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Title: Data Exploration Toolkit for serial diffraction experiments

Journal Article · · Acta Crystallographica. Section D: Biological Crystallography (Online)

Ultrafast diffraction at X-ray free-electron lasers (XFELs) has the potential to yield new insights into important biological systems that produce radiation-sensitive crystals. An unavoidable feature of the `diffraction before destruction' nature of these experiments is that images are obtained from many distinct crystals and/or different regions of the same crystal. Combined with other sources of XFEL shot-to-shot variation, this introduces significant heterogeneity into the diffraction data, complicating processing and interpretation. To enable researchers to get the most from their collected data, a toolkit is presented that provides insights into the quality of, and the variation present in, serial crystallography data sets. These tools operate on the unmerged, partial intensity integration results from many individual crystals, and can be used on two levels: firstly to guide the experimental strategy during data collection, and secondly to help users make informed choices during data processing.

Research Organization:
SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States); Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Organization:
USDOE Office of Science (SC), Basic Energy Sciences (BES)
Grant/Contract Number:
AC02-76SF00515.; AC02-05CH11231
OSTI ID:
1213469
Alternate ID(s):
OSTI ID: 1512127
Journal Information:
Acta Crystallographica. Section D: Biological Crystallography (Online), Vol. 71, Issue 2; ISSN 1399-0047
Publisher:
International Union of CrystallographyCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 23 works
Citation information provided by
Web of Science

References (13)

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Cited By (9)

Climbing the Data Mountain: Processing of SFX Data book January 2018
Architecture of the synaptotagmin–SNARE machinery for neuronal exocytosis journal August 2015
Structures of the intermediates of Kok’s photosynthetic water oxidation clock journal November 2018
Fast and accurate data collection for macromolecular crystallography using the JUNGFRAU detector journal October 2018
Best practices for high data-rate macromolecular crystallography (HDRMX) journal January 2020
DatView : a graphical user interface for visualizing and querying large data sets in serial femtosecond crystallography journal October 2019
In meso in situ serial X-ray crystallography of soluble and membrane proteins at cryogenic temperatures journal January 2016
How best to use photons journal March 2019
Climbing the Data Mountain: Processing of SFX Data text January 2018

Figures / Tables (4)


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