skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Phylogenetic analysis of pectin-related gene families in Physcomitrella patens and nine other plant species yields evolutionary insights into cell walls

Journal Article · · BMC Plant Biology
; ; ; ;

Research Organization:
Energy Frontier Research Centers (EFRC) (United States). Center for Lignocellulose Structure and Formation (CLSF)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
DOE Contract Number:
SC0001090
OSTI ID:
1385118
Journal Information:
BMC Plant Biology, Vol. 14, Issue 1; Related Information: CLSF partners with Pennsylvania State University (lead); North Carolina State University; University of Rhode Island; Virginia Tech University; ISSN 1471-2229
Publisher:
BioMed Central
Country of Publication:
United States
Language:
English

References (52)

New insights into pectin methylesterase structure and function journal June 2007
Pectin Biosynthesis: GALS1 in Arabidopsis thaliana Is a β-1,4-Galactan β-1,4-Galactosyltransferase journal December 2012
The mechanism of gene targeting in Physcomitrella patens: homologous recombination, concatenation and multiple integration journal November 2006
A pectin glucuronyltransferase gene is essential for intercellular attachment in the plant meristem journal November 2002
Organ‐specific, developmental, hormonal and stress regulation of expression of putative pectate lyase genes in Arabidopsis journal March 2007
Both chloronemal and caulonemal cells expand by tip growth in the moss Physcomitrella patens journal April 2007
Demethylesterification of the Primary Wall by PECTIN METHYLESTERASE35 Provides Mechanical Support to the Arabidopsis Stem journal June 2012
Molecular evolution and expression divergence of the Populus polygalacturonase supergene family shed light on the evolution of increasingly complex organs in plants journal January 2013
Homogalacturonan synthesis in Arabidopsis thaliana requires a Golgi-localized protein with a putative methyltransferase domain: Homogalacturonan synthesis in Arabidopsis: journal April 2007
Structure and Biogenesis of the cell Walls of Grasses journal June 1996
Molecular Basis of Ca 2+ -Induced Gelation in Alginates and Pectins:  The Egg-Box Model Revisited journal December 2001
Physcomitrella patens: mosses enter the genomic age journal April 2007
The TUMOROUS SHOOT DEVELOPMENT2 gene of Arabidopsis encoding a putative methyltransferase is required for cell adhesion and co-ordinated plant development: The Arabidopsis TSD2 gene journal April 2007
Molecular Analysis of a Family of Arabidopsis Genes Related to Galacturonosyltransferases journal February 2011
Structural models of primary cell walls in flowering plants: consistency of molecular structure with the physical properties of the walls during growth journal January 1993
Occurrence of the Primary Cell Wall Polysaccharide Rhamnogalacturonan II in Pteridophytes, Lycophytes, and Bryophytes. Implications for the Evolution of Vascular Plants journal December 2003
Ancestral polyploidy in seed plants and angiosperms journal April 2011
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models journal August 2006
High-throughput mapping of cell-wall polymers within and between plants using novel microarrays: Glycan microarrays for plant cell-wall analysis journal June 2007
Restricted cell elongation in Arabidopsis hypocotyls is associated with a reduced average pectin esterification level journal January 2007
OrthoMCL: Identification of Ortholog Groups for Eukaryotic Genomes journal September 2003
Functional characterisation of a putative rhamnogalacturonan II specific xylosyltransferase journal August 2008
Rhamnogalacturonan-II, a Pectic Polysaccharide in the Walls of Growing Plant Cell, Forms a Dimer That Is Covalently Cross-linked by a Borate Ester journal September 1996
Evolution and Function of the Plant Cell Wall Synthesis-Related Glycosyltransferase Family 8 journal June 2010
A CELLULOSE SYNTHASE (CESA) gene essential for gametophore morphogenesis in the moss Physcomitrella patens journal January 2012
The Physcomitrella Genome Reveals Evolutionary Insights into the Conquest of Land by Plants journal December 2007
Overexpression of Polygalacturonase in Transgenic Apple Trees Leads to a Range of Novel Phenotypes Involving Changes in Cell Adhesion journal May 2002
Arabidopsis thaliana T-DNA Mutants Implicate GAUT Genes in the Biosynthesis of Pectin and Xylan in Cell Walls and Seed Testa journal September 2009
Polygalacturonases: Many Genes in Search of a Function journal June 1998
Expression of polygalacturonases and evidence to support their role during cell separation processes in Arabidopsis thaliana journal October 2007
Pectin-Induced Changes in Cell Wall Mechanics Underlie Organ Initiation in Arabidopsis journal October 2011
Loss-of-Function Mutation of REDUCED WALL ACETYLATION2 in Arabidopsis Leads to Reduced Cell Wall Acetylation and Increased Resistance to Botrytis cinerea journal January 2011
Glycosyl transferases in family 61 mediate arabinofuranosyl transfer onto xylan in grasses journal January 2012
Homogalacturonan Methyl-Esterification and Plant Development journal September 2009
Galacturonosyltransferase (GAUT)1 and GAUT7 are the core of a plant cell wall pectin biosynthetic homogalacturonan:galacturonosyltransferase complex journal November 2011
Arabinogalactan Proteins Are Required for Apical Cell Extension in the Moss Physcomitrella patens journal September 2005
The structure and biochemistry of charophycean cell walls: I. Pectins of Penium margaritaceum journal November 2006
Identification of a Xylogalacturonan Xylosyltransferase Involved in Pectin Biosynthesis in Arabidopsis journal May 2008
Requirement of Borate Cross-Linking of Cell Wall Rhamnogalacturonan II for Arabidopsis Growth journal October 2001
The PARVUS Gene is Expressed in Cells Undergoing Secondary Wall Thickening and is Essential for Glucuronoxylan Biosynthesis journal December 2007
Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase journal March 2006
The Glycosyltransferase Repertoire of the Spikemoss Selaginella moellendorffii and a Comparative Study of Its Cell Wall journal May 2012
A complex plant cell wall polysaccharide: rhamnogalacturonan II. A structure in quest of a function journal January 2003
Altered Middle Lamella Homogalacturonan and Disrupted Deposition of (1→5)-α-l-Arabinan in the Pericarp of Cnr , a Ripening Mutant of Tomato journal May 2001
MUSCLE: multiple sequence alignment with high accuracy and high throughput journal March 2004
Elaborate spatial patterning of cell-wall PME and PMEI at the pollen tube tip involves PMEI endocytosis, and reflects the distribution of esterified and de-esterified pectins journal January 2008
Pectin and the role of the physical properties of the cell wall in pollen tube growth of Solanum chacoense journal September 2004
Biosynthesis of Pectin journal April 2010
Pectin structure and biosynthesis journal June 2008
A Comparative Genome Analysis of PME and PMEI Families Reveals the Evolution of Pectin Metabolism in Plant Cell Walls journal August 2013
Broad Phylogenomic Sampling and the Sister Lineage of Land Plants journal January 2012
Evolution of Plant Nucleotide-Sugar Interconversion Enzymes journal November 2011

Similar Records

Phylogenetic analysis of pectin-related gene families in Physcomitrella patens and nine other plant species yields evolutionary insights into cell walls
Journal Article · Wed Jan 01 00:00:00 EST 2014 · BMC Plant Biol. · OSTI ID:1385118
+2 more
Immuno and Affinity Cytochemical Analysis of Cell Wall Composition in the Moss Physcomitrella patens
Journal Article · Tue Mar 08 00:00:00 EST 2016 · Frontiers in Plant Science · OSTI ID:1385118
+3 more
Knocking Out the Wall: Revised Protocols for Gene Targeting in Physcomitrella patens
Journal Article · Fri Jul 03 00:00:00 EDT 2020 · Methods in Molecular Biology · OSTI ID:1385118
+3 more

Related Subjects

biofuels (including algae and biomass)
bio-inspired
membrane
carbon sequestration
materials and chemistry by design
synthesis (self-assembly)