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Title: Designer synthetic media for studying microbial-catalyzed biofuel production

Abstract

Background: The fermentation inhibition of yeast or bacteria by lignocellulose-derived degradation products, during hexose/pentose co-fermentation, is a major bottleneck for cost-effective lignocellulosic biorefineries. To engineer microbial strains for improved performance, it is critical to understand the mechanisms of inhibition that affect fermentative organisms in the presence of major components of a lignocellulosic hydrolysate. The development of a synthetic lignocellulosic hydrolysate (SH) media with a composition similar to the actual biomass hydrolysate will be an important advancement to facilitate these studies. In this work, we characterized the nutrients and plant-derived decomposition products present in AFEX™ pretreated corn stover hydrolysate (ACH). The SH was formulated based on the ACH composition and was further used to evaluate the inhibitory effects of various families of decomposition products during Saccharomyces cerevisiae 424A (LNH-ST) fermentation. Results: The ACH contained high levels of nitrogenous compounds, notably amides, pyrazines, and imidazoles. In contrast, a relatively low content of furans and aromatic and aliphatic acids were found in the ACH. Though most of the families of decomposition products were inhibitory to xylose fermentation, due to their abundance, the nitrogenous compounds showed the most inhibition. From these compounds, amides (products of the ammonolysis reaction) contributed the most to the reductionmore » of the fermentation performance. However, this result is associated to a concentration effect, as the corresponding carboxylic acids (products of hydrolysis) promoted greater inhibition when present at the same molar concentration as the amides. Due to its complexity, the formulated SH did not perfectly match the fermentation profile of the actual hydrolysate, especially the growth curve. However, the SH formulation was effective for studying the inhibitory effect of various compounds on yeast fermentation. Conclusions: The formulation of SHs is an important advancement for future multi-omics studies and for better understanding the mechanisms of fermentation inhibition in lignocellulosic hydrolysates. The SH formulated in this work was instrumental for defining the most important inhibitors in the ACH. Major AFEX decomposition products are less inhibitory to yeast fermentation than the products of dilute acid or steam explosion pretreatments; thus, ACH is readily fermentable by yeast without any detoxification.« less

Authors:
 [1];  [2];  [2];  [3];  [4];  [2];  [5];  [2];  [2]
  1. Biogas Inst. of Ministry of Agriculture, Chengdu (China)
  2. Michigan State Univ., East Lansing, MI (United States)
  3. Michigan State Univ., East Lansing, MI (United States); State Univ. of New Jersey, Piscataway, NJ (United States)
  4. Baylor Univ., Waco, TX (United States)
  5. Sichuan Univ., Chengdu (China)
Publication Date:
Research Org.:
Univ. of Wisconsin, Madison, WI (United States)
Sponsoring Org.:
USDOE Great Lakes Bioenergy Research Center (GLBRC); Foundation for Science and Technology, London, (United Kingdom); Chinese Scholarship Council
OSTI Identifier:
1204436
Grant/Contract Number:  
FC02-07ER64494; SFRH/BD/62517/2009; 2009101936
Resource Type:
Journal Article: Accepted Manuscript
Journal Name:
Biotechnology for Biofuels
Additional Journal Information:
Journal Volume: 8; Journal Issue: 1; Journal ID: ISSN 1754-6834
Publisher:
BioMed Central
Country of Publication:
United States
Language:
English
Subject:
09 BIOMASS FUELS; Synthetic hydrolysate; Lignocellulose; AFEX; Yeast fermentation inhibition; Amides inhibition; Carboxylic acids inhibition; Pretreatment decomposition products; Hydrolysate composition

Citation Formats

Tang, Xiaoyu, da Costa Sousa, Leonardo, Jin, Mingjie, Chundawat, Shishir, Chambliss, Charles, Lau, Ming W, Xiao, Zeyi, Dale, Bruce E, and Balan, Venkatesh. Designer synthetic media for studying microbial-catalyzed biofuel production. United States: N. p., 2015. Web. doi:10.1186/s13068-014-0179-6.
Tang, Xiaoyu, da Costa Sousa, Leonardo, Jin, Mingjie, Chundawat, Shishir, Chambliss, Charles, Lau, Ming W, Xiao, Zeyi, Dale, Bruce E, & Balan, Venkatesh. Designer synthetic media for studying microbial-catalyzed biofuel production. United States. doi:10.1186/s13068-014-0179-6.
Tang, Xiaoyu, da Costa Sousa, Leonardo, Jin, Mingjie, Chundawat, Shishir, Chambliss, Charles, Lau, Ming W, Xiao, Zeyi, Dale, Bruce E, and Balan, Venkatesh. Thu . "Designer synthetic media for studying microbial-catalyzed biofuel production". United States. doi:10.1186/s13068-014-0179-6. https://www.osti.gov/servlets/purl/1204436.
@article{osti_1204436,
title = {Designer synthetic media for studying microbial-catalyzed biofuel production},
author = {Tang, Xiaoyu and da Costa Sousa, Leonardo and Jin, Mingjie and Chundawat, Shishir and Chambliss, Charles and Lau, Ming W and Xiao, Zeyi and Dale, Bruce E and Balan, Venkatesh},
abstractNote = {Background: The fermentation inhibition of yeast or bacteria by lignocellulose-derived degradation products, during hexose/pentose co-fermentation, is a major bottleneck for cost-effective lignocellulosic biorefineries. To engineer microbial strains for improved performance, it is critical to understand the mechanisms of inhibition that affect fermentative organisms in the presence of major components of a lignocellulosic hydrolysate. The development of a synthetic lignocellulosic hydrolysate (SH) media with a composition similar to the actual biomass hydrolysate will be an important advancement to facilitate these studies. In this work, we characterized the nutrients and plant-derived decomposition products present in AFEX™ pretreated corn stover hydrolysate (ACH). The SH was formulated based on the ACH composition and was further used to evaluate the inhibitory effects of various families of decomposition products during Saccharomyces cerevisiae 424A (LNH-ST) fermentation. Results: The ACH contained high levels of nitrogenous compounds, notably amides, pyrazines, and imidazoles. In contrast, a relatively low content of furans and aromatic and aliphatic acids were found in the ACH. Though most of the families of decomposition products were inhibitory to xylose fermentation, due to their abundance, the nitrogenous compounds showed the most inhibition. From these compounds, amides (products of the ammonolysis reaction) contributed the most to the reduction of the fermentation performance. However, this result is associated to a concentration effect, as the corresponding carboxylic acids (products of hydrolysis) promoted greater inhibition when present at the same molar concentration as the amides. Due to its complexity, the formulated SH did not perfectly match the fermentation profile of the actual hydrolysate, especially the growth curve. However, the SH formulation was effective for studying the inhibitory effect of various compounds on yeast fermentation. Conclusions: The formulation of SHs is an important advancement for future multi-omics studies and for better understanding the mechanisms of fermentation inhibition in lignocellulosic hydrolysates. The SH formulated in this work was instrumental for defining the most important inhibitors in the ACH. Major AFEX decomposition products are less inhibitory to yeast fermentation than the products of dilute acid or steam explosion pretreatments; thus, ACH is readily fermentable by yeast without any detoxification.},
doi = {10.1186/s13068-014-0179-6},
journal = {Biotechnology for Biofuels},
number = 1,
volume = 8,
place = {United States},
year = {Thu Jan 01 00:00:00 EST 2015},
month = {Thu Jan 01 00:00:00 EST 2015}
}

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Works referenced in this record:

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