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Title: Genome-wide analysis of lectin receptor-like kinases in Populus

Abstract

Receptor-like kinases (RLKs) belong to a large protein family with over 600 members in Arabidopsis and over 1000 in rice. Among RLKs, the lectin receptor-like kinases (LecRLKs) possess a characteristic extracellular carbohydrate-binding lectin domain and play important roles in plant development and innate immunity. In addition, there are 75 and 173 LecRLKs in Arabidopsis and rice, respectively. However, little is known about LecRLKs in perennial woody plants.

Authors:
 [1];  [1];  [1];  [1];  [1];  [2];  [2];  [3];  [4];  [1]; ORCiD logo [1]
  1. Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
  2. USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
  3. HudsonAlpha Institute for Biotechnology, Huntsville, AL (United States)
  4. HudsonAlpha Institute for Biotechnology, Huntsville, AL (United States); USDOE Joint Genome Institute (JGI), Walnut Creek, CA (United States)
Publication Date:
Research Org.:
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1324199
Grant/Contract Number:  
AC05-00OR22725
Resource Type:
Journal Article: Accepted Manuscript
Journal Name:
BMC Genomics
Additional Journal Information:
Journal Volume: 17; Journal Issue: 1; Journal ID: ISSN 1471-2164
Publisher:
Springer
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; lectin domain; lectin receptor-like kinase (LecRLK); Populus; perennial woody plant; receptor like-kinase (RLK); transmembrane kinase

Citation Formats

Yang, Yongil, Labbé, Jessy, Muchero, Wellington, Yang, Xiaohan, Jawdy, Sara S., Kennedy, Megan, Johnson, Jenifer, Sreedasyam, Avinash, Schmutz, Jeremy, Tuskan, Gerald A., and Chen, Jin -Gui. Genome-wide analysis of lectin receptor-like kinases in Populus. United States: N. p., 2016. Web. doi:10.1186/s12864-016-3026-2.
Yang, Yongil, Labbé, Jessy, Muchero, Wellington, Yang, Xiaohan, Jawdy, Sara S., Kennedy, Megan, Johnson, Jenifer, Sreedasyam, Avinash, Schmutz, Jeremy, Tuskan, Gerald A., & Chen, Jin -Gui. Genome-wide analysis of lectin receptor-like kinases in Populus. United States. doi:10.1186/s12864-016-3026-2.
Yang, Yongil, Labbé, Jessy, Muchero, Wellington, Yang, Xiaohan, Jawdy, Sara S., Kennedy, Megan, Johnson, Jenifer, Sreedasyam, Avinash, Schmutz, Jeremy, Tuskan, Gerald A., and Chen, Jin -Gui. Thu . "Genome-wide analysis of lectin receptor-like kinases in Populus". United States. doi:10.1186/s12864-016-3026-2. https://www.osti.gov/servlets/purl/1324199.
@article{osti_1324199,
title = {Genome-wide analysis of lectin receptor-like kinases in Populus},
author = {Yang, Yongil and Labbé, Jessy and Muchero, Wellington and Yang, Xiaohan and Jawdy, Sara S. and Kennedy, Megan and Johnson, Jenifer and Sreedasyam, Avinash and Schmutz, Jeremy and Tuskan, Gerald A. and Chen, Jin -Gui},
abstractNote = {Receptor-like kinases (RLKs) belong to a large protein family with over 600 members in Arabidopsis and over 1000 in rice. Among RLKs, the lectin receptor-like kinases (LecRLKs) possess a characteristic extracellular carbohydrate-binding lectin domain and play important roles in plant development and innate immunity. In addition, there are 75 and 173 LecRLKs in Arabidopsis and rice, respectively. However, little is known about LecRLKs in perennial woody plants.},
doi = {10.1186/s12864-016-3026-2},
journal = {BMC Genomics},
number = 1,
volume = 17,
place = {United States},
year = {Thu Sep 01 00:00:00 EDT 2016},
month = {Thu Sep 01 00:00:00 EDT 2016}
}

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Free Publicly Available Full Text
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Cited by: 5 works
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Works referenced in this record:

The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)
journal, September 2006


MUSCLE: multiple sequence alignment with high accuracy and high throughput
journal, March 2004

  • Edgar, R. C.
  • Nucleic Acids Research, Vol. 32, Issue 5, p. 1792-1797
  • DOI: 10.1093/nar/gkh340