Challenges and opportunities for structural DNA nanotechnology

Pinheiro, Andre V.; Han, Dongran; Shih, William M.; Yan, Hao

doi:10.1038/NNANO.2011.187

Title: Challenges and opportunities for structural DNA nanotechnology

Journal Article · Sun Nov 06 00:00:00 EDT 2011 · Nature Nanotechnology

DOI:https://doi.org/10.1038/NNANO.2011.187· OSTI ID:1381251

Pinheiro, Andre V.; Han, Dongran; Shih, William M.; Yan, Hao

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Research Organization:: Energy Frontier Research Centers (EFRC) (United States). Center for Bio-Inspired Solar Fuel Production (BISfuel)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES)

DOE Contract Number:: SC0001016

OSTI ID:: 1381251

Journal Information:: Nature Nanotechnology, Vol. 6, Issue 12; Related Information: BISfuel partners with Arizona State University.; ISSN 1748-3387

Publisher:: Nature Publishing Group

Country of Publication:: United States

Language:: English

References (123)

A Structurally Tunable DNA-Based Extracellular Matrix Aldaye, Faisal A.; Senapedis, William T.; Silver, Pamela A. Journal of the American Chemical Society, Vol. 132, Issue 42 https://doi.org/10.1021/ja105431h	journal	October 2010
A Self-Assembled DNA Bipyramid Erben, Christoph M.; Goodman, Russell P.; Turberfield, Andrew J. Journal of the American Chemical Society, Vol. 129, Issue 22 https://doi.org/10.1021/ja071493b	journal	May 2007
Cover Picture: The Nature of the Extraordinary Finish of Stradivari’s Instruments (Angew. Chem. Int. Ed. 1/2010) Echard, Jean-Philippe; Bertrand, Loïc; von Bohlen, Alex Angewandte Chemie International Edition, Vol. 49, Issue 1 https://doi.org/10.1002/anie.200906553	journal	December 2009
Programmed Two-Dimensional Self-Assembly of Multiple DNA Origami Jigsaw Pieces Rajendran, Arivazhagan; Endo, Masayuki; Katsuda, Yousuke ACS Nano, Vol. 5, Issue 1 https://doi.org/10.1021/nn1031627	journal	December 2010
Building plasmonic nanostructures with DNA Tan, Shawn J.; Campolongo, Michael J.; Luo, Dan Nature Nanotechnology, Vol. 6, Issue 5 https://doi.org/10.1038/nnano.2011.49	journal	April 2011
Folding DNA into Twisted and Curved Nanoscale Shapes Dietz, H.; Douglas, S. M.; Shih, W. M. Science, Vol. 325, Issue 5941 https://doi.org/10.1126/science.1174251	journal	August 2009
Reconfigurable, braced, three-dimensional DNA nanostructures Goodman, Russell P.; Heilemann, Mike; Doose, Sören Nature Nanotechnology, Vol. 3, Issue 2 https://doi.org/10.1038/nnano.2008.3	journal	February 2008
Design and self-assembly of two-dimensional DNA crystals Winfree, Erik; Liu, Furong; Wenzler, Lisa A. Nature, Vol. 394, Issue 6693 https://doi.org/10.1038/28998	journal	August 1998
Encapsulation of Gold Nanoparticles in a DNA Origami Cage Zhao, Zhao; Jacovetty, Erica L.; Liu, Yan Angewandte Chemie International Edition, Vol. 50, Issue 9 https://doi.org/10.1002/anie.201006818	journal	January 2011
DNA Scissors Device Used to Measure MutS Binding to DNA Mis-pairs Gu, Hongzhou; Yang, Wei; Seeman, Nadrian C. Journal of the American Chemical Society, Vol. 132, Issue 12 https://doi.org/10.1021/ja910188p	journal	March 2010
Synergistic self-assembly of RNA and DNA molecules Ko, Seung Hyeon; Su, Min; Zhang, Chuan Nature Chemistry, Vol. 2, Issue 12 https://doi.org/10.1038/nchem.890	journal	October 2010
An immobile nucleic acid junction constructed from oligonucleotides Kallenbach, Neville R.; Ma, Rong-Ine; Seeman, Nadrian C. Nature, Vol. 305, Issue 5937 https://doi.org/10.1038/305829a0	journal	October 1983
Self-assembly of a nanoscale DNA box with a controllable lid Andersen, Ebbe S.; Dong, Mingdong; Nielsen, Morten M. Nature, Vol. 459, Issue 7243 https://doi.org/10.1038/nature07971	journal	May 2009
Energy Conversion in Natural and Artificial Photosynthesis McConnell, Iain; Li, Gonghu; Brudvig, Gary W. Chemistry & Biology, Vol. 17, Issue 5 https://doi.org/10.1016/j.chembiol.2010.05.005	journal	May 2010
Synthesis of crystals with a programmable kinetic barrier to nucleation Schulman, R.; Winfree, E. Proceedings of the National Academy of Sciences, Vol. 104, Issue 39 https://doi.org/10.1073/pnas.0701467104	journal	September 2007
Directed nucleation assembly of DNA tile complexes for barcode-patterned lattices Yan, Hao; LaBean, Thomas H.; Feng, Liping Proceedings of the National Academy of Sciences, Vol. 100, Issue 14 https://doi.org/10.1073/pnas.1032954100	journal	June 2003
Aptamer-Directed Self-Assembly of Protein Arrays on a DNA Nanostructure Liu, Yan; Lin, Chenxiang; Li, Hanying Angewandte Chemie International Edition, Vol. 44, Issue 28 https://doi.org/10.1002/anie.200501089	journal	July 2005
Interconnecting Gold Islands with DNA Origami Nanotubes Ding, Baoquan; Wu, Hao; Xu, Wei Nano Letters, Vol. 10, Issue 12 https://doi.org/10.1021/nl1033073	journal	December 2010
Studies of Thermal Stability of Multivalent DNA Hybridization in a Nanostructured System Nangreave, Jeanette; Yan, Hao; Liu, Yan Biophysical Journal, Vol. 97, Issue 2 https://doi.org/10.1016/j.bpj.2009.05.013	journal	July 2009
Self-Assembly of Symmetric Finite-Size DNA Nanoarrays Liu, Yan; Ke, Yonggang; Yan, Hao Journal of the American Chemical Society, Vol. 127, Issue 49 https://doi.org/10.1021/ja055614o	journal	December 2005
DNA‐Tile‐Directed Self‐Assembly of Quantum Dots into Two‐Dimensional Nanopatterns Sharma, Jaswinder; Ke, Yonggang; Lin, Chenxiang Angewandte Chemie International Edition, Vol. 47, Issue 28 https://doi.org/10.1002/anie.200801485	journal	June 2008
Design of Molecular Photonic Wires Based on Multistep Electronic Excitation Transfer Tinnefeld, Philip; Heilemann, Mike; Sauer, Markus ChemPhysChem, Vol. 6, Issue 2 https://doi.org/10.1002/cphc.200400513	journal	February 2005
From molecular to macroscopic via the rational design of a self-assembled 3D DNA crystal Zheng, Jianping; Birktoft, Jens J.; Chen, Yi Nature, Vol. 461, Issue 7260 https://doi.org/10.1038/nature08274	journal	September 2009
Self-assembly of carbon nanotubes into two-dimensional geometries using DNA origami templates Maune, Hareem T.; Han, Si-ping; Barish, Robert D. Nature Nanotechnology, Vol. 5, Issue 1 https://doi.org/10.1038/nnano.2009.311	journal	November 2009
From The Cover: Triggered amplification by hybridization chain reaction Dirks, R. M.; Pierce, N. A. Proceedings of the National Academy of Sciences, Vol. 101, Issue 43 https://doi.org/10.1073/pnas.0407024101	journal	October 2004
A DNA-based method for rationally assembling nanoparticles into macroscopic materials Mirkin, Chad A.; Letsinger, Robert L.; Mucic, Robert C. Nature, Vol. 382, Issue 6592, p. 607-609 https://doi.org/10.1038/382607a0	journal	August 1996
Free-standing nanoparticle superlattice sheets controlled by DNA Cheng, Wenlong; Campolongo, Michael J.; Cha, Judy J. Nature Materials, Vol. 8, Issue 6 https://doi.org/10.1038/nmat2440	journal	May 2009
A DNA-fuelled molecular machine made of DNA Yurke, Bernard; Turberfield, Andrew J.; Mills, Allen P. Nature, Vol. 406, Issue 6796 https://doi.org/10.1038/35020524	journal	August 2000
A Two-Dimensional DNA Array: The Three-Layer Logpile Malo, Jonathan; Mitchell, James C.; Turberfield, Andrew J. Journal of the American Chemical Society, Vol. 131, Issue 38 https://doi.org/10.1021/ja9042593	journal	September 2009
Self-Assembly Strategies for Integrating Light Harvesting and Charge Separation in Artificial Photosynthetic Systems Wasielewski, Michael R. Accounts of Chemical Research, Vol. 42, Issue 12 https://doi.org/10.1021/ar9001735	journal	December 2009
Design and Characterization of Programmable DNA Nanotubes Rothemund, Paul W. K.; Ekani-Nkodo, Axel; Papadakis, Nick Journal of the American Chemical Society, Vol. 126, Issue 50 https://doi.org/10.1021/ja044319l	journal	December 2004
Finite-Size, Fully Addressable DNA Tile Lattices Formed by Hierarchical Assembly Procedures Park, Sung Ha; Pistol, Constantin; Ahn, Sang Jung Angewandte Chemie International Edition, Vol. 45, Issue 5 https://doi.org/10.1002/anie.200503797	journal	January 2006
Multilayer DNA Origami Packed on a Square Lattice Ke, Yonggang; Douglas, Shawn M.; Liu, Minghui Journal of the American Chemical Society, Vol. 131, Issue 43 https://doi.org/10.1021/ja906381y	journal	November 2009
A Study of DNA Tube Formation Mechanisms Using 4-, 8-, and 12-Helix DNA Nanostructures Ke, Yonggang; Liu, Yan; Zhang, Junping Journal of the American Chemical Society, Vol. 128, Issue 13 https://doi.org/10.1021/ja058145z	journal	April 2006
DNA Prism Structures Constructed by Folding of Multiple Rectangular Arms Endo, Masayuki; Hidaka, Kumi; Kato, Takayuki Journal of the American Chemical Society, Vol. 131, Issue 43 https://doi.org/10.1021/ja904252e	journal	November 2009
Stepwise surface encoding for high-throughput assembly of nanoclusters Maye, Mathew M.; Nykypanchuk, Dmytro; Cuisinier, Marine Nature Materials, Vol. 8, Issue 5 https://doi.org/10.1038/nmat2421	journal	March 2009
DNA-based programming of quantum dot valency, self-assembly and luminescence Tikhomirov, Grigory; Hoogland, Sjoerd; Lee, P. E. Nature Nanotechnology, Vol. 6, Issue 8 https://doi.org/10.1038/nnano.2011.100	journal	July 2011
Recent advances in DNA-based directed assembly on surfaces Hung, Albert M.; Noh, Hyunwoo; Cha, Jennifer N. Nanoscale, Vol. 2, Issue 12 https://doi.org/10.1039/c0nr00430h	journal	January 2010
Programmable DNA Self-Assemblies for Nanoscale Organization of Ligands and Proteins Park, Sung Ha; Yin, Peng; Liu, Yan Nano Letters, Vol. 5, Issue 4 https://doi.org/10.1021/nl050175c	journal	April 2005
Rapid Chiral Assembly of Rigid DNA Building Blocks for Molecular Nanofabrication Goodman, R. P. Science, Vol. 310, Issue 5754 https://doi.org/10.1126/science.1120367	journal	December 2005
Self-Assembly of Hexagonal DNA Two-Dimensional (2D) Arrays He, Yu; Chen, Yi; Liu, Haipeng Journal of the American Chemical Society, Vol. 127, Issue 35 https://doi.org/10.1021/ja0541938	journal	September 2005
Surface-Mediated DNA Self-Assembly Sun, Xuping; Hyeon Ko, Seung; Zhang, Chuan Journal of the American Chemical Society, Vol. 131, Issue 37 https://doi.org/10.1021/ja906475w	journal	August 2009
Bioorthogonal Chemistry for Site-Specific Labeling and Surface Immobilization of Proteins Chen, Yong-Xiang; Triola, Gemma; Waldmann, Herbert Accounts of Chemical Research, Vol. 44, Issue 9 https://doi.org/10.1021/ar200046h	journal	September 2011
DNA origami: a history and current perspective Nangreave, Jeanette; Han, Dongran; Liu, Yan Current Opinion in Chemical Biology, Vol. 14, Issue 5 https://doi.org/10.1016/j.cbpa.2010.06.182	journal	October 2010
DNA Origami with Complex Curvatures in Three-Dimensional Space Han, D.; Pal, S.; Nangreave, J. Science, Vol. 332, Issue 6027 https://doi.org/10.1126/science.1202998	journal	April 2011
Algorithmic Self-Assembly of DNA Sierpinski Triangles Rothemund, Paul W. K.; Papadakis, Nick; Winfree, Erik PLoS Biology, Vol. 2, Issue 12 https://doi.org/10.1371/journal.pbio.0020424	journal	December 2004
Highly Connected Two-Dimensional Crystals of DNA Six-Point-Stars He, Yu; Tian, Ye; Ribbe, Alexander E. Journal of the American Chemical Society, Vol. 128, Issue 50 https://doi.org/10.1021/ja0665141	journal	December 2006
A 1.7-kilobase single-stranded DNA that folds into a nanoscale octahedron Shih, William M.; Quispe, Joel D.; Joyce, Gerald F. Nature, Vol. 427, Issue 6975 https://doi.org/10.1038/nature02307	journal	February 2004
Programmable molecular recognition based on the geometry of DNA nanostructures Woo, Sungwook; Rothemund, Paul W. K. Nature Chemistry, Vol. 3, Issue 8 https://doi.org/10.1038/nchem.1070	journal	July 2011
Molecular Behavior of DNA Origami in Higher-Order Self-Assembly Li, Zhe; Liu, Minghui; Wang, Lei Journal of the American Chemical Society, Vol. 132, Issue 38 https://doi.org/10.1021/ja106292x	journal	September 2010
Self-Assembling a Molecular Pegboard Lund, Kyle; Liu, Yan; Lindsay, Stuart Journal of the American Chemical Society, Vol. 127, Issue 50 https://doi.org/10.1021/ja0568446	journal	December 2005
Nucleic acid junctions and lattices Seeman, Nadrian C. Journal of Theoretical Biology, Vol. 99, Issue 2 https://doi.org/10.1016/0022-5193(82)90002-9	journal	November 1982
Construction, Analysis, Ligation, and Self-Assembly of DNA Triple Crossover Complexes LaBean, Thomas H.; Yan, Hao; Kopatsch, Jens Journal of the American Chemical Society, Vol. 122, Issue 9 https://doi.org/10.1021/ja993393e	journal	March 2000
Large-area spatially ordered arrays of gold nanoparticles directed by lithographically confined DNA origami Hung, Albert M.; Micheel, Christine M.; Bozano, Luisa D. Nature Nanotechnology, Vol. 5, Issue 2 https://doi.org/10.1038/nnano.2009.450	journal	December 2009
An autonomous polymerization motor powered by DNA hybridization Venkataraman, Suvir; Dirks, Robert M.; Rothemund, Paul W. K. Nature Nanotechnology, Vol. 2, Issue 8 https://doi.org/10.1038/nnano.2007.225	journal	July 2007
A primer to scaffolded DNA origami Castro, Carlos Ernesto; Kilchherr, Fabian; Kim, Do-Nyun Nature Methods, Vol. 8, Issue 3 https://doi.org/10.1038/nmeth.1570	journal	February 2011
High-Throughput, Real-Time Monitoring of the Self-Assembly of DNA Nanostructures by FRET Spectroscopy Saccà, Barbara; Meyer, Rebecca; Feldkamp, Udo Angewandte Chemie International Edition, Vol. 47, Issue 11 https://doi.org/10.1002/anie.200704836	journal	February 2008
DNA-Directed Assembly of Bienzymic Complexes from In Vivo Biotinylated NAD(P)H:FMN Oxidoreductase and Luciferase Niemeyer, Christof M.; Koehler, Joerg; Wuerdemann, Chris ChemBioChem, Vol. 3, Issue 2-3 https://doi.org/10.1002/1439-7633(20020301)3:2/3<242::AID-CBIC242>3.0.CO;2-F	journal	March 2002
In vivo cloning of artificial DNA nanostructures Lin, C.; Rinker, S.; Wang, X. Proceedings of the National Academy of Sciences, Vol. 105, Issue 46 https://doi.org/10.1073/pnas.0805416105	journal	October 2008
Orthogonal Protein Decoration of DNA Origami Saccà, Barbara; Meyer, Rebecca; Erkelenz, Michael Angewandte Chemie International Edition, Vol. 49, Issue 49 https://doi.org/10.1002/anie.201005931	journal	October 2010
Self-assembly of DNA into nanoscale three-dimensional shapes Douglas, Shawn M.; Dietz, Hendrik; Liedl, Tim Nature, Vol. 459, Issue 7245 https://doi.org/10.1038/nature08016	journal	May 2009
DNA-Templated Protein Arrays for Single-Molecule Imaging Selmi, Daniele N.; Adamson, Roslin J.; Attrill, Helen Nano Letters, Vol. 11, Issue 2 https://doi.org/10.1021/nl1037769	journal	February 2011
Programming DNA Tube Circumferences Yin, P.; Hariadi, R. F.; Sahu, S. Science, Vol. 321, Issue 5890 https://doi.org/10.1126/science.1157312	journal	August 2008
Six-Helix Bundles Designed from DNA Mathieu, Frederick; Liao, Shiping; Kopatsch, Jens Nano Letters, Vol. 5, Issue 4 https://doi.org/10.1021/nl050084f	journal	April 2005
DNA-Templated Self-Assembly of Metallic Nanocomponent Arrays on a Surface Le, John D.; Pinto, Yariv; Seeman, Nadrian C. Nano Letters, Vol. 4, Issue 12 https://doi.org/10.1021/nl048635+	journal	October 2004
Approaching The Limit: Can One DNA Oligonucleotide Assemble into Large Nanostructures? Liu, Haipeng; Chen, Yi; He, Yu Angewandte Chemie International Edition, Vol. 45, Issue 12 https://doi.org/10.1002/anie.200504022	journal	March 2006
Sequential Self-Assembly of a DNA Hexagon as a Template for the Organization of Gold Nanoparticles Aldaye, Faisal A.; Sleiman, Hanadi F. Angewandte Chemie International Edition, Vol. 45, Issue 14 https://doi.org/10.1002/anie.200502481	journal	March 2006
Mitochondrial uncoupling protein 2 structure determined by NMR molecular fragment searching Berardi, Marcelo J.; Shih, William M.; Harrison, Stephen C. Nature, Vol. 476, Issue 7358 https://doi.org/10.1038/nature10257	journal	July 2011
DNA double-crossover molecules Fu, Tsu Ju; Seeman, Nadrian C. Biochemistry, Vol. 32, Issue 13 https://doi.org/10.1021/bi00064a003	journal	April 1993
Metal–nucleic acid cages Yang, Hua; McLaughlin, Christopher K.; Aldaye, Faisal A. Nature Chemistry, Vol. 1, Issue 5 https://doi.org/10.1038/nchem.290	journal	July 2009
Enzyme cascades activated on topologically programmed DNA scaffolds Wilner, Ofer I.; Weizmann, Yossi; Gill, Ron Nature Nanotechnology, Vol. 4, Issue 4 https://doi.org/10.1038/nnano.2009.50	journal	March 2009
Loading and selective release of cargo in DNA nanotubes with longitudinal variation Lo, Pik Kwan; Karam, Pierre; Aldaye, Faisal A. Nature Chemistry, Vol. 2, Issue 4 https://doi.org/10.1038/nchem.575	journal	March 2010
Self-assembling DNA templates for programmed artificial biomineralization Samano, Enrique C.; Pilo-Pais, Mauricio; Goldberg, Sarah Soft Matter, Vol. 7, Issue 7 https://doi.org/10.1039/c0sm01318h	journal	January 2011
Placement and orientation of individual DNA shapes on lithographically patterned surfaces Kershner, Ryan J.; Bozano, Luisa D.; Micheel, Christine M. Nature Nanotechnology, Vol. 4, Issue 9 https://doi.org/10.1038/nnano.2009.220	journal	August 2009
Metallization of Branched DNA Origami for Nanoelectronic Circuit Fabrication Liu, Jianfei; Geng, Yanli; Pound, Elisabeth ACS Nano, Vol. 5, Issue 3 https://doi.org/10.1021/nn1035075	journal	February 2011
Two-Dimensional Nanoparticle Arrays Show the Organizational Power of Robust DNA Motifs Zheng, Jiwen; Constantinou, Pamela E.; Micheel, Christine Nano Letters, Vol. 6, Issue 7 https://doi.org/10.1021/nl060994c	journal	July 2006
DNA-guided crystallization of colloidal nanoparticles Nykypanchuk, Dmytro; Maye, Mathew M.; van der Lelie, Daniel Nature, Vol. 451, Issue 7178, p. 549-552 https://doi.org/10.1038/nature06560	journal	January 2008
DNA-Templated Self-Assembly of Two-Dimensional and Periodical Gold Nanoparticle Arrays Sharma, Jaswinder; Chhabra, Rahul; Liu, Yan Angewandte Chemie International Edition, Vol. 45, Issue 5 https://doi.org/10.1002/anie.200503208	journal	January 2006
Site‐Specific Assembly of DNA‐Based Photonic Wires by Using Programmable Polyamides Su, Wu; Schuster, Markus; Bagshaw, Clive R. Angewandte Chemie International Edition, Vol. 50, Issue 12 https://doi.org/10.1002/anie.201006735	journal	March 2011
Construction of a DNA-Truncated Octahedron Zhang, Yuwen; Seeman, Nadrian C. Journal of the American Chemical Society, Vol. 116, Issue 5 https://doi.org/10.1021/ja00084a006	journal	March 1994
Periodic Square-Like Gold Nanoparticle Arrays Templated by Self-Assembled 2D DNA Nanogrids on a Surface Zhang, Junping; Liu, Yan; Ke, Yonggang Nano Letters, Vol. 6, Issue 2 https://doi.org/10.1021/nl052210l	journal	February 2006
Antiparallel DNA Double Crossover Molecules As Components for Nanoconstruction Li, Xiaojun; Yang, Xiaoping; Qi, Jing Journal of the American Chemical Society, Vol. 118, Issue 26 https://doi.org/10.1021/ja960162o	journal	January 1996
Programmable Periodicity of Quantum Dot Arrays with DNA Origami Nanotubes Bui, Hieu; Onodera, Craig; Kidwell, Carson Nano Letters, Vol. 10, Issue 9 https://doi.org/10.1021/nl101079u	journal	September 2010
Tensegrity: Construction of Rigid DNA Triangles with Flexible Four-Arm DNA Junctions Liu, Dage; Wang, Mingsheng; Deng, Zhaoxiang Journal of the American Chemical Society, Vol. 126, Issue 8 https://doi.org/10.1021/ja031754r	journal	March 2004
A molecular ruler based on plasmon coupling of single gold and silver nanoparticles Sönnichsen, Carsten; Reinhard, Björn M.; Liphardt, Jan Nature Biotechnology, Vol. 23, Issue 6 https://doi.org/10.1038/nbt1100	journal	May 2005
Organization of 'nanocrystal molecules' using DNA Alivisatos, A. Paul; Johnsson, Kai P.; Peng, Xiaogang Nature, Vol. 382, Issue 6592 https://doi.org/10.1038/382609a0	journal	August 1996
DNA origami: Fold, stick, and beyond Kuzuya, Akinori; Komiyama, Makoto Nanoscale, Vol. 2, Issue 3 https://doi.org/10.1039/B9NR00246D	journal	January 2010
A Route to Scale Up DNA Origami Using DNA Tiles as Folding Staples Zhao, Zhao; Yan, Hao; Liu, Yan Angewandte Chemie International Edition, Vol. 49, Issue 8 https://doi.org/10.1002/anie.200906225	journal	January 2010
DNA-Templated Self-Assembly of Protein Arrays and Highly Conductive Nanowires Yan, H. Science, Vol. 301, Issue 5641 https://doi.org/10.1126/science.1089389	journal	September 2003
Visualization of Dynamic Conformational Switching of the G-Quadruplex in a DNA Nanostructure Sannohe, Yuta; Endo, Masayuki; Katsuda, Yousuke Journal of the American Chemical Society, Vol. 132, Issue 46 https://doi.org/10.1021/ja1058907	journal	November 2010
Shaping up nucleic acid computation Chen, Xi; Ellington, Andrew D. Current Opinion in Biotechnology, Vol. 21, Issue 4 https://doi.org/10.1016/j.copbio.2010.05.003	journal	August 2010
Scalable gene synthesis by selective amplification of DNA pools from high-fidelity microchips Kosuri, Sriram; Eroshenko, Nikolai; LeProust, Emily M. Nature Biotechnology, Vol. 28, Issue 12, p. 1295-1299 https://doi.org/10.1038/nbt.1716	journal	November 2010
Crystalline Two-Dimensional DNA-Origami Arrays Liu, Wenyan; Zhong, Hong; Wang, Risheng Angewandte Chemie International Edition, Vol. 50, Issue 1 https://doi.org/10.1002/anie.201005911	journal	November 2010
Programming biomolecular self-assembly pathways Yin, Peng; Choi, Harry M. T.; Calvert, Colby R. Nature, Vol. 451, Issue 7176 https://doi.org/10.1038/nature06451	journal	January 2008
Synthesis from DNA of a molecule with the connectivity of a cube Chen, Junghuei; Seeman, Nadrian C. Nature, Vol. 350, Issue 6319 https://doi.org/10.1038/350631a0	journal	April 1991
A nanomechanical device based on the B–Z transition of DNA Mao, Chengde; Sun, Weiqiong; Shen, Zhiyong Nature, Vol. 397, Issue 6715 https://doi.org/10.1038/16437	journal	January 1999
Regulation of DNA Methylation Using Different Tensions of Double Strands Constructed in a Defined DNA Nanostructure Endo, Masayuki; Katsuda, Yousuke; Hidaka, Kumi Journal of the American Chemical Society, Vol. 132, Issue 5 https://doi.org/10.1021/ja907649w	journal	January 2010
A system for the continuous directed evolution of biomolecules Esvelt, Kevin M.; Carlson, Jacob C.; Liu, David R. Nature, Vol. 472, Issue 7344 https://doi.org/10.1038/nature09929	journal	April 2011
Stability of DNA Origami Nanoarrays in Cell Lysate Mei, Qian; Wei, Xixi; Su, Fengyu Nano Letters, Vol. 11, Issue 4 https://doi.org/10.1021/nl1040836	journal	April 2011
Control of Self-Assembly of DNA Tubules Through Integration of Gold Nanoparticles Sharma, J.; Chhabra, R.; Cheng, A. Science, Vol. 323, Issue 5910 https://doi.org/10.1126/science.1165831	journal	January 2009
Advancing high-throughput gene synthesis technology Tian, Jingdong; Ma, Kuosheng; Saaem, Ishtiaq Molecular BioSystems, Vol. 5, Issue 7 https://doi.org/10.1039/b822268c	journal	January 2009
Supramolecular fullerene chemistry Diederich, François; Gómez-López, Marcos Chemical Society Reviews, Vol. 28, Issue 5 https://doi.org/10.1039/a804248i	journal	January 1999
Modular construction of DNA nanotubes of tunable geometry and single- or double-stranded character Aldaye, Faisal A.; Lo, Pik Kwan; Karam, Pierre Nature Nanotechnology, Vol. 4, Issue 6 https://doi.org/10.1038/nnano.2009.72	journal	April 2009
Immobilization and One-Dimensional Arrangement of Virus Capsids with Nanoscale Precision Using DNA Origami Stephanopoulos, Nicholas; Liu, Minghui; Tong, Gary J. Nano Letters, Vol. 10, Issue 7 https://doi.org/10.1021/nl1018468	journal	July 2010
Long-Distance Charge Transport in DNA: The Hopping Mechanism Giese, Bernd Accounts of Chemical Research, Vol. 33, Issue 9 https://doi.org/10.1021/ar990040b	journal	September 2000
Single-Molecule Four-Color FRET Visualizes Energy-Transfer Paths on DNA Origami Stein, Ingo H.; Steinhauer, Christian; Tinnefeld, Philip Journal of the American Chemical Society, Vol. 133, Issue 12 https://doi.org/10.1021/ja1105464	journal	March 2011
Dynamic DNA nanotechnology using strand-displacement reactions Zhang, David Yu; Seelig, Georg Nature Chemistry, Vol. 3, Issue 2 https://doi.org/10.1038/nchem.957	journal	January 2011
Assembling Materials with DNA as the Guide Aldaye, F. A.; Palmer, A. L.; Sleiman, H. F. Science, Vol. 321, Issue 5897 https://doi.org/10.1126/science.1154533	journal	September 2008
Knitting complex weaves with DNA origami Shih, William M.; Lin, Chenxiang Current Opinion in Structural Biology, Vol. 20, Issue 3 https://doi.org/10.1016/j.sbi.2010.03.009	journal	June 2010
Spatially Addressable Multiprotein Nanoarrays Templated by Aptamer-Tagged DNA Nanoarchitectures Chhabra, Rahul; Sharma, Jaswinder; Ke, Yonggang Journal of the American Chemical Society, Vol. 129, Issue 34 https://doi.org/10.1021/ja072410u	journal	August 2007
Self-assembly of three-dimensional prestressed tensegrity structures from DNA Liedl, Tim; Högberg, Björn; Tytell, Jessica Nature Nanotechnology, Vol. 5, Issue 7 https://doi.org/10.1038/nnano.2010.107	journal	June 2010
Nanowire photonics Yan, Ruoxue; Gargas, Daniel; Yang, Peidong Nature Photonics, Vol. 3, Issue 10 https://doi.org/10.1038/nphoton.2009.184	journal	October 2009
Nanomaterials Based on DNA Seeman, Nadrian C. Annual Review of Biochemistry, Vol. 79, Issue 1 https://doi.org/10.1146/annurev-biochem-060308-102244	journal	June 2010
Folding and cutting DNA into reconfigurable topological nanostructures Han, Dongran; Pal, Suchetan; Liu, Yan Nature Nanotechnology, Vol. 5, Issue 10 https://doi.org/10.1038/nnano.2010.193	journal	October 2010
Modular Access to Structurally Switchable 3D Discrete DNA Assemblies Aldaye, Faisal A.; Sleiman, Hanadi F. Journal of the American Chemical Society, Vol. 129, Issue 44 https://doi.org/10.1021/ja075966q	journal	November 2007
Gold Nanoparticle Self-Similar Chain Structure Organized by DNA Origami Ding, Baoquan; Deng, Zhengtao; Yan, Hao Journal of the American Chemical Society, Vol. 132, Issue 10 https://doi.org/10.1021/ja9101198	journal	March 2010
DNA nanotubes self-assembled from triple-crossover tiles as templates for conductive nanowires Liu, D.; Park, S. H.; Reif, J. H. Proceedings of the National Academy of Sciences, Vol. 101, Issue 3 https://doi.org/10.1073/pnas.0305860101	journal	January 2004
A proximity-based programmable DNA nanoscale assembly line Gu, Hongzhou; Chao, Jie; Xiao, Shou-Jun Nature, Vol. 465, Issue 7295 https://doi.org/10.1038/nature09026	journal	May 2010
DNA-nanotube-induced alignment of membrane proteins for NMR structure determination Douglas, S. M.; Chou, J. J.; Shih, W. M. Proceedings of the National Academy of Sciences, Vol. 104, Issue 16 https://doi.org/10.1073/pnas.0700930104	journal	April 2007
Photochemical Conversion of Solar Energy Balzani, Vincenzo; Credi, Alberto; Venturi, Margherita ChemSusChem, Vol. 1, Issue 1-2 https://doi.org/10.1002/cssc.200700087	journal	February 2008
Self-Assembly of Chiral DNA Nanotubes Mitchell, James C.; Harris, J. Robin; Malo, Jonathan Journal of the American Chemical Society, Vol. 126, Issue 50 https://doi.org/10.1021/ja043890h	journal	December 2004
The emerging field of RNA nanotechnology Guo, Peixuan Nature Nanotechnology, Vol. 5, Issue 12 https://doi.org/10.1038/nnano.2010.231	journal	November 2010
Scaffolded DNA Origami of a DNA Tetrahedron Molecular Container Ke, Yonggang; Sharma, Jaswinder; Liu, Minghui Nano Letters, Vol. 9, Issue 6 https://doi.org/10.1021/nl901165f	journal	June 2009

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