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Title: Expanding the eukaryotic genetic code

Patent ·
OSTI ID:1345382

This invention provides compositions and methods for producing translational components that expand the number of genetically encoded amino acids in eukaryotic cells. The components include orthogonal tRNAs, orthogonal aminoacyl-tRNA synthetases, orthogonal pairs of tRNAs/synthetases and unnatural amino acids. Proteins and methods of producing proteins with unnatural amino acids in eukaryotic cells are also provided.

Research Organization:
The Scripps Reserach Institute, La Jolla, CA (United States)
Sponsoring Organization:
USDOE
DOE Contract Number:
FG03-00ER45812
Assignee:
The Scripps Reserach Institute
Patent Number(s):
9,580,721
Application Number:
14/574,257
OSTI ID:
1345382
Resource Relation:
Patent File Date: 2014 Dec 17
Country of Publication:
United States
Language:
English

References (144)

L-phenylalanyl-tRNA synthetase mutants, a process for the preparation thereof and the use thereof for the in vivo incorporation of non-proteinogenous amino acids into peptides or proteins patent December 1994
Tissue type plasminogen activator (t-PA) variants: compositions and methods of use patent March 2004
Glycoprotein synthesis patent August 2005
In vivo incorporation of unnatural amino acids patent May 2006
Methods and compositions for the production of orthogonal tRNA-aminoacyl tRNA synthetase pairs patent August 2006
Glycoprotein synthesis patent October 2006
Glycoprotein synthesis patent February 2007
Glycoprotein synthesis patent April 2007
Glycoprotein synthesis patent May 2007
Glycoprotein synthesis patent July 2007
Glycoprotein synthesis patent August 2007
Methods and composition for the production of orthogonal tRNA-aminoacyltRNA synthetase pairs patent April 2008
In vivo incorporation of unnatural amino acids patent May 2008
In vivo site-specific incorporation of N-acetyl-galactosamine amino acids in eubacteria patent May 2008
Site specific incorporation of heavy atom-containing unnatural amino acids into proteins for structure determination patent July 2008
Site specific incorporation of keto amino acids into proteins patent October 2008
Site-specific incorporation of redox active amino acids into proteins patent February 2009
Site specific incorporation of keto amino acids into proteins patent April 2009
Compositions of orthogonal glutamyl-tRNA and aminoacyl-tRNA synthetase pairs and uses thereof patent May 2009
Glycoprotein synthesis patent July 2009
Compositions of orthogonal lysyl-tRNA and aminoacyl-tRNA synthetase pairs and uses thereof patent August 2009
Expanding the eukaryotic genetic code patent October 2009
Expanding the eukaryotic genetic code patent November 2009
Expanding the eukaryotic genetic code patent December 2009
Compositions of orthogonal lysyl-tRNA and aminoacyl-tRNA synthetase pairs and uses thereof patent December 2009
In vivo incorporation of unnatural amino acids patent December 2009
Protein arrays patent January 2010
Selective incorporation of 5-hydroxytryptophan into proteins in mammalian cells patent May 2010
Methods and composition for the production of orthogonal tRNA-aminoacyltRNA synthetase pairs patent May 2010
In vivo incorporation of alkynyl amino acids into proteins in eubacteria patent May 2010
Selective incorporation of 5-hydroxytryptophan into proteins in mammalian cells patent June 2010
Genetically programmed expression of proteins containing the unnatural amino acid phenylselenocysteine patent September 2010
Expanding the eukaryotic genetic code patent September 2010
Genetically encoded fluorescent coumarin amino acids patent October 2010
In vivo incorporation of alkynyl amino acids into proteins in eubacteria patent November 2010
Glycoprotein synthesis patent November 2010
Glycoprotein synthesis patent November 2010
patent-application October 2004
Unnatural reactive amino acid genetic code additions patent-application December 2004
Expanding the eukaryotic genetic code patent-application January 2005
Selective incorporation of 5-hydroxytryptophan into proteins in mammalian cells patent-application June 2005
Methods and composition for the production of orthogonal tRNA-aminoacyltRNA synthetase pairs patent-application September 2005
Site-specific incorporation of redox active amino acids into proteins patent-application October 2005
In vivo incorporation of unnatural amino acids patent-application November 2005
Site specific incorporation of heavy atom-containing unnatural amino acids into proteins for structure determination patent-application December 2005
Methods and composition for the production of orthogonal tRNA-aminoacyltRNA synthetase pairs patent-application March 2006
Site specific incorporation of keto amino acids into proteins patent-application March 2006
In vivo incorporation of alkynyl amino acids into proteins in eubacteria patent-application April 2006
Site-specific labeling of proteins for NMR studies patent-application May 2006
In vivo site-specific incorporation of N-acetyl-galactosamine amino acids in eubacteria patent-application May 2006
Adding photoregulated amino acids to the genetic code patent-application June 2006
Compositions of orthogonal leucyl-trna and aminoacyl-trna synthetase pairs and uses thereof patent-application July 2006
Compositions of orthogonal lysyl-tRNA and aminoacyl-tRNA synthetase pairs and uses thereof patent-application August 2006
Methods and composition for the production of orthogonal tRNA-aminoacyltRNA synthetase pairs patent-application October 2006
Unnatural reactive amino acid genetic code additions patent-application November 2006
Site-specific incorporation of redox active amino acids into proteins patent-application January 2007
Composition of orthogonal glutamyl-trna and aminoacyl-trna synthetase pairs and uses thereof patent-application January 2007
Compositions of orthogonal lysyl-trna and aminoacyl-trna synthetase pairs and uses thereof patent-application February 2007
Selective incorporation of 5-hydroxytryptophan into proteins in mammalian cells patent-application May 2007
In vivo incorporation of unnatural amino acids patent-application May 2007
Expanding the eukaryotic genetic code patent-application July 2007
Expanding the eukaryotic genetic code patent-application July 2007
Glycoprotein synthesis patent-application July 2007
Selective posttranslational modification of phage-displayed polypeptides patent-application August 2007
Glycoprotein synthesis patent-application August 2007
Genetically programmed expression of proteins containing the unnatural amino acid phenylselenocysteine patent-application October 2007
Systems for the expression of orthogonal translation components in eubacterial host cells patent-application December 2007
Genetically encoded fluorescent coumarin amino acids patent-application February 2008
In Vivo Site-Specific Incorporation of N-Acetyl-Galactosamine Amino Acids in Eubacteria patent-application March 2008
Genetically programmed expression of selectively sulfated proteins in eubacteria patent-application May 2008
Genetic incorporation of unnatural amino acids into proteins in mammalian cells patent-application July 2008
In vivo incorporation of unnatural amino acids patent-application July 2008
In vivo incorporation of unnatural amino acids patent-application July 2008
Site-Specific Labeling of Proteins for Nmr Studies patent-application July 2008
Expanding the eukaryotic genetic code patent-application July 2008
Glycoprotein synthesis patent-application September 2008
In Vivo Incorporation of Alkynyl Amino Acids into Proteins in Eubacteria patent-application September 2008
Site specific incorporation of keto amino acids into proteins patent-application September 2008
Expanding the eukaryotic genetic code patent-application September 2008
Orthogonal Translation Components for the in Vivo Incorporation of Unnatural Amino Acids patent-application September 2008
In vivo site-sepecific incorporation of N-acetyl-galactosamine amino acids in eubacteria patent-application October 2008
In vivo incorporation of unnatural amino acids patent-application October 2008
Methods and composition for the production of orthogonal tRNA-aminoacyl tRNA synthetase pairs patent-application February 2009
In vivo incorporation of unnatural amino acids patent-application March 2009
Site-specific labeling of proteins for NMR studies patent-application March 2009
Selective Posttranslational Modification of Phage-Displayed Polypeptides patent-application May 2009
Genetically Encoded Boronate Amino Acid patent-application June 2009
Directed evolution using proteins comprising unnatural amino acids patent-application June 2009
Systems for the Expression of Orthogonal Translation Components Eubacterial Host Cells patent-application July 2009
Adding photoregulated amino acids to the genetic code patent-application July 2009
In vivo unnatural amino acid expression in the methylotrophic yeast pichia pastoris patent-application August 2009
Genetic Incorporation of 3-Aminotyrosine Into Reductases patent-application August 2009
Genetically Programmed Expression of Proteins patent-application August 2009
Site specific incorporation of keto amino acids into proteins patent-application August 2009
Methods and compositions for the production of orthogonal tRNA-aminoacyl tRNA synthetase pairs patent-application September 2009
Breaking immunological toterance with a genetically encoded unnatural amino acid patent-application October 2009
Genetically programmed expression of selectively sulfated proteins in eubacteria patent-application November 2009
Genetically encoded coumarin amino acids patent-application December 2009
Site-specific incorporation of redox active amino acids into proteins patent-application December 2009
Glycoprotein synthesis patent-application January 2010
Genetic incorporation of unnatural amino acids into proteins in mammalian cells patent-application January 2010
Production of carrier-peptide conjugates using chemically reactive unnatural amino acids patent-application November 2010
Glutamine analogues as potential antimalarials journal March 1991
The tyrosyl-tRNA synthetase from Escherichia coli: Complete nucleotide sequence of the structural gene journal December 1982
Synthesis of novel α-amino-acids and derivatives using radical chemistry: synthesis of L- and D-α-amino-adipic acids, L-α journal January 1987
Bio–incorporation of telluromethionine into buried residues of dihydrofolate reductase journal May 1994
Structure of tyrosyl-tRNA synthetase refined at 2.3 Å resolution: Interaction of the enzyme with the tyrosyl adenylate intermediate journal July 1989
Bioincorporation of telluromethionine into proteins: a promising new approach for X-ray structure analysis of proteins journal July 1997
Enzyme-Linked Immunosorbent Assay (Elisa) for Detection of Human Reovirus-like Agent of Infantile Gastroenteritis journal August 1977
Probing Protein Structure and Function with an Expanded Genetic Code journal March 1995
Absolute configuration of the enantiomers of 7-chloro-4-[[4-(diethylamino)-1-methylbutyl]amino]quinoline (chloroquine) journal March 1988
Exploring the Limits of Codon and Anticodon Size journal February 2002
Structurally Modified Firefly Luciferase. Effects of Amino Acid Substitution at Position 286
  • Arslan, Tuncer; Mamaev, Sergey V.; Mamaeva, Natalia V.
  • Journal of the American Chemical Society, Vol. 119, Issue 45, p. 10877-10887 https://doi.org/10.1021/ja971927a
journal November 1997
Synthesis and Photophysical Properties of Fluorescent Derivatives of Methylmercury journal January 1996
In Vivo Photocrosslinking with Unnatural Amino Acid Mutagenesis journal November 2002
Addition of p-Azido-L-phenylalanine to the Genetic Code of Escherichia coli
  • Chin, Jason W.; Santoro, Stephen W.; Martin, Andrew B.
  • Journal of the American Chemical Society, Vol. 124, Issue 31, p. 9026-9027 https://doi.org/10.1021/ja027007w
journal July 2002
Addition of a photocrosslinking amino acid to the genetic code of Escherichia coli journal August 2002
An Expanded Eukaryotic Genetic Code journal August 2003
Progress Toward an Expanded Eukaryotic Genetic Code journal June 2003
Preparation of biological labels with acetylenic linker arms journal January 1997
An expanding genetic code journal July 2005
Adding Amino Acids with Novel Reactivity to the Genetic Code of Saccharomyces Cerevisiae
  • Deiters, Alexander; Cropp, T. Ashton; Mukherji, Mridul
  • Journal of the American Chemical Society, Vol. 125, Issue 39, p. 11782-11783 https://doi.org/10.1021/ja0370037
journal October 2003
Unnatural amino acids as probes of protein structure and function journal December 2000
A bacterial amber suppressor in Saccharomyces cerevisiae is selectively recognized by a bacterial aminoacyl-tRNA synthetase. journal April 1990
Expanding tRNA recognition of a tRNA synthetase by a single amino acid change journal May 2003
Programming peptidomimetic syntheses by translating genetic codes designed de novo journal May 2003
Site-specific incorporation of biotinylated amino acids to identify surface-exposed residues in integral membrane proteins journal October 1997
Specific Covalent Labeling of Recombinant Protein Molecules Inside Live Cells journal July 1998
An engineered Escherichia coli tyrosyl-tRNA synthetase for site-specific incorporation of an unnatural amino acid into proteins in eukaryotic translation and its application in a wheat germ cell-free system journal July 2002
Incorporation of azides into recombinant proteins for chemoselective modification by the Staudinger ligation journal December 2001
Click Chemistry: Diverse Chemical Function from a Few Good Reactions journal June 2001
Chemoselective ligation reactions with proteins, oligosaccharides and cells journal December 1998
Click Chemistry In Situ: Acetylcholinesterase as a Reaction Vessel for the Selective Assembly of a Femtomolar Inhibitor from an Array of Building Blocks journal March 2002
Progress toward the evolution of an organism with an expanded genetic code journal April 1999
Expanding the genetic code: selection of efficient suppressors of four-base codons and identification of “shifty” four-base codons with a library approach in Escherichia coli journal March 2001
Engineering Chemical Reactivity on Cell Surfaces Through Oligosaccharide Biosynthesis journal May 1997
Regulated phosphorylation and dephosphorylation of GAL4, a transcriptional activator. journal August 1989
Site-specific incorporation of an unnatural amino acid into proteins in mammalian cells journal November 2002
Activity-Based Protein Profiling in Vivo Using a Copper(I)-Catalyzed Azide-Alkyne [3 + 2] Cycloaddition
  • Speers, Anna E.; Adam, Gregory C.; Cravatt, Benjamin F.
  • Journal of the American Chemical Society, Vol. 125, Issue 16, p. 4686-4687 https://doi.org/10.1021/ja034490h
journal April 2003
Protein Tyrosine Kinase Csk-Catalyzed Phosphorylation of Src Containing Unnatural Tyrosine Analogues journal September 2001
Expanding the Genetic Code of Escherichia coli journal April 2001
Addition of the keto functional group to the genetic code of Escherichia coli journal December 2002
Bioconjugation by Copper(I)-Catalyzed Azide-Alkyne [3 + 2] Cycloaddition journal March 2003
A New Strategy for the Site-Specific Modification of Proteins in Vivo journal June 2003

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