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Title: Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803

Authors:
; ; ; ; ; ; ; ;
Publication Date:
Research Org.:
Energy Frontier Research Centers (EFRC) (United States). Photosynthetic Antenna Research Center (PARC)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES) (SC-22)
OSTI Identifier:
1388566
DOE Contract Number:  
SC0001035
Resource Type:
Journal Article
Journal Name:
PLoS ONE
Additional Journal Information:
Journal Volume: 12; Journal Issue: 3; Related Information: PARC partners with Washington University in St. Louis (lead); University of California, Riverside; University of Glasgow, UK; Los Alamos National Laboratory; University of New Mexico; New Mexico Corsortium; North Carolina State University; Northwestern University; Oak Ridge National Laboratory; University of Pennsylvania; Sandia National Laboratories; University of Sheffield, UK; Journal ID: ISSN 1932-6203
Publisher:
Public Library of Science
Country of Publication:
United States
Language:
English
Subject:
solar (fuels), photosynthesis (natural and artificial), biofuels (including algae and biomass), bio-inspired, charge transport, membrane, synthesis (novel materials), synthesis (self-assembly)

Citation Formats

Liberton, Michelle, Chrisler, William B., Nicora, Carrie D., Moore, Ronald J., Smith, Richard D., Koppenaal, David W., Pakrasi, Himadri B., Jacobs, Jon M., and Chauvat, Franck. Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803. United States: N. p., 2017. Web. doi:10.1371/journal.pone.0173251.
Liberton, Michelle, Chrisler, William B., Nicora, Carrie D., Moore, Ronald J., Smith, Richard D., Koppenaal, David W., Pakrasi, Himadri B., Jacobs, Jon M., & Chauvat, Franck. Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803. United States. doi:10.1371/journal.pone.0173251.
Liberton, Michelle, Chrisler, William B., Nicora, Carrie D., Moore, Ronald J., Smith, Richard D., Koppenaal, David W., Pakrasi, Himadri B., Jacobs, Jon M., and Chauvat, Franck. Thu . "Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803". United States. doi:10.1371/journal.pone.0173251.
@article{osti_1388566,
title = {Phycobilisome truncation causes widespread proteome changes in Synechocystis sp. PCC 6803},
author = {Liberton, Michelle and Chrisler, William B. and Nicora, Carrie D. and Moore, Ronald J. and Smith, Richard D. and Koppenaal, David W. and Pakrasi, Himadri B. and Jacobs, Jon M. and Chauvat, Franck},
abstractNote = {},
doi = {10.1371/journal.pone.0173251},
journal = {PLoS ONE},
issn = {1932-6203},
number = 3,
volume = 12,
place = {United States},
year = {2017},
month = {3}
}

Works referenced in this record:

Global Proteomics Reveal an Atypical Strategy for Carbon/Nitrogen Assimilation by a Cyanobacterium Under Diverse Environmental Perturbations
journal, September 2010

  • Wegener, Kimberly M.; Singh, Abhay K.; Jacobs, Jon M.
  • Molecular & Cellular Proteomics, Vol. 9, Issue 12
  • DOI: 10.1074/mcp.M110.000109

Simple Conditions for Growth of Unicellular Blue-Green Algae on Plates
journal, March 1968


A Mechanism of Energy Dissipation in Cyanobacteria
journal, March 2009


Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry
journal, February 2007

  • Elias, Joshua E.; Gygi, Steven P.
  • Nature Methods, Vol. 4, Issue 3
  • DOI: 10.1038/nmeth1019

DAnTE: a statistical tool for quantitative analysis of -omics data
journal, May 2008


A giant chlorophyll–protein complex induced by iron deficiency in cyanobacteria
journal, August 2001

  • Boekema, E. J.; Hifney, A.; Yakushevska, A. E.
  • Nature, Vol. 412, Issue 6848
  • DOI: 10.1038/35089104

The sll1951 Gene Encodes the Surface Layer Protein of Synechocystis sp. Strain PCC 6803
journal, September 2013

  • Trautner, C.; Vermaas, W. F. J.
  • Journal of Bacteriology, Vol. 195, Issue 23
  • DOI: 10.1128/JB.00615-13

Phycobilisome-Deficient Strains of Synechocystis sp. PCC 6803 Have Reduced Size and Require Carbon-Limiting Conditions to Exhibit Enhanced Productivity
journal, April 2014

  • Lea-Smith, David J.; Bombelli, Paolo; Dennis, John S.
  • Plant Physiology, Vol. 165, Issue 2
  • DOI: 10.1104/pp.114.237206

Phycobilisome core mutants of Synechocystis PCC 6803
journal, September 1995

  • Ajlani, Ghada; Vernotte, Claudie; DiMagno, Lisa
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1231, Issue 2
  • DOI: 10.1016/0005-2728(95)00086-X

Universal sample preparation method for proteome analysis
journal, April 2009

  • Wiśniewski, Jacek R.; Zougman, Alexandre; Nagaraj, Nagarjuna
  • Nature Methods, Vol. 6, Issue 5
  • DOI: 10.1038/nmeth.1322

Phycobilisome rod mutants in Synechocystis sp. strain PCC6803
journal, December 2004


Chlorosis induced by nutrient deprivation in Synechococcus sp. strain PCC 7942: not all bleaching is the same.
journal, July 1992


Awakening of a Dormant Cyanobacterium from Nitrogen Chlorosis Reveals a Genetically Determined Program
journal, November 2016


Nitrogen Control in Cyanobacteria
journal, January 2001


Organization and Flexibility of Cyanobacterial Thylakoid Membranes Examined by Neutron Scattering
journal, December 2012

  • Liberton, Michelle; Page, Lawrence E.; O'Dell, William B.
  • Journal of Biological Chemistry, Vol. 288, Issue 5
  • DOI: 10.1074/jbc.M112.416933

ProteomeXchange provides globally coordinated proteomics data submission and dissemination
journal, March 2014

  • Vizcaíno, Juan A.; Deutsch, Eric W.; Wang, Rui
  • Nature Biotechnology, Vol. 32, Issue 3
  • DOI: 10.1038/nbt.2839

Integrin α- and β4-subunit-domain homologues in cyanobacterial proteins
journal, January 1999


Maximizing photosynthetic efficiency and culture productivity in cyanobacteria upon minimizing the phycobilisome light-harvesting antenna size
journal, October 2014

  • Kirst, Henning; Formighieri, Cinzia; Melis, Anastasios
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1837, Issue 10
  • DOI: 10.1016/j.bbabio.2014.07.009

Truncated Photosystem Chlorophyll Antenna Size in the Green Microalga Chlamydomonas reinhardtii upon Deletion of the TLA3-CpSRP43 Gene
journal, October 2012

  • Kirst, Henning; Garcia-Cerdan, Jose Gines; Zurbriggen, Andreas
  • Plant Physiology, Vol. 160, Issue 4
  • DOI: 10.1104/pp.112.206672

Probability-Based Evaluation of Peptide and Protein Identifications from Tandem Mass Spectrometry and SEQUEST Analysis:  The Human Proteome
journal, February 2005

  • Qian, Wei-Jun; Liu, Tao; Monroe, Matthew E.
  • Journal of Proteome Research, Vol. 4, Issue 1
  • DOI: 10.1021/pr0498638

A second isoform of the ferredoxin:NADP oxidoreductase generated by an in-frame initiation of translation
journal, November 2006

  • Thomas, J. -C.; Ughy, B.; Lagoutte, B.
  • Proceedings of the National Academy of Sciences, Vol. 103, Issue 48
  • DOI: 10.1073/pnas.0607718103

Reflections on the function of IsiA, a cyanobacterial stress-inducible, Chl-binding protein
journal, March 2007


Chemically Etched Open Tubular and Monolithic Emitters for Nanoelectrospray Ionization Mass Spectrometry
journal, November 2006

  • Kelly, Ryan T.; Page, Jason S.; Luo, Quanzhou
  • Analytical Chemistry, Vol. 78, Issue 22, p. 7796-7801
  • DOI: 10.1021/ac061133r

Probing the consequences of antenna modification in cyanobacteria
journal, October 2013

  • Liberton, Michelle; Collins, Aaron M.; Page, Lawrence E.
  • Photosynthesis Research, Vol. 118, Issue 1-2
  • DOI: 10.1007/s11120-013-9940-0

Reversible membrane reorganizations during photosynthesis in vivo: revealed by small-angle neutron scattering
journal, May 2011

  • Nagy, Gergely; Posselt, Dorthe; Kovács, László
  • Biochemical Journal, Vol. 436, Issue 2
  • DOI: 10.1042/BJ20110180

Critical Roles of Bacterioferritins in Iron Storage and Proliferation of Cyanobacteria
journal, July 2004

  • Keren, Nir; Aurora, Rajeev; Pakrasi, Himadri B.
  • Plant Physiology, Vol. 135, Issue 3
  • DOI: 10.1104/pp.104.042770

Reduced light-harvesting antenna: Consequences on cyanobacterial metabolism and photosynthetic productivity
journal, July 2013


Reduction of Photoautotrophic Productivity in the Cyanobacterium Synechocystis sp. Strain PCC 6803 by Phycobilisome Antenna Truncation
journal, June 2012

  • Page, Lawrence E.; Liberton, Michelle; Pakrasi, Himadri B.
  • Applied and Environmental Microbiology, Vol. 78, Issue 17
  • DOI: 10.1128/AEM.00499-12

Spectral Probabilities and Generating Functions of Tandem Mass Spectra: A Strike against Decoy Databases
journal, August 2008

  • Kim, Sangtae; Gupta, Nitin; Pevzner, Pavel A.
  • Journal of Proteome Research, Vol. 7, Issue 8
  • DOI: 10.1021/pr8001244

PsaL subunit is required for the formation of photosystem I trimers in the cyanobacterium Synechocystis sp. PCC 6803
journal, December 1993


Iron deficiency induces the formation of an antenna ring around trimeric photosystem I in cyanobacteria
journal, August 2001

  • Bibby, Thomas S.; Nield, Jon; Barber, James
  • Nature, Vol. 412, Issue 6848
  • DOI: 10.1038/35089098

Ultrastructure and light adaptation of phycobilisome mutants of Synechocystis PCC 6803
journal, April 1997

  • Olive, Jacqueline; Ajlani, Ghada; Astier, Chantal
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1319, Issue 2-3
  • DOI: 10.1016/S0005-2728(96)00168-5

Towards efficient hydrogen production: the impact of antenna size and external factors on electron transport dynamics in Synechocystis PCC 6803
journal, January 2009

  • Bernát, Gábor; Waschewski, Nadine; Rögner, Matthias
  • Photosynthesis Research, Vol. 99, Issue 3
  • DOI: 10.1007/s11120-008-9398-7

Photosynthetic Pigment Localization and Thylakoid Membrane Morphology Are Altered in Synechocystis 6803 Phycobilisome Mutants
journal, February 2012

  • Collins, Aaron M.; Liberton, Michelle; Jones, Howland D. T.
  • Plant Physiology, Vol. 158, Issue 4
  • DOI: 10.1104/pp.111.192849

Self-made frits for nanoscale columns in proteomics
journal, October 2005

  • Maiolica, Alessio; Borsotti, Dario; Rappsilber, Juri
  • PROTEOMICS, Vol. 5, Issue 15
  • DOI: 10.1002/pmic.200402010

Genes Essential to Iron Transport in the Cyanobacterium Synechocystis sp. Strain PCC 6803
journal, May 2001


Light-Induced Energy Dissipation in Iron-Starved Cyanobacteria: Roles of OCP and IsiA Proteins
journal, February 2007

  • Wilson, Adjélé; Boulay, Clémence; Wilde, Annegret
  • The Plant Cell, Vol. 19, Issue 2
  • DOI: 10.1105/tpc.106.045351

Structural organisation of phycobilisomes from Synechocystis sp. strain PCC6803 and their interaction with the membrane
journal, April 2009

  • Arteni, Ana A.; Ajlani, Ghada; Boekema, Egbert J.
  • Biochimica et Biophysica Acta (BBA) - Bioenergetics, Vol. 1787, Issue 4
  • DOI: 10.1016/j.bbabio.2009.01.009

    Works referencing / citing this record:

    The primary transcriptome of the fast-growing cyanobacterium Synechococcus elongatus UTEX 2973
    journal, August 2018