2001
Photon mass attenuation and energy-absorption coefficients Hubbell, J. H. The International Journal of Applied Radiation and Isotopes, Vol. 33, Issue 11 https://doi.org/10.1016/0020-708X(82)90248-4	journal	November 1982
Reliable method for calculating the center of rotation in parallel-beam tomography Vo, Nghia T.; Drakopoulos, Michael; Atwood, Robert C. Optics Express, Vol. 22, Issue 16 https://doi.org/10.1364/OE.22.019078	journal	January 2014
Quantitative analysis of yeast internal architecture using soft X-ray tomography Uchida, Maho; Sun, Yidi; McDermott, Gerry Yeast, Vol. 28, Issue 3 https://doi.org/10.1002/yea.1834	journal	December 2010
Godfrey N. Hounsfield und die Folgen Bautz, W.; Kalender, W. Der Radiologe, Vol. 45, Issue 4 https://doi.org/10.1007/s00117-005-1200-7	journal	April 2005
X-ray tomography of whole cells Le Gros, Mark A.; McDermott, Gerry; Larabell, Carolyn A. Current Opinion in Structural Biology, Vol. 15, Issue 5 https://doi.org/10.1016/j.sbi.2005.08.008	journal	October 2005
High resolution protein localization using soft X-ray microscopy Meyer-Ilse, W.; Hamamoto, D.; Nair, A. Journal of Microscopy, Vol. 201, Issue 3 https://doi.org/10.1046/j.1365-2818.2001.00845.x	journal	March 2001
Three-dimensional cellular ultrastructure resolved by X-ray microscopy Schneider, Gerd; Guttmann, Peter; Heim, Stefan Nature Methods, Vol. 7, Issue 12 https://doi.org/10.1038/nmeth.1533	journal	November 2010
Nanoscale elemental sensitivity study of Nd ₂ Fe ₁₄ B using absorption correlation tomography : Nanoscale Elemental Sensitivity Study of N Kao, Thomas L.; Shi, Crystal Y.; Wang, Junyue Microscopy Research and Technique, Vol. 76, Issue 11 https://doi.org/10.1002/jemt.22273	journal	August 2013
IVE (Image Visualization Environment): A Software Platform for All Three-Dimensional Microscopy Applications Chen, Hans; Hughes, Diana D.; Chan, Tan-An Journal of Structural Biology, Vol. 116, Issue 1 https://doi.org/10.1006/jsbi.1996.0010	journal	January 1996
UCSF tomography: An integrated software suite for real-time electron microscopic tomographic data collection, alignment, and reconstruction Zheng, Shawn Q.; Keszthelyi, Bettina; Branlund, Eric Journal of Structural Biology, Vol. 157, Issue 1 https://doi.org/10.1016/j.jsb.2006.06.005	journal	January 2007
Computer Visualization of Three-Dimensional Image Data Using IMOD Kremer, James R.; Mastronarde, David N.; McIntosh, J. Richard Journal of Structural Biology, Vol. 116, Issue 1 https://doi.org/10.1006/jsbi.1996.0013	journal	January 1996
Automatic alignment and reconstruction of images for soft X-ray tomography Parkinson, Dilworth Y.; Knoechel, Christian; Yang, Chao Journal of Structural Biology, Vol. 177, Issue 2 https://doi.org/10.1016/j.jsb.2011.11.027	journal	February 2012
Markov random field based automatic image alignment for electron tomography Amat, Fernando; Moussavi, Farshid; Comolli, Luis R. Journal of Structural Biology, Vol. 161, Issue 3 https://doi.org/10.1016/j.jsb.2007.07.007	journal	March 2008
Automated determination of the center of rotation in tomography data Donath, Tilman; Beckmann, Felix; Schreyer, Andreas Journal of the Optical Society of America A, Vol. 23, Issue 5 https://doi.org/10.1364/JOSAA.23.001048	journal	January 2006
Soft X-ray tomography and cryogenic light microscopy: the cool combination in cellular imaging McDermott, Gerry; Le Gros, Mark A.; Knoechel, Christian G. Trends in Cell Biology, Vol. 19, Issue 11 https://doi.org/10.1016/j.tcb.2009.08.005	journal	November 2009
A marker-free alignment method for electron tomography Liu, Yu; Penczek, Pawel A.; McEwen, Bruce F. Ultramicroscopy, Vol. 58, Issue 3-4 https://doi.org/10.1016/0304-3991(95)00006-M	journal	June 1995

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