Spectroscopic determination of ecologically relevant plant secondary metabolites

Couture, John J.; Singh, Aditya; Rubert-Nason, Kennedy F.; Serbin, Shawn P.; Lindroth, Richard L.; Townsend, Philip A.

doi:10.1111/2041-210X.12596

Title: Spectroscopic determination of ecologically relevant plant secondary metabolites

Journal Article · Sat Jul 23 00:00:00 EDT 2016 · Methods in Ecology and Evolution (Online)

DOI:https://doi.org/10.1111/2041-210X.12596· OSTI ID:1336058

Couture, John J. ^[1]; Singh, Aditya ^[1]; Rubert-Nason, Kennedy F. ^[2]; Serbin, Shawn P. ^[1]; Lindroth, Richard L. ^[2]; Townsend, Philip A. ^[1]

University of Wisconsin-Madison, Madison, WI (United States). Department of Forest and Wildlife Ecology
University of Wisconsin-Madison, Madison, WI (United States). Department of Entomology

Spectroscopy has recently emerged as an effective method to accurately characterize leaf biochemistry in living tissue through the application of chemometric approaches to foliar optical data, but this approach has not been widely used for plant secondary metabolites. Here in this paper, we examine the ability of reflectance spectroscopy to quantify specific phenolic compounds in trembling aspen (Populus tremuloides) and paper birch (Betula papyrifera) that play influential roles in ecosystem functioning related to trophic-level interactions and nutrient cycling.

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Research Organization:: Brookhaven National Lab. (BNL), Upton, NY (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES)

Grant/Contract Number:: SC0012704

OSTI ID:: 1336058

Report Number(s):: BNL-112412-2016-JA; R&D Project: 21087; YN0100000

Journal Information:: Methods in Ecology and Evolution (Online), Vol. 7, Issue 11; ISSN 2041-210X

Publisher:: British Ecological Society - WileyCopyright Statement

Country of Publication:: United States

Language:: English

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Cited by: 69 works

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References (48)

A Method for Isolating Condensed Tannins from Crude Plant Extracts with Trivalent Ytterbium Giner-Chavez, Bertha I.; Van Soest, Peter J.; Robertson, James B. Journal of the Science of Food and Agriculture, Vol. 74, Issue 3 https://doi.org/10.1002/(SICI)1097-0010(199707)74:3<359::AID-JSFA811>3.0.CO;2-C	journal	July 1997
Sparse Modeling Using Orthogonal Forward Regression With PRESS Statistic and Regularization Chen, S.; Hong, X.; Harris, C. J. IEEE Transactions on Systems, Man and Cybernetics, Part B (Cybernetics), Vol. 34, Issue 2 https://doi.org/10.1109/TSMCB.2003.817107	journal	April 2004
Extraction of dry leaf spectral features from reflectance spectra of green vegetation Gao, Bo-Cai; Goetz, Alexander F. H. Remote Sensing of Environment, Vol. 47, Issue 3 https://doi.org/10.1016/0034-4257(94)90104-X	journal	March 1994
Comparative analysis of three chemometric techniques for the spectroradiometric assessment of canopy chlorophyll content in winter wheat Atzberger, Clement; Guérif, Martine; Baret, Frédéric Computers and Electronics in Agriculture, Vol. 73, Issue 2 https://doi.org/10.1016/j.compag.2010.05.006	journal	August 2010
Performance of some variable selection methods when multicollinearity is present Chong, Il-Gyo; Jun, Chi-Hyuck Chemometrics and Intelligent Laboratory Systems, Vol. 78, Issue 1-2 https://doi.org/10.1016/j.chemolab.2004.12.011	journal	July 2005
Water-removed spectra increase the retrieval accuracy when estimating savanna grass nitrogen and phosphorus concentrations Ramoelo, Abel; Skidmore, Andrew K.; Schlerf, Martin ISPRS Journal of Photogrammetry and Remote Sensing, Vol. 66, Issue 4 https://doi.org/10.1016/j.isprsjprs.2011.01.008	journal	July 2011
Spectrometric prediction of secondary metabolites and nitrogen in fresh Eucalyptus foliage: towards remote sensing of the nutritional quality of foliage for leaf-eating marsupials Ebbers, M. J. H.; Wallis, I. R.; Dury, S. Australian Journal of Botany, Vol. 50, Issue 6 https://doi.org/10.1071/BT02025	journal	January 2002
Adaptations of quaking aspen (Populus tremuloides Michx.) for defense against herbivores Lindroth, Richard L.; St. Clair, Samuel B. Forest Ecology and Management, Vol. 299 https://doi.org/10.1016/j.foreco.2012.11.018	journal	July 2013
Spectroscopic sensitivity of real-time, rapidly induced phytochemical change in response to damage Couture, John J.; Serbin, Shawn P.; Townsend, Philip A. New Phytologist, Vol. 198, Issue 1 https://doi.org/10.1111/nph.12159	journal	February 2013
Tannins in nutrient dynamics of forest ecosystems - a review Kraus, Tamara E. C.; Dahlgren, Randy A.; Zasoski, Robert J. Plant and Soil, Vol. 256, Issue 1 https://doi.org/10.1023/A:1026206511084	journal	September 2003
Condensed tannin purification and characterization of tannin-associated proteins Hagerman, Ann E.; Butler, Larry G. Journal of Agricultural and Food Chemistry, Vol. 28, Issue 5 https://doi.org/10.1021/jf60231a011	journal	May 1980
Condensed tannins increase nitrogen recovery by trees following insect defoliation Madritch, Michael D.; Lindroth, Richard L. New Phytologist, Vol. 208, Issue 2 https://doi.org/10.1111/nph.13444	journal	May 2015
Spectral characteristics of lignin and soluble phenolics in the near infrared- a comparative study Soukupova, J.; Rock, B. N.; Albrechtova, J. International Journal of Remote Sensing, Vol. 23, Issue 15 https://doi.org/10.1080/01431160110104683	journal	January 2002
Predicting foliar biochemistry of tea (Camellia sinensis) using reflectance spectra measured at powder, leaf and canopy levels Bian, Meng; Skidmore, Andrew K.; Schlerf, Martin ISPRS Journal of Photogrammetry and Remote Sensing, Vol. 78 https://doi.org/10.1016/j.isprsjprs.2013.02.002	journal	April 2013
Near-infrared reflectance spectroscopy as a fast and non-destructive tool to predict foliar organic constituents of several woody species Petisco, C.; García-Criado, B.; Mediavilla, S. Analytical and Bioanalytical Chemistry, Vol. 386, Issue 6 https://doi.org/10.1007/s00216-006-0816-4	journal	October 2006
UHPLC-ESI/TOFMS Determination of Salicylate-like Phenolic Gycosides in Populus tremula Leaves Abreu, Ilka Nacif; Ahnlund, Maria; Moritz, Thomas Journal of Chemical Ecology, Vol. 37, Issue 8 https://doi.org/10.1007/s10886-011-9991-7	journal	July 2011
Application of Near-Infrared Reflectance Spectroscopy to the Simultaneous Prediction of Alkaloids and Phenolic Substances in Green Tea Leaves Schulz, H.; Engelhardt, U. H.; Wegent, A. Journal of Agricultural and Food Chemistry, Vol. 47, Issue 12 https://doi.org/10.1021/jf9813743	journal	December 1999
Spectroscopic determination of leaf morphological and biochemical traits for northern temperate and boreal tree species Serbin, Shawn P.; Singh, Aditya; McNeil, Brenden E. Ecological Applications, Vol. 24, Issue 7 https://doi.org/10.1890/13-2110.1	journal	October 2014
From Genes to Ecosystems: The Genetic Basis of Condensed Tannins and Their Role in Nutrient Regulation in a Populus Model System Schweitzer, Jennifer A.; Madritch, Michael D.; Bailey, Joseph K. Ecosystems, Vol. 11, Issue 6 https://doi.org/10.1007/s10021-008-9173-9	journal	August 2008
The pls Package: Principal Component and Partial Least Squares Regression in R Mevik, Bjørn-Helge; Wehrens, Ron Journal of Statistical Software, Vol. 18, Issue 2 https://doi.org/10.18637/jss.v018.i02	journal	January 2007
Nitrogen Cycles: Past, Present, and Future Galloway, J. N.; Dentener, F. J.; Capone, D. G. Biogeochemistry, Vol. 70, Issue 2 https://doi.org/10.1007/s10533-004-0370-0	journal	September 2004
Prediction of δ ¹³ C and δ ¹⁵ N in plant tissues with near-infrared reflectance spectroscopy Kleinebecker, Till; Schmidt, Sebastian R.; Fritz, Christian New Phytologist, Vol. 184, Issue 3 https://doi.org/10.1111/j.1469-8137.2009.02995.x	journal	November 2009
The role of polyphenols in terrestrial ecosystem nutrient cycling Hättenschwiler, Stephan; Vitousek, Peter M. Trends in Ecology & Evolution, Vol. 15, Issue 6 https://doi.org/10.1016/S0169-5347(00)01861-9	journal	June 2000
Using near-infrared reflectance spectroscopy to predict carbon, nitrogen and phosphorus content in heterogeneous plant material Gillon, Dominique; Houssard, Claudie; Joffre, Richard Oecologia, Vol. 118, Issue 2 https://doi.org/10.1007/s004420050716	journal	February 1999
Genetics, Environment, and Their Interaction Determine Efficacy of Chemical Defense in Trembling Aspen Donaldson, Jack R.; Lindroth, Richard L. Ecology, Vol. 88, Issue 3 https://doi.org/10.1890/06-0064	journal	March 2007
Consequences of elevated carbon dioxide and ozone for foliar chemical composition and dynamics in trembling aspen (Populus tremuloides) and paper birch (Betula papyrifera) Lindroth, Richard L.; Kopper, Brian J.; Parsons, William F. J. Environmental Pollution, Vol. 115, Issue 3 https://doi.org/10.1016/S0269-7491(01)00229-9	journal	December 2001
PLS-regression: a basic tool of chemometrics Wold, Svante; Sjöström, Michael; Eriksson, Lennart Chemometrics and Intelligent Laboratory Systems, Vol. 58, Issue 2 https://doi.org/10.1016/S0169-7439(01)00155-1	journal	October 2001
Characterization of phenolic glycosides from quaking aspen Lindroth, Richard L.; Hsia, M. T. Stephen; Scriber, J. Mark Biochemical Systematics and Ecology, Vol. 15, Issue 6 https://doi.org/10.1016/0305-1978(87)90045-7	journal	November 1987
Critique of stepwise multiple linear regression for the extraction of leaf biochemistry information from leaf reflectance data Grossman, Y. L.; Ustin, S. L.; Jacquemoud, S. Remote Sensing of Environment, Vol. 56, Issue 3 https://doi.org/10.1016/0034-4257(95)00235-9	journal	June 1996
Reflectance spectroscopy of fresh whole leaves for the estimation of chemical concentration Curran, Paul J.; Dungan, Jennifer L.; Macler, Bruce A. Remote Sensing of Environment, Vol. 39, Issue 2 https://doi.org/10.1016/0034-4257(92)90133-5	journal	February 1992
Spectral and chemical analysis of tropical forests: Scaling from leaf to canopy levels Asner, G.; Martin, R. Remote Sensing of Environment, Vol. 112, Issue 10 https://doi.org/10.1016/j.rse.2008.07.003	journal	October 2008
Elevated temperature and periodic water stress alter growth and quality of common milkweed (Asclepias syriaca) and monarch (Danaus plexippus) larval performance Couture, John J.; Serbin, Shawn P.; Townsend, Philip A. Arthropod-Plant Interactions, Vol. 9, Issue 2 https://doi.org/10.1007/s11829-015-9367-y	journal	March 2015
Rethinking the role of many plant phenolics - protection from photodamage not herbivores? Close, Dugald C.; McArthur, Clare Oikos, Vol. 99, Issue 1 https://doi.org/10.1034/j.1600-0706.2002.990117.x	journal	October 2002
Plant phenolics and absorption features in vegetation reflectance spectra near 1.66 μm Kokaly, Raymond F.; Skidmore, Andrew K. International Journal of Applied Earth Observation and Geoinformation, Vol. 43 https://doi.org/10.1016/j.jag.2015.01.010	journal	December 2015
Determination of carbon fraction and nitrogen concentration in tree foliage by near infrared reflectances: a comparison of statistical methods Bolster, Katherine L.; Martin, Mary E.; Aber, John D. Canadian Journal of Forest Research, Vol. 26, Issue 4 https://doi.org/10.1139/x26-068	journal	April 1996
Interactive effects of condensed tannin and cellulose additions on soil respiration Madritch, Michael D.; Jordan, Lisa M.; Lindroth, Richard L. Canadian Journal of Forest Research, Vol. 37, Issue 10 https://doi.org/10.1139/X07-047	journal	October 2007
NDWI—A normalized difference water index for remote sensing of vegetation liquid water from space Gao, Bo-cai Remote Sensing of Environment, Vol. 58, Issue 3 https://doi.org/10.1016/S0034-4257(96)00067-3	journal	December 1996
Rapid phytochemical analysis of birch (Betula) and poplar (Populus) foliage by near-infrared reflectance spectroscopy Rubert-Nason, Kennedy F.; Holeski, Liza M.; Couture, John J. Analytical and Bioanalytical Chemistry, Vol. 405, Issue 4 https://doi.org/10.1007/s00216-012-6513-6	journal	November 2012
The Collinearity Problem in Linear Regression. The Partial Least Squares (PLS) Approach to Generalized Inverses Wold, S.; Ruhe, A.; Wold, H. SIAM Journal on Scientific and Statistical Computing, Vol. 5, Issue 3 https://doi.org/10.1137/0905052	journal	September 1984
The conversion of procyanidins and prodelphinidins to cyanidin and delphinidin Porter, Lawrence J.; Hrstich, Liana N.; Chan, Bock G. Phytochemistry, Vol. 25, Issue 1 https://doi.org/10.1016/S0031-9422(00)94533-3	journal	December 1985
Changes in plant defense chemistry (pyrrolizidine alkaloids) revealed through high-resolution spectroscopy Carvalho, Sabrina; Macel, Mirka; Schlerf, Martin ISPRS Journal of Photogrammetry and Remote Sensing, Vol. 80 https://doi.org/10.1016/j.isprsjprs.2013.03.004	journal	June 2013
Imaging spectroscopy algorithms for mapping canopy foliar chemical and morphological traits and their uncertainties Singh, Aditya; Serbin, Shawn P.; McNeil, Brenden E. Ecological Applications, Vol. 25, Issue 8 https://doi.org/10.1890/14-2098.1	journal	December 2015
The Rise of Chemodiversity in Plants Weng, Jing-Ke; Philippe, Ryan N.; Noel, Joseph P. Science, Vol. 336, Issue 6089 https://doi.org/10.1126/science.1217411	journal	June 2012
Phenolic glycosides of the Salicaceae and their role as anti-herbivore defenses Boeckler, G. Andreas; Gershenzon, Jonathan; Unsicker, Sybille B. Phytochemistry, Vol. 72, Issue 13 https://doi.org/10.1016/j.phytochem.2011.01.038	journal	September 2011
Determination of Condensed Tannin Monomers in Environmental Samples by Capillary Gas Chromatography of Acid Depolymerization Extracts Hernes, Peter J.; Hedges, John I. Analytical Chemistry, Vol. 72, Issue 20 https://doi.org/10.1021/ac991301y	journal	October 2000
Poplar defense against insect herbivoresThis review is one of a selection of papers published in the Special Issue on Poplar Research in Canada. Philippe, Ryan N.; Bohlmann, Jörg Canadian Journal of Botany, Vol. 85, Issue 12 https://doi.org/10.1139/B07-109	journal	December 2007
Carbon and nitrogen dynamics in a forest soil amended with purified tannins from different plant species Kraus, Tamara E. C.; Zasoski, Robert J.; Dahlgren, Randy A. Soil Biology and Biochemistry, Vol. 36, Issue 2 https://doi.org/10.1016/j.soilbio.2003.10.006	journal	February 2004
Leaf optical properties reflect variation in photosynthetic metabolism and its sensitivity to temperature Serbin, Shawn P.; Dillaway, Dylan N.; Kruger, Eric L. Journal of Experimental Botany, Vol. 63, Issue 1 https://doi.org/10.1093/jxb/err294	journal	October 2011

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54 ENVIRONMENTAL SCIENCES
condensed tannins
paper birch
phenolics
phytochemistry
plant defence
salicinoids
salicortin
spectroscopy
trembling aspen
tremulacin

Title: Spectroscopic determination of ecologically relevant plant secondary metabolites

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