Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park
Abstract
We isolated geobacillus sp. Y412MC52 from Obsidian Hot Spring, Yellowstone National Park, Montana, USA under permit from the National Park Service. The genome was sequenced, assembled, and annotated by the DOE Joint Genome Institute and deposited at the NCBI in December 2011 (CP002835). Based on 16S rRNA genes and average nucleotide identity, Geobacillus sp. Y412MC52 and the related Geobacillus sp. Y412MC61 appear to be members of a new species of Geobacillus. Moreover, te genome of Geobacillus sp. Y412MC52 consists of one circular chromosome of 3,628,883 bp, an average G + C content of 52 % and one circular plasmid of 45,057 bp and an average G + C content of 45 %. Y412MC52 possesses arabinan, arabinoglucuronoxylan, and aromatic acid degradation clusters for degradation of hemicellulose from biomass. Finally, we present transport and utilization clusters for other carbohydrates including starch, cellobiose, and - and -galactooligosaccharides.
- Authors:
-
- C5.6 Technologies Inc., Middleton, WI (United States)
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Los Alamos National Lab. (LANL), Los Alamos, NM (United States)
- Lucigen Corporation, Middleton, WI (United States)
- Publication Date:
- Research Org.:
- Los Alamos National Laboratory (LANL), Los Alamos, NM (United States); Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Biological and Environmental Research (BER)
- OSTI Identifier:
- 1259497
- Alternate Identifier(s):
- OSTI ID: 1265845
- Grant/Contract Number:
- FC02-07ER64494; AC02-05CH11231; AC52-07NA27344; AC02-06NA25396; AC05-00OR22725
- Resource Type:
- Journal Article: Accepted Manuscript
- Journal Name:
- Standards in Genomic Sciences
- Additional Journal Information:
- Journal Volume: 10; Journal Issue: 1; Journal ID: ISSN 1944-3277
- Publisher:
- BioMed Central
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES; Geobacillus sp. Y412MC52; Obsidian hot spring; Biomass; Arabinan; Xylan; G. thermocatenulatus
Citation Formats
Brumm, Phillip, Land, Miriam L., Hauser, Loren J., Jeffries, Cynthia D., Chang, Yun-Juan, and Mead, David A. Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park. United States: N. p., 2015.
Web. doi:10.1186/s40793-015-0075-0.
Brumm, Phillip, Land, Miriam L., Hauser, Loren J., Jeffries, Cynthia D., Chang, Yun-Juan, & Mead, David A. Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park. United States. https://doi.org/10.1186/s40793-015-0075-0
Brumm, Phillip, Land, Miriam L., Hauser, Loren J., Jeffries, Cynthia D., Chang, Yun-Juan, and Mead, David A. 2015.
"Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park". United States. https://doi.org/10.1186/s40793-015-0075-0. https://www.osti.gov/servlets/purl/1259497.
@article{osti_1259497,
title = {Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park},
author = {Brumm, Phillip and Land, Miriam L. and Hauser, Loren J. and Jeffries, Cynthia D. and Chang, Yun-Juan and Mead, David A.},
abstractNote = {We isolated geobacillus sp. Y412MC52 from Obsidian Hot Spring, Yellowstone National Park, Montana, USA under permit from the National Park Service. The genome was sequenced, assembled, and annotated by the DOE Joint Genome Institute and deposited at the NCBI in December 2011 (CP002835). Based on 16S rRNA genes and average nucleotide identity, Geobacillus sp. Y412MC52 and the related Geobacillus sp. Y412MC61 appear to be members of a new species of Geobacillus. Moreover, te genome of Geobacillus sp. Y412MC52 consists of one circular chromosome of 3,628,883 bp, an average G + C content of 52 % and one circular plasmid of 45,057 bp and an average G + C content of 45 %. Y412MC52 possesses arabinan, arabinoglucuronoxylan, and aromatic acid degradation clusters for degradation of hemicellulose from biomass. Finally, we present transport and utilization clusters for other carbohydrates including starch, cellobiose, and - and -galactooligosaccharides.},
doi = {10.1186/s40793-015-0075-0},
url = {https://www.osti.gov/biblio/1259497},
journal = {Standards in Genomic Sciences},
issn = {1944-3277},
number = 1,
volume = 10,
place = {United States},
year = {Mon Oct 19 00:00:00 EDT 2015},
month = {Mon Oct 19 00:00:00 EDT 2015}
}
Web of Science
Works referenced in this record:
A Numerical Classification of the Genus Bacillus
journal, July 1988
- Priest, F. G.; Goodfellow, M.; Todd, C.
- Microbiology, Vol. 134, Issue 7
Genome-wide identification, structural analysis and expression profiles of GRAS gene family in orchardgrass
journal, February 2020
- Xu, Xiaoheng; Feng, Guangyan; Huang, Linkai
- Molecular Biology Reports, Vol. 47, Issue 3
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
journal, February 2014
- Kim, M.; Oh, H. -S.; Park, S. -C.
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Vol. 64, Issue Pt 2
Three novel halotolerant and thermophilic Geobacillus strains from shallow marine vents
journal, January 2002
- Maugeri, Teresa L.; Gugliandolo, Concetta; Caccamo, Daniela
- Systematic and Applied Microbiology, Vol. 25, Issue 3
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
journal, April 2007
- Lagesen, Karin; Hallin, Peter; Rødland, Einar Andreas
- Nucleic Acids Research, Vol. 35, Issue 9
Molecular identification of rRNA group 3 bacilli (Ash, Farrow, Wallbanks and Collins) using a PCR probe test: Proposal for the creation of a new genus Paenibacillus
journal, January 1994
- Ash, Carol; Priest, Fergus G.; Collins, M. David
- Antonie van Leeuwenhoek, Vol. 64, Issue 3-4
Thermophilic Protease-Producing Geobacillus from Buranga Hot Springs in Western Uganda
journal, August 2002
- Hawumba, Joseph F.; Theron, Jacques; Brözel, Volker S.
- Current Microbiology, Vol. 45, Issue 2
DNA Relatedness of Thermus Strains, Description of Thermus brockianus sp. nov., and Proposal To Reestablish Thermus thermophilus (Oshima and Imahori)
journal, July 1995
- Williams, R. A. D.; Smith, K. E.; Welch, S. G.
- International Journal of Systematic Bacteriology, Vol. 45, Issue 3
Base-Calling of Automated Sequencer Traces Using Phred. I. Accuracy Assessment
journal, March 1998
- Ewing, Brent; Hillier, LaDeana; Wendl, Michael C.
- Genome Research, Vol. 8, Issue 3
The minimum information about a genome sequence (MIGS) specification
journal, May 2008
- Field, Dawn; Garrity, George; Gray, Tanya
- Nature Biotechnology, Vol. 26, Issue 5
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
journal, November 2009
- Liolios, Konstantinos; Chen, I-Min A.; Mavromatis, Konstantinos
- Nucleic Acids Research, Vol. 38, Issue suppl_1
Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
journal, July 2012
- Mead, David A.; Lucas, Susan; Copeland, Alex
- Standards in Genomic Sciences, Vol. 6, Issue 3
Isolation and Characterization of Acidothermus cellulolyticus gen. nov., sp. nov., a New Genus of Thermophilic, Acidophilic, Cellulolytic Bacteria
journal, July 1986
- MOHAGHEGHI, A.; GROHMANN, K.; HIMMEL, M.
- International Journal of Systematic Bacteriology, Vol. 36, Issue 3, p. 435-443
Thermus aquaticus gen. n. and sp. n., a Nonsporulating Extreme Thermophile
journal, January 1969
- Brock, Thomas D.; Freeze, Hudson
- Journal of Bacteriology, Vol. 98, Issue 1
Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.
journal, June 1990
- Woese, C. R.; Kandler, O.; Wheelis, M. L.
- Proceedings of the National Academy of Sciences, Vol. 87, Issue 12
tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
journal, March 1997
- Lowe, Todd M.; Eddy, Sean R.
- Nucleic Acids Research, Vol. 25, Issue 5
Prodigal: prokaryotic gene recognition and translation initiation site identification
journal, March 2010
- Hyatt, Doug; Chen, Gwo-Liang; LoCascio, Philip F.
- BMC Bioinformatics, Vol. 11, Issue 1
The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide
journal, January 2006
- Liolios, K.
- Nucleic Acids Research, Vol. 34, Issue 90001
IMG 4 version of the integrated microbial genomes comparative analysis system
journal, October 2013
- Markowitz, Victor M.; Chen, I-Min A.; Palaniappan, Krishna
- Nucleic Acids Research, Vol. 42, Issue D1
New xylanases to obtain modified eucalypt fibres with high-cellulose content
journal, October 2010
- Valls, Cristina; Gallardo, Oscar; Vidal, Teresa
- Bioresource Technology, Vol. 101, Issue 19
Multiplex profiling of serum proteins in solution using barcoded antibody fragments and next generation sequencing
journal, July 2020
- Brofelth, Mattias; Ekstrand, Anna Isinger; Gour, Shashank
- Communications Biology, Vol. 3, Issue 1
PHAST and RPHAST: phylogenetic analysis with space/time models
journal, December 2010
- Hubisz, M. J.; Pollard, K. S.; Siepel, A.
- Briefings in Bioinformatics, Vol. 12, Issue 1
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities
journal, March 1998
- Ewing, Brent; Green, Phil
- Genome Research, Vol. 8, Issue 3
Using the Velvet de novo Assembler for Short‐Read Sequencing Technologies
journal, September 2010
- Zerbino, Daniel R.
- Current Protocols in Bioinformatics, Vol. 31, Issue 1
DNA Relatedness of Thermus Strains, Description of Thermus brockianus sp. nov., and Proposal To Reestablish Thermus thermophilus (Oshima and Imahori)
journal, July 1995
- Williams, R. A. D.; Smith, K. E.; Welch, S. G.
- International Journal of Systematic Bacteriology, Vol. 45, Issue 3
Complete Genome Sequence of Geobacillus sp. Strain GHH01, a Thermophilic Lipase-Secreting Bacterium
journal, February 2013
- Wiegand, S.; Rabausch, U.; Chow, J.
- Genome Announcements, Vol. 1, Issue 2
The Glucuronic Acid Utilization Gene Cluster from Bacillus stearothermophilus T-6
journal, June 1999
- Shulami, Smadar; Gat, Orit; Sonenshein, Abraham L.
- Journal of Bacteriology, Vol. 181, Issue 12
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
journal, June 2010
- Darling, Aaron E.; Mau, Bob; Perna, Nicole T.
- PLoS ONE, Vol. 5, Issue 6
Degradation of biological macromolecules supports uncultured microbial populations in Guaymas Basin hydrothermal sediments
journal, June 2021
- Pérez Castro, Sherlynette; Borton, Mikayla A.; Regan, Kathleen
- The ISME Journal, Vol. 15, Issue 12
Rfam: an RNA family database
journal, January 2003
- Griffiths-Jones, S.
- Nucleic Acids Research, Vol. 31, Issue 1
Geobacillus gargensis sp. nov., a novel thermophile from a hot spring, and the reclassification of Bacillus vulcani as Geobacillus vulcani comb. nov.
journal, November 2004
- Nazina, T. N.
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Vol. 54, Issue 6
Fine Structure of Thermus aquaticus, an Extreme Thermophile
journal, January 1970
- Brock, Thomas D.; Edwards, Mercedes R.
- Journal of Bacteriology, Vol. 104, Issue 1
Characterization of a novel portal protein from deep-sea thermophilic bacteriophage GVE2
journal, September 2008
- Wang, Yiqian; Zhang, Xiaobo
- Gene, Vol. 421, Issue 1-2
Influence of supplemental endoglucanase or xylanase on volatile fatty acid production from ruminant feed by ruminal in vitro cultures
journal, October 2005
- Tricarico, Juan M.; Dawson, Karl A.
- Archives of Animal Nutrition, Vol. 59, Issue 5
Application of a recN sequence similarity analysis to the identification of species within the bacterial genus Geobacillus
journal, May 2005
- Zeigler, Daniel R.
- International Journal of Systematic and Evolutionary Microbiology, Vol. 55, Issue 3
Using both xylanase and laccase enzymes for pulp bleaching
journal, March 2009
- Valls, Cristina; Roncero, M. Blanca
- Bioresource Technology, Vol. 100, Issue 6
The Value of Basic Research: Discovery of Thermus aquaticus and Other Extreme Thermophiles
journal, August 1997
- Brock, Thomas D.
- Genetics, Vol. 146, Issue 4
Using both xylanase and laccase enzymes for pulp bleaching
journal, March 2009
- Valls, Cristina; Roncero, M. Blanca
- Bioresource Technology, Vol. 100, Issue 6
Geobacillus gargensis sp. nov., a novel thermophile from a hot spring, and the reclassification of Bacillus vulcani as Geobacillus vulcani comb. nov.
journal, November 2004
- Nazina, T. N.
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Vol. 54, Issue 6
Characterization of a novel portal protein from deep-sea thermophilic bacteriophage GVE2
journal, September 2008
- Wang, Yiqian; Zhang, Xiaobo
- Gene, Vol. 421, Issue 1-2
Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. th.
journal, March 2001
- Ivanov, M. V.; Lysenko, A. M.; Petrunyaka, V. V.
- International Journal of Systematic and Evolutionary Microbiology, Vol. 51, Issue 2
Geobacillus lituanicus sp. nov.
journal, November 2004
- Kuisiene, N.
- INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, Vol. 54, Issue 6
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
journal, May 2011
- Tamura, K.; Peterson, D.; Peterson, N.
- Molecular Biology and Evolution, Vol. 28, Issue 10
Consed: A Graphical Tool for Sequence Finishing
journal, March 1998
- Gordon, David; Abajian, Chris; Green, Phil
- Genome Research, Vol. 8, Issue 3
Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
journal, January 2001
- Krogh, Anders; Larsson, Björn; von Heijne, Gunnar
- Journal of Molecular Biology, Vol. 305, Issue 3
Geobacillus toebii sp. nov., a novel thermophilic bacterium isolated from hay compost.
journal, November 2002
- Sung, M. H.; Kim, H.; Bae, J. W.
- International Journal of Systematic and Evolutionary Microbiology, Vol. 52, Issue 6
PHAST and RPHAST: phylogenetic analysis with space/time models
journal, December 2010
- Hubisz, M. J.; Pollard, K. S.; Siepel, A.
- Briefings in Bioinformatics, Vol. 12, Issue 1
Genomic characterization of thermophilic Geobacillus species isolated from the deepest sea mud of the Mariana Trench
journal, May 2004
- Takami, Hideto; Nishi, Shinro; Lu, Jei
- Extremophiles, Vol. 8, Issue 5
Rfam: an RNA family database
journal, January 2003
- Griffiths-Jones, S.
- Nucleic Acids Research, Vol. 31, Issue 1
The minimum information about a genome sequence (MIGS) specification
journal, May 2008
- Field, Dawn; Garrity, George; Gray, Tanya
- Nature Biotechnology, Vol. 26, Issue 5
tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
journal, March 1997
- Lowe, Todd M.; Eddy, Sean R.
- Nucleic Acids Research, Vol. 25, Issue 5
Prodigal: prokaryotic gene recognition and translation initiation site identification
journal, March 2010
- Hyatt, Doug; Chen, Gwo-Liang; LoCascio, Philip F.
- BMC Bioinformatics, Vol. 11, Issue 1
The Genomes On Line Database (GOLD) v.2: a monitor of genome projects worldwide
journal, January 2006
- Liolios, K.
- Nucleic Acids Research, Vol. 34, Issue 90001
The L-Arabinan Utilization System of Geobacillus stearothermophilus
journal, April 2011
- Shulami, S.; Raz-Pasteur, A.; Tabachnikov, O.
- Journal of Bacteriology, Vol. 193, Issue 11
Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
journal, January 2001
- Krogh, Anders; Larsson, Björn; von Heijne, Gunnar
- Journal of Molecular Biology, Vol. 305, Issue 3
Genome sequencing in microfabricated high-density picolitre reactors
journal, July 2005
- Margulies, Marcel; Egholm, Michael; Altman, William E.
- Nature, Vol. 437, Issue 7057, p. 376-380
Base-Calling of Automated Sequencer Traces Using Phred. II. Error Probabilities
journal, March 1998
- Ewing, Brent; Green, Phil
- Genome Research, Vol. 8, Issue 3
Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp. nov. and Geobacillus uzenensis sp. nov. from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. th.
journal, March 2001
- Ivanov, M. V.; Lysenko, A. M.; Petrunyaka, V. V.
- International Journal of Systematic and Evolutionary Microbiology, Vol. 51, Issue 2
Thermus aquaticus gen. n. and sp. n., a Nonsporulating Extreme Thermophile
dataset, January 1969
- Brock, Thomas D.; Freeze, Hudson
- Plazi.org taxonomic treatments database
Genome sequencing in microfabricated high-density picolitre reactors
journal, July 2005
- Margulies, Marcel; Egholm, Michael; Altman, William E.
- Nature, Vol. 437, Issue 7057, p. 376-380
Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
journal, July 2012
- Mead, David A.; Lucas, Susan; Copeland, Alex
- Standards in Genomic Sciences, Vol. 6, Issue 3
Isolation and Characterization of Acidothermus cellulolyticus gen. nov., sp. nov., a New Genus of Thermophilic, Acidophilic, Cellulolytic Bacteria
journal, July 1986
- MOHAGHEGHI, A.; GROHMANN, K.; HIMMEL, M.
- International Journal of Systematic Bacteriology, Vol. 36, Issue 3, p. 435-443
MUSCLE: multiple sequence alignment with high accuracy and high throughput
journal, March 2004
- Edgar, R. C.
- Nucleic Acids Research, Vol. 32, Issue 5, p. 1792-1797
The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology
journal, January 2004
- Camon, E.
- Nucleic Acids Research, Vol. 32, Issue 90001
Three novel halotolerant and thermophilic Geobacillus strains from shallow marine vents
journal, January 2002
- Maugeri, Teresa L.; Gugliandolo, Concetta; Caccamo, Daniela
- Systematic and Applied Microbiology, Vol. 25, Issue 3
Thermophilic Protease-Producing Geobacillus from Buranga Hot Springs in Western Uganda
journal, August 2002
- Hawumba, Joseph F.; Theron, Jacques; Brözel, Volker S.
- Current Microbiology, Vol. 45, Issue 2
PHAST: A Fast Phage Search Tool
journal, June 2011
- Zhou, Y.; Liang, Y.; Lynch, K. H.
- Nucleic Acids Research, Vol. 39, Issue suppl
Consed: A Graphical Tool for Sequence Finishing
journal, March 1998
- Gordon, David; Abajian, Chris; Green, Phil
- Genome Research, Vol. 8, Issue 3
Complete Genome Sequence of Geobacillus strain Y4.1MC1, a Novel CO-Utilizing Geobacillus thermoglucosidasius Strain Isolated from Bath Hot Spring in Yellowstone National Park
journal, February 2015
- Brumm, Phillip; Land, Miriam L.; Hauser, Loren J.
- BioEnergy Research, Vol. 8, Issue 3
Sphingopyxis jiangsuensis sp. nov. Isolated From the Surface Water of the Yellow Sea
journal, June 2022
- Gao, Zeng-Yu; Xue, Hua-Peng; Wang, Lu
- Current Microbiology, Vol. 79, Issue 7
Influence of supplemental endoglucanase or xylanase on volatile fatty acid production from ruminant feed by ruminal in vitro cultures
journal, October 2005
- Tricarico, Juan M.; Dawson, Karl A.
- Archives of Animal Nutrition, Vol. 59, Issue 5
New xylanases to obtain modified eucalypt fibres with high-cellulose content
journal, October 2010
- Valls, Cristina; Gallardo, Oscar; Vidal, Teresa
- Bioresource Technology, Vol. 101, Issue 19
Application of a recN sequence similarity analysis to the identification of species within the bacterial genus Geobacillus
journal, May 2005
- Zeigler, Daniel R.
- International Journal of Systematic and Evolutionary Microbiology, Vol. 55, Issue 3
DNA–DNA hybridization values and their relationship to whole-genome sequence similarities
journal, January 2007
- Klappenbach, Joel A.; Goris, Johan; Vandamme, Peter
- International Journal of Systematic and Evolutionary Microbiology, Vol. 57, Issue 1
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
journal, November 2009
- Liolios, Konstantinos; Chen, I-Min A.; Mavromatis, Konstantinos
- Nucleic Acids Research, Vol. 38, Issue suppl_1
The Value of Basic Research: Discovery of Thermus aquaticus and Other Extreme Thermophiles
journal, August 1997
- Brock, Thomas D.
- Genetics, Vol. 146, Issue 4
Works referencing / citing this record:
CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes
journal, December 2018
- Benavides, Andres; Isaza, Juan Pablo; Niño-García, Juan Pablo
- BMC Genomics, Vol. 19, Issue S8
Unraveling the microbial and functional diversity of Coamo thermal spring in Puerto Rico using metagenomic library generation and shotgun sequencing
journal, March 2017
- Padilla-Del Valle, Ricky; Morales-Vale, Luis R.; Ríos-Velázquez, Carlos
- Genomics Data, Vol. 11
Insights into the Geobacillus stearothermophilus species based on phylogenomic principles
journal, June 2017
- Burgess, S. A.; Flint, S. H.; Lindsay, D.
- BMC Microbiology, Vol. 17, Issue 1
Complete Genome Sequence of Geobacillus thermoglucosidasius NCIMB 11955, the Progenitor of a Bioethanol Production Strain
journal, October 2016
- Sheng, Lili; Zhang, Ying; Minton, Nigel P.
- Genome Announcements, Vol. 4, Issue 5
Peculiarities and biotechnological potential of environmental adaptation by Geobacillus species
journal, October 2018
- Suzuki, Hirokazu
- Applied Microbiology and Biotechnology, Vol. 102, Issue 24
The Geobacillus Pan-Genome: Implications for the Evolution of the Genus
journal, May 2016
- Bezuidt, Oliver K.; Pierneef, Rian; Gomri, Amin M.
- Frontiers in Microbiology, Vol. 7
Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
journal, March 2018
- Lee, Li Sin; Goh, Kian Mau; Chan, Chia Sing
- MicrobiologyOpen, Vol. 7, Issue 6
CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes
journal, December 2018
- Benavides, Andres; Isaza, Juan Pablo; Niño-García, Juan Pablo
- BMC Genomics, Vol. 19, Issue S8
The Geobacillus Pan-Genome: Implications for the Evolution of the Genus
journal, May 2016
- Bezuidt, Oliver K.; Pierneef, Rian; Gomri, Amin M.
- Frontiers in Microbiology, Vol. 7
Microbial diversity of thermophiles with biomass deconstruction potential in a foliage‐rich hot spring
journal, March 2018
- Lee, Li Sin; Goh, Kian Mau; Chan, Chia Sing
- MicrobiologyOpen, Vol. 7, Issue 6
Erratum to: Complete genome sequences of Geobacillus sp. Y412MC52, a xylan-degrading strain isolated from obsidian hot spring in Yellowstone National Park
journal, January 2016
- Brumm, Phillip; Land, Miriam L.; Hauser, Loren J.
- Standards in Genomic Sciences, Vol. 11, Issue 1
Thermophile Lytic Enzyme Fusion Proteins that Target Clostridium perfringens
journal, November 2019
- Swift, Steven M.; Reid, Kevin P.; Donovan, David M.
- Antibiotics, Vol. 8, Issue 4