skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Human and Murine IFIT1 Proteins Do Not Restrict Infection of Negative-Sense RNA Viruses of the Orthomyxoviridae, Bunyaviridae, and Filoviridae Families

Journal Article · · Journal of Virology
DOI:https://doi.org/10.1128/JVI.00996-15· OSTI ID:1351392
 [1];  [1];  [1];  [1];  [2];  [1];  [3];  [1];  [4];  [3];  [1];  [1];  [1]
  1. Washington Univ. School of Medicine, St. Louis, MO (United States)
  2. Washington Univ. School of Medicine, St. Louis, MO (United States); Univ. of Campinas (UNICAMP), SP (Brazil)
  3. Boston Univ. School of Medicine, MA (United States)
  4. Rocky Mountain Labs, Hamilton, MT (United States)

Interferon-induced protein with tetratricopeptide repeats 1 (IFIT1) is a host protein with reported cell-intrinsic antiviral activity against several RNA viruses. The proposed basis for the activity against negative-sense RNA viruses is the binding to exposed 5'-triphosphates (5'-ppp) on the genome of viral RNA. However, recent studies reported relatively low binding affinities of IFIT1 for 5;-ppp RNA, suggesting that IFIT1 may not interact efficiently with this moiety under physiological conditions. To evaluate the ability of IFIT1 to have an impact on negative-sense RNA viruses, we infected Ifit1–/– and wild-type control mice and primary cells with four negative-sense RNA viruses (influenza A virus [IAV], La Crosse virus [LACV], Oropouche virus [OROV], and Ebola virus) corresponding to three distinct families. Unexpectedly, a lack of Ifit1 gene expression did not result in increased infection by any of these viruses in cell culture. Analogously, morbidity, mortality, and viral burdens in tissues were identical between Ifit1–/– and control mice after infection with IAV, LACV, or OROV. Finally, deletion of the human IFIT1 protein in A549 cells did not affect IAV replication or infection, and reciprocally, ectopic expression of IFIT1 in HEK293T cells did not inhibit IAV infection. To explain the lack of antiviral activity against IAV, we measured the binding affinity of IFIT1 for RNA oligonucleotides resembling the 5' ends of IAV gene segments. The affinity for 5'-ppp RNA was approximately 10-fold lower than that for non-2'-O-methylated (cap 0) RNA oligonucleotides. Based on this analysis, we conclude that IFIT1 is not a dominant restriction factor against negative-sense RNA viruses. Negative-sense RNA viruses, including influenza virus and Ebola virus, have been responsible for some of the most deadly outbreaks in recent history. The host interferon response and induction of antiviral genes contribute to the control of infections by these viruses. IFIT1 is highly induced after virus infection and reportedly has antiviral activity against several RNA and DNA viruses. However, its role in restricting infection by negative-sense RNA viruses remains unclear. In this paper, we evaluated the ability of IFIT1 to inhibit negative-sense RNA virus replication and pathogenesis both in vitro and in vivo. Detailed cell culture and animal studies demonstrated that IFIT1 is not a dominant restriction factor against three different families of negative-sense RNA viruses.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Organization:
National Institutes of Health (NIH); NIAID
Grant/Contract Number:
U54 AI057160; R01 AI104972; R01 AI104002; GM: 007067; F32 AI112274
OSTI ID:
1351392
Journal Information:
Journal of Virology, Vol. 89, Issue 18; ISSN 0022-538X
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
ENGLISH
Citation Metrics:
Cited by: 29 works
Citation information provided by
Web of Science

References (42)

The IFITM Proteins Mediate Cellular Resistance to Influenza A H1N1 Virus, West Nile Virus, and Dengue Virus journal December 2009
Development of a humanized monoclonal antibody with therapeutic potential against West Nile virus journal April 2005
Unconventional Mechanism of mRNA Capping by the RNA-Dependent RNA Polymerase of Vesicular Stomatitis Virus journal January 2007
IFIT1 is an antiviral protein that recognizes 5′-triphosphate RNA journal June 2011
A new pathway of translational regulation mediated by eukaryotic initiation factor 3 journal December 2000
2′-O Methylation of the Viral mRNA Cap by West Nile Virus Evades Ifit1-Dependent and -Independent Mechanisms of Host Restriction In Vivo journal May 2012
Sequestration by IFIT1 Impairs Translation of 2′O-unmethylated Capped RNA journal October 2013
Structural basis for viral 5′-PPP-RNA recognition by human IFIT proteins journal January 2013
The ISG56/IFIT1 Gene Family journal January 2011
Interferon-Induced Ifit Proteins: Their Role in Viral Pathogenesis journal November 2014
Growth and differentiation of mouse tracheal epithelial cells: selection of a proliferative population journal December 2002
PKR and RNase L Contribute to Protection against Lethal West Nile Virus Infection by Controlling Early Viral Spread in the Periphery and Replication in Neurons journal June 2006
Oropouche Virus Infection and Pathogenesis Are Restricted by MAVS, IRF-3, IRF-7, and Type I Interferon Signaling Pathways in Nonmyeloid Cells journal February 2015
Localization of RNA polymerases on influenza viral ribonucleoproteins by immunogold labeling journal June 1988
Inhibition of translation by IFIT family members is determined by their ability to interact selectively with the 5′-terminal regions of cap0-, cap1- and 5′ppp- mRNAs journal December 2013
The Inhibitory Action of P56 on Select Functions of E1 Mediates Interferon's Effect on Human Papillomavirus DNA Replication journal October 2010
Structure and Function of Flavivirus NS5 Methyltransferase journal January 2007
A Viral RNA Structural Element Alters Host Recognition of Nonself RNA journal January 2014
2′-O methylation of the viral mRNA cap evades host restriction by IFIT family members journal November 2010
Lineage-Specific Expansion of IFIT Gene Family: An Insight into Coevolution with IFN Gene Family journal June 2013
Alpha Interferon Induces Distinct Translational Control Programs To Suppress Hepatitis C Virus RNA Replication journal April 2003
Interferon-Induced Ifit2/ISG54 Protects Mice from Lethal VSV Neuropathogenesis journal May 2012
Cross-Reactive Neutralizing Antibodies Directed against Pandemic H1N1 2009 Virus Are Protective in a Highly Sensitive DBA/2 Mouse Influenza Model journal May 2010
Rational Design of a Live Attenuated Dengue Vaccine: 2′-O-Methyltransferase Mutants Are Highly Attenuated and Immunogenic in Mice and Macaques journal August 2013
A Role for Ifit2 in Restricting West Nile Virus Infection in the Brain journal June 2013
The broad-spectrum antiviral functions of IFIT and IFITM proteins journal December 2012
Generation of microglial cells from mouse embryonic stem cells journal August 2010
Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5 journal January 2011
Innate immune restriction and antagonism of viral RNA lacking 2׳-O methylation journal May 2015
Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle. journal November 1987
Culture and Differentiation of Mouse Tracheal Epithelial Cells book January 2012
Ebola Virus VP30-Mediated Transcription Is Regulated by RNA Secondary Structure Formation journal September 2002
Structure of influenza A polymerase bound to the viral RNA promoter journal November 2014
Viral Stress-inducible Protein p56 Inhibits Translation by Blocking the Interaction of eIF3 with the Ternary Complex eIF2·GTP·Met-tRNA i journal July 2003
RNA-Guided Human Genome Engineering via Cas9 journal January 2013
Interferon Induced IFIT Family Genes in Host Antiviral Defense journal January 2013
Interferon-inducible protein, P56, inhibits HPV DNA replication by binding to the viral protein E1 journal November 2008
Rational Design of a Flavivirus Vaccine by Abolishing Viral RNA 2'-O Methylation journal March 2013
Processing of Genome 5′ Termini as a Strategy of Negative-Strand RNA Viruses to Avoid RIG-I-Dependent Interferon Induction journal April 2008
A Mouse Model for Evaluation of Prophylaxis and Therapy of Ebola Hemorrhagic Fever journal September 1998
La Crosse virions contain a primer-stimulated RNA polymerase and a methylated cap-dependent endonuclease. journal January 1984
Characterization of La Crosse virus small-genome transcripts. journal January 1984

Cited By (5)

Filovirus Strategies to Escape Antiviral Responses book January 2017
Structure of human IFIT1 with capped RNA reveals adaptable mRNA binding and mechanisms for sensing N1 and N2 ribose 2′-O methylations journal March 2017
Animal Models for Influenza A Virus Infection Incorporating the Involvement of Innate Host Defenses: Enhanced Translational Value of the Porcine Model journal January 2018
Systems-based approach to examine the cytokine responses in primary mouse lung macrophages infected with low pathogenic avian Influenza virus circulating in South East Asia journal May 2017
Host Cell Restriction Factors that Limit Influenza A Infection journal December 2017

Similar Records

Human IFIT3 Modulates IFIT1 RNA Binding Specificity and Protein Stability
Journal Article · Thu Mar 08 00:00:00 EST 2018 · Immunity · OSTI ID:1351392

A Viral RNA Structural Element Alters Host Recognition of Nonself RNA
Journal Article · Thu Jan 30 00:00:00 EST 2014 · Science · OSTI ID:1351392

Impact of Porcine Arterivirus, Influenza B, and Their Coinfection on Antiviral Response in the Porcine Lung
Journal Article · Wed Nov 11 00:00:00 EST 2020 · Pathogens · OSTI ID:1351392