Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes

Melton, Emily Denise; Sorokin, Dimitry Y.; Overmars, Lex; Chertkov, Olga; Clum, Alicia; Pillay, Manoj; Ivanova, Natalia; Shapiro, Nicole; Kyrpides, Nikos C.; Woyke, Tanja; Lapidus, Alla L.; Muyzer, Gerard

doi:10.1186/s40793-016-0184-4

Title: Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2^T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes

Journal Article · Thu Sep 08 00:00:00 EDT 2016 · Standards in Genomic Sciences

DOI:https://doi.org/10.1186/s40793-016-0184-4· OSTI ID:1375179

Melton, Emily Denise ^[1]; Sorokin, Dimitry Y. ^[2]; Overmars, Lex ^[1]; Chertkov, Olga ^[3]; Clum, Alicia ^[4]; Pillay, Manoj ^[5]; Ivanova, Natalia ^[4]; Shapiro, Nicole ^[4]; Kyrpides, Nikos C. ^[6]; Woyke, Tanja ^[4]; Lapidus, Alla L. ^[7];

^[1]

Univ. of Amsterdam, Amsterdam (The Netherlands)
Research Centre of Biotechnology, Moscow (Russia); Delft Univ. of Technology, Delft (The Netherlands)
Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States); King Abdulaziz Univ., Jeddah (Saudi Arabia)
St. Petersburg State Univ., St. Petersburg (Russia)

Desulfurivibrio alkaliphilus strain AHT2^T is a strictly anaerobic sulfidogenic haloalkaliphile isolated from a composite sediment sample of eight hypersaline alkaline lakes in the Wadi al Natrun valley in the Egyptian Libyan Desert. D. alkaliphilus AHT2^T is Gram-negative and belongs to the family Desulfobulbaceae within the Deltaproteobacteria. Here we report its genome sequence, which contains a 3.10 Mbp chromosome. Here, D. alkaliphilus AHT2^T is adapted to survive under highly alkaline and moderately saline conditions and therefore, is relevant to the biotechnology industry and life under extreme conditions. For these reasons, D. alkaliphilus AHT2^T was sequenced by the DOE Joint Genome Institute as part of the Community Science Program.

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Research Organization:: Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER)

Grant/Contract Number:: AC52-06NA25396; AC02-05CH11231

OSTI ID:: 1375179

Alternate ID(s):: OSTI ID: 1377480

Report Number(s):: LA-UR-17-24950

Journal Information:: Standards in Genomic Sciences, Vol. 11, Issue 1; ISSN 1944-3277

Publisher:: BioMed CentralCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 23 works

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Title: Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes

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Title: Complete genome sequence of Desulfurivibrio alkaliphilus strain AHT2^T, a haloalkaliphilic sulfidogen from Egyptian hypersaline alkaline lakes