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Title: Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii

Authors:
; ; ; ; ; ; ; ;
Publication Date:
Research Org.:
Energy Frontier Research Centers (EFRC) (United States). Center for Advanced Biofuel Systems (CABS)
Sponsoring Org.:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
OSTI Identifier:
1369671
DOE Contract Number:  
SC0001295
Resource Type:
Journal Article
Journal Name:
Journal of Experimental Botany
Additional Journal Information:
Journal Volume: 66; Journal Issue: 15; Related Information: CABS partners with the Donald Danforth Plant Science Center (lead); Michigan State University; New Mexico Consortium; University of Nebraska; University of Missouri – St. Louis; Washington State University; Journal ID: ISSN 0022-0957
Publisher:
Oxford University Press
Country of Publication:
United States
Language:
English

Citation Formats

Gargouri, Mahmoud, Park, Jeong-Jin, Holguin, F. Omar, Kim, Min-Jeong, Wang, Hongxia, Deshpande, Rahul R., Shachar-Hill, Yair, Hicks, Leslie M., and Gang, David R. Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii. United States: N. p., 2015. Web. doi:10.1093/jxb/erv217.
Gargouri, Mahmoud, Park, Jeong-Jin, Holguin, F. Omar, Kim, Min-Jeong, Wang, Hongxia, Deshpande, Rahul R., Shachar-Hill, Yair, Hicks, Leslie M., & Gang, David R. Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii. United States. https://doi.org/10.1093/jxb/erv217
Gargouri, Mahmoud, Park, Jeong-Jin, Holguin, F. Omar, Kim, Min-Jeong, Wang, Hongxia, Deshpande, Rahul R., Shachar-Hill, Yair, Hicks, Leslie M., and Gang, David R. 2015. "Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii". United States. https://doi.org/10.1093/jxb/erv217.
@article{osti_1369671,
title = {Identification of regulatory network hubs that control lipid metabolism in Chlamydomonas reinhardtii},
author = {Gargouri, Mahmoud and Park, Jeong-Jin and Holguin, F. Omar and Kim, Min-Jeong and Wang, Hongxia and Deshpande, Rahul R. and Shachar-Hill, Yair and Hicks, Leslie M. and Gang, David R.},
abstractNote = {},
doi = {10.1093/jxb/erv217},
url = {https://www.osti.gov/biblio/1369671}, journal = {Journal of Experimental Botany},
issn = {0022-0957},
number = 15,
volume = 66,
place = {United States},
year = {Thu May 28 00:00:00 EDT 2015},
month = {Thu May 28 00:00:00 EDT 2015}
}

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The Regulation of Photosynthetic Structure and Function during Nitrogen Deprivation in Chlamydomonas reinhardtii
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Structure and functions of the GNAT superfamily of acetyltransferases
journal, January 2005


Progress in plant metabolic engineering
journal, April 2004


Differential Regulation of the Chlamydomonas Nar1 Gene Family by Carbon and Nitrogen
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The PHD finger, a nuclear protein-interaction domain
journal, January 2006


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ABA-Dependent and -Independent G-Protein Signaling in Arabidopsis Roots Revealed through an iTRAQ Proteomics Approach
journal, July 2011


Error and attack tolerance of complex networks
journal, July 2000


An ancient light-harvesting protein is critical for the regulation of algal photosynthesis
journal, November 2009


Exploiting diversity and synthetic biology for the production of algal biofuels
journal, August 2012


Improvement of water use efficiency in rice by expression of HARDY, an Arabidopsis drought and salt tolerance gene
journal, September 2007


Metabolic engineering of lipid catabolism increases microalgal lipid accumulation without compromising growth
journal, November 2013


Evidence for cross-pathway regulation of metabolic gene expression in plants.
journal, May 1995


Amino Acid and Adenine Cross-pathway Regulation Act through the Same 5′-TGACTC-3′ Motif in the Yeast HIS7 Promoter
journal, November 1996


Measuring Skewness: A Forgotten Statistic?
journal, July 2011


Metabolic Pathway Relationships Revealed by an Integrative Analysis of the Transcriptional and Metabolic Temperature Stress-Response Dynamics in Yeast
journal, June 2010


Molybdoenzymes and molybdenum cofactor in plants
journal, August 2002


Integrative gene-metabolite network with implemented causality deciphers informational fluxes of sulphur stress response
journal, May 2005


The Evolutionary Origin of an Altruistic Gene
journal, May 2006


Phytozome: a comparative platform for green plant genomics
journal, November 2011


Oil accumulation is controlled by carbon precursor supply for fatty acid synthesis in Chlamydomonas reinhardtii
journal, May 2012


Overlapping Photoprotective Function of Vitamin E and Carotenoids in Chlamydomonas
journal, November 2011


The Regulation of Photosynthetic Structure and Function during Nitrogen Deprivation in Chlamydomonas reinhardtii
journal, December 2014


Nitrate Signaling by the Regulatory Gene NIT2 in Chlamydomonas
journal, November 2007


Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism
journal, April 2014


The response of Chlamydomonas reinhardtii to nitrogen deprivation: a systems biology analysis
journal, February 2015


High quality metabolomic data for Chlamydomonas reinhardtii
journal, January 2008


The Role of bZIP Transcription Factors in Green Plant Evolution: Adaptive Features Emerging from Four Founder Genes
journal, August 2008


Works referencing / citing this record:

Lipid production in Nannochloropsis gaditana is doubled by decreasing expression of a single transcriptional regulator
journal, June 2017


Control of seminal fluid protein expression via regulatory hubs in Drosophila melanogaster
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Intrinsic limitations in mainstream methods of identifying network motifs in biology
posted_content, February 2018


Metabolic regulation of triacylglycerol accumulation in the green algae: identification of potential targets for engineering to improve oil yield
journal, January 2016


Unraveling lipid metabolism in maize with time‐resolved multi‐omics data
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Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii
journal, December 2015


Increased lipid production by heterologous expression of AtWRI1 transcription factor in Nannochloropsis salina
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Recent developments in synthetic biology and metabolic engineering in microalgae towards biofuel production
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Microalgae for the production of lipid and carotenoids: a review with focus on stress regulation and adaptation
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Nitrogen-dependent coordination of cell cycle, quiescence and TAG accumulation in Chlamydomonas
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Intrinsic limitations in mainstream methods of identifying network motifs in biology
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Transcriptional program for nitrogen starvation-induced lipid accumulation in Chlamydomonas reinhardtii
journal, December 2015


Recent developments in synthetic biology and metabolic engineering in microalgae towards biofuel production
journal, June 2018


Microalgae for the production of lipid and carotenoids: a review with focus on stress regulation and adaptation
journal, October 2018


Understanding nitrate assimilation and its regulation in microalgae
journal, October 2015


iTRAQ-Based Proteomic Analysis Reveals Several Strategies to Cope with Drought Stress in Maize Seedlings
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