Variable C : N : P stoichiometry of dissolved organic matter cycling in the Community Earth System Model

Letscher, R. T.; Moore, J. K.; Teng, Y. -C.; Primeau, F.

doi:10.5194/bg-12-209-2015

Title: Variable C : N : P stoichiometry of dissolved organic matter cycling in the Community Earth System Model

Journal Article · Mon Jan 12 00:00:00 EST 2015 · Biogeosciences (Online)

DOI:https://doi.org/10.5194/bg-12-209-2015· OSTI ID:1198058

Letscher, R. T. ^[1]; Moore, J. K. ^[1]; Teng, Y. -C. ^[1]; Primeau, F. ^[1]

Univ. of California, Irvine, CA (United States)

Dissolved organic matter (DOM) plays an important role in the ocean's biological carbon pump by providing an advective/mixing pathway for ~ 20% of export production. DOM is known to have a stoichiometry depleted in nitrogen (N) and phosphorus (P) compared to the particulate organic matter pool, a fact that is often omitted from biogeochemical ocean general circulation models. However the variable C : N : P stoichiometry of DOM becomes important when quantifying carbon export from the upper ocean and linking the nutrient cycles of N and P with that of carbon. Here we utilize recent advances in DOM observational data coverage and offline tracer-modeling techniques to objectively constrain the variable production and remineralization rates of the DOM C : N : P pools in a simple biogeochemical-ocean model of DOM cycling. The optimized DOM cycling parameters are then incorporated within the Biogeochemical Elemental Cycling (BEC) component of the Community Earth System Model (CESM) and validated against the compilation of marine DOM observations. The optimized BEC simulation including variable DOM C : N : P cycling was found to better reproduce the observed DOM spatial gradients than simulations that used the canonical Redfield ratio. Global annual average export of dissolved organic C, N, and P below 100 m was found to be 2.28 Pg C yr^-1 (143 Tmol C yr^-1, 16.4 Tmol N yr^-1, and 1 Tmol P yr^-1, respectively, with an average export C : N : P stoichiometry of 225 : 19 : 1 for the semilabile (degradable) DOM pool. Dissolved organic carbon (DOC) export contributed ~ 25% of the combined organic C export to depths greater than 100 m.

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Sponsoring Organization:: USDOE Office of Science (SC), Biological and Environmental Research (BER); National Science Foundation (NSF)

Grant/Contract Number:: ER65358

OSTI ID:: 1198058

Journal Information:: Biogeosciences (Online), Journal Name: Biogeosciences (Online) Vol. 12 Journal Issue: 1; ISSN 1726-4189

Publisher:: Copernicus Publications, EGUCopyright Statement

Country of Publication:: Germany

Language:: English

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Cited by: 51 works

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References (48)

Regional variation in the particulate organic carbon to nitrogen ratio in the surface ocean: UPPER OCEAN C:N RATIO Martiny, A. C.; Vrugt, Jasper A.; Primeau, Francois W. Global Biogeochemical Cycles, Vol. 27, Issue 3 https://doi.org/10.1002/gbc.20061	journal	August 2013
The CCSM4 Ocean Component Danabasoglu, Gokhan; Bates, Susan C.; Briegleb, Bruce P. Journal of Climate, Vol. 25, Issue 5 https://doi.org/10.1175/JCLI-D-11-00091.1	journal	March 2012
The Community Climate System Model Version 4 Gent, Peter R.; Danabasoglu, Gokhan; Donner, Leo J. Journal of Climate, Vol. 24, Issue 19 https://doi.org/10.1175/2011JCLI4083.1	journal	October 2011
GFDL’s ESM2 Global Coupled Climate–Carbon Earth System Models. Part II: Carbon System Formulation and Baseline Simulation Characteristics Dunne, John P.; John, Jasmin G.; Shevliakova, Elena Journal of Climate, Vol. 26, Issue 7 https://doi.org/10.1175/JCLI-D-12-00150.1	journal	April 2013
Dissolved organic nitrogen in the global surface ocean: Distribution and fate: DISSOLVED ORGANIC NITROGEN IN THE GLOBAL SURFACE OCEAN Letscher, Robert T.; Hansell, Dennis A.; Carlson, Craig A. Global Biogeochemical Cycles, Vol. 27, Issue 1 https://doi.org/10.1029/2012GB004449	journal	February 2013
Optimization and sensitivity study of a biogeochemistry ocean model using an implicit solver and in situ phosphate data: OPTIMIZATION AND SENSITIVITY STUDY Kwon, Eun Young; Primeau, Francois Global Biogeochemical Cycles, Vol. 20, Issue 4 https://doi.org/10.1029/2005GB002631	journal	November 2006
Inorganic nutrient limitation of oceanic bacterioplankton Rivkin, Richard B.; Anderson, M. Robin Limnology and Oceanography, Vol. 42, Issue 4 https://doi.org/10.4319/lo.1997.42.4.0730	journal	June 1997
Recalcitrant Dissolved Organic Carbon Fractions Hansell, Dennis A. Annual Review of Marine Science, Vol. 5, Issue 1 https://doi.org/10.1146/annurev-marine-120710-100757	journal	January 2013
Phytoplankton taxon-specific orthophosphate (Pi) and ATP utilization in the western subtropical North Atlantic Casey, Jr; Lomas, Mw; Michelou, Vk Aquatic Microbial Ecology, Vol. 58 https://doi.org/10.3354/ame01348	journal	December 2009
Net removal of major marine dissolved organic carbon fractions in the subsurface ocean: REMOVAL OF EXPORTED DOC Hansell, Dennis A.; Carlson, Craig A.; Schlitzer, Reiner Global Biogeochemical Cycles, Vol. 26, Issue 1 https://doi.org/10.1029/2011GB004069	journal	February 2012
Alkaline phosphatase activity in the phytoplankton communities of Monterey Bay and San Francisco Bay Nicholson, David; Dyhrman, Sonya; Chavez, Francisco Limnology and Oceanography, Vol. 51, Issue 2 https://doi.org/10.4319/lo.2006.51.2.0874	journal	March 2006
Interactions among dissolved organic carbon, microbial processes, and community structure in the mesopelagic zone of the northwestern Sargasso Sea Carlson, Craig A.; Giovannoni, Stephen J.; Hansell, Dennis A. Limnology and Oceanography, Vol. 49, Issue 4 https://doi.org/10.4319/lo.2004.49.4.1073	journal	July 2004
Aldoses in various size fractions of marine organic matter: Implications for carbon cycling Skoog, Annelie; Benner, Ronald Limnology and Oceanography, Vol. 42, Issue 8 https://doi.org/10.4319/lo.1997.42.8.1803	journal	December 1997
Preferential remineralization of dissolved organic phosphorus and non-Redfield DOM dynamics in the global ocean: Impacts on marine productivity, nitrogen fixation, and carbon export Letscher, Robert T.; Moore, J. Keith Global Biogeochemical Cycles, Vol. 29, Issue 3 https://doi.org/10.1002/2014GB004904	journal	March 2015
Dissolved Organic Matter in the Ocean: A Controversy Stimulates New Insights Hansell, Dennis; Carlson, Craig; Repeta, Daniel Oceanography, Vol. 22, Issue 4 https://doi.org/10.5670/oceanog.2009.109	journal	December 2009
Redfield ratios of remineralization determined by nutrient data analysis Anderson, Laurence A.; Sarmiento, Jorge L. Global Biogeochemical Cycles, Vol. 8, Issue 1 https://doi.org/10.1029/93GB03318	journal	March 1994
Seasonal dynamics of SAR11 populations in the euphotic and mesopelagic zones of the northwestern Sargasso Sea Carlson, Craig A.; Morris, Robert; Parsons, Rachel The ISME Journal, Vol. 3, Issue 3 https://doi.org/10.1038/ismej.2008.117	journal	December 2008
Upper ocean ecosystem dynamics and iron cycling in a global three-dimensional model: GLOBAL ECOSYSTEM-BIOGEOCHEMICAL MODEL Moore, J. Keith; Doney, Scott C.; Lindsay, Keith Global Biogeochemical Cycles, Vol. 18, Issue 4 https://doi.org/10.1029/2004GB002220	journal	December 2004
Accelerated simulation of passive tracers in ocean circulation models Khatiwala, Samar; Visbeck, Martin; Cane, Mark A. Ocean Modelling, Vol. 9, Issue 1 https://doi.org/10.1016/j.ocemod.2004.04.002	journal	January 2005
Dissolved inorganic and organic phosphorus uptake in Trichodesmium and the microbial community: The importance of phosphorus ester in the Sargasso Sea Orchard, Elizabeth D.; Ammerman, James W.; Lomas, Michael W. Limnology and Oceanography, Vol. 55, Issue 3 https://doi.org/10.4319/lo.2010.55.3.1390	journal	May 2010
Phosphorus-limited bacterioplankton growth in the Sargasso Sea Cotner, Jb; Ammerman, Jw; Peele, Er Aquatic Microbial Ecology, Vol. 13 https://doi.org/10.3354/ame013141	journal	January 1997
Hybrid scheduling for the parallel solution of linear systems Amestoy, Patrick R.; Guermouche, Abdou; L’Excellent, Jean-Yves Parallel Computing, Vol. 32, Issue 2 https://doi.org/10.1016/j.parco.2005.07.004	journal	February 2006
Microbial structuring of marine ecosystems Azam, Farooq; Malfatti, Francesca Nature Reviews Microbiology, Vol. 5, Issue 10 https://doi.org/10.1038/nrmicro1747	journal	October 2007
Bioavailability of dissolved organic phosphorus in the euphotic zone at Station ALOHA, North Pacific Subtropical Gyre Björkman, Karin M.; Karl, David M. Limnology and Oceanography, Vol. 48, Issue 3 https://doi.org/10.4319/lo.2003.48.3.1049	journal	May 2003
Systematic removal of neutral sugars within dissolved organic matter across ocean basins: SYSTEMATIC REMOVAL OF NEUTRAL SUGARS Goldberg, Stuart J.; Carlson, Craig A.; Brzezinski, Mark Geophysical Research Letters, Vol. 38, Issue 17 https://doi.org/10.1029/2011GL048620	journal	September 2011
Phosphate monoesterase and diesterase activities in the North and South Pacific Ocean Sato, M.; Sakuraba, R.; Hashihama, F. Biogeosciences, Vol. 10, Issue 11 https://doi.org/10.5194/bg-10-7677-2013	journal	January 2013
Seasonality and vertical structure of microbial communities in an ocean gyre Treusch, Alexander H.; Vergin, Kevin L.; Finlay, Liam A. The ISME Journal, Vol. 3, Issue 10 https://doi.org/10.1038/ismej.2009.60	journal	June 2009
Responses of bacterioplankton and phytoplankton to organic carbon and inorganic nutrient additions in contrasting oceanic ecosystems Caron, Da; Lim, El; Sanders, Rw Aquatic Microbial Ecology, Vol. 22 https://doi.org/10.3354/ame022175	journal	January 2000
An offline implicit solver for simulating prebomb radiocarbon Bardin, Ann; Primeau, François; Lindsay, Keith Ocean Modelling, Vol. 73 https://doi.org/10.1016/j.ocemod.2013.09.008	journal	January 2014
Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior DeLong, E. F. Science, Vol. 311, Issue 5760 https://doi.org/10.1126/science.1120250	journal	January 2006
Strong latitudinal patterns in the elemental ratios of marine plankton and organic matter Martiny, Adam C.; Pham, Chau T. A.; Primeau, Francois W. Nature Geoscience, Vol. 6, Issue 4 https://doi.org/10.1038/ngeo1757	journal	March 2013
Efficient export of carbon to the deep ocean through dissolved organic matter Hopkinson, Charles S.; Vallino, Joseph J. Nature, Vol. 433, Issue 7022 https://doi.org/10.1038/nature03191	journal	January 2005
Changes in biogenic carbon flow in response to sea surface warming Wohlers, Julia; Engel, Anja; Zöllner, Eckart Proceedings of the National Academy of Sciences, Vol. 106, Issue 17 https://doi.org/10.1073/pnas.0812743106	journal	April 2009
A Fully Asynchronous Multifrontal Solver Using Distributed Dynamic Scheduling Amestoy, Patrick R.; Duff, Iain S.; L'Excellent, Jean-Yves SIAM Journal on Matrix Analysis and Applications, Vol. 23, Issue 1 https://doi.org/10.1137/S0895479899358194	journal	January 2001
16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the Green Non-Sulfur bacteria. Giovannoni, S. J.; Rappe, M. S.; Vergin, K. L. Proceedings of the National Academy of Sciences, Vol. 93, Issue 15 https://doi.org/10.1073/pnas.93.15.7979	journal	July 1996
Phosphorus dynamics of the tropical and subtropical north Atlantic: Trichodesmium spp. versus bulk plankton Sohm, Ja; Capone, Dg Marine Ecology Progress Series, Vol. 317 https://doi.org/10.3354/meps317021	journal	July 2006
Shifts in biogenic carbon flow from particulate to dissolved forms under high carbon dioxide and warm ocean conditions: THE ENHANCED DOC PRODUCTION IN A FUTURE OCEAN Kim, Ja-Myung; Lee, Kitack; Shin, Kyungsoon Geophysical Research Letters, Vol. 38, Issue 8 https://doi.org/10.1029/2011GL047346	journal	April 2011
Production and Removal Processes Carlson, Craig A. Biogeochemistry of Marine Dissolved Organic Matter https://doi.org/10.1016/B978-012323841-2/50006-3	book	January 2002
Presence and regulation of alkaline phosphatase activity in eukaryotic phytoplankton from the coastal ocean: Implications for dissolved organic phosphorus remineralization Dyhrman, Sonya T.; Ruttenberg, Kathleen C. Limnology and Oceanography, Vol. 51, Issue 3 https://doi.org/10.4319/lo.2006.51.3.1381	journal	May 2006
Basin-scale patterns in the abundance of SAR11 subclades, marine Actinobacteria (OM1), members of the Roseobacter clade and OCS116 in the South Atlantic: Bacterioplankton communities in the South Atlantic Morris, Robert M.; Frazar, Christian D.; Carlson, Craig A. Environmental Microbiology, Vol. 14, Issue 5 https://doi.org/10.1111/j.1462-2920.2011.02694.x	journal	January 2012
Distributions of TOP, TON and TOC in the North Pacific subtropical gyre: Implications for nutrient supply in the surface ocean and remineralization in the upper thermocline Abell, Jeffrey; Emerson, Steve; Renaud, Paul Journal of Marine Research, Vol. 58, Issue 2 https://doi.org/10.1357/002224000321511142	journal	March 2000
Two Chemically Distinct Pools of Organic Nitrogen Accumulate in the Ocean Aluwihare, L. I. Science, Vol. 308, Issue 5724 https://doi.org/10.1126/science.1108925	journal	May 2005
Biogeochemistry of total organic carbon and nitrogen in the Sargasso Sea: control by convective overturn Hansell, Dennis A.; Carlson, Craig A. Deep Sea Research Part II: Topical Studies in Oceanography, Vol. 48, Issue 8-9 https://doi.org/10.1016/S0967-0645(00)00153-3	journal	January 2001
Comparative metaproteomics reveals ocean-scale shifts in microbial nutrient utilization and energy transduction Morris, Robert M.; Nunn, Brook L.; Frazar, Christian The ISME Journal, Vol. 4, Issue 5 https://doi.org/10.1038/ismej.2010.4	journal	February 2010
A generalized model of pelagic biogeochemistry for the global ocean ecosystem. Part I: Theory Vichi, M.; Pinardi, N.; Masina, S. Journal of Marine Systems, Vol. 64, Issue 1-4 https://doi.org/10.1016/j.jmarsys.2006.03.006	journal	January 2007
Dissolved organic carbon, nitrogen and phosphorus in the N-E Atlantic and the N-W Mediterranean with particular reference to non-refractory fractions and degradation Aminot, Alain; Kérouel, Roger Deep Sea Research Part I: Oceanographic Research Papers, Vol. 51, Issue 12 https://doi.org/10.1016/j.dsr.2004.07.016	journal	December 2004
Dissolved organic nitrogen dynamics in the Arctic Ocean Letscher, Robert T.; Hansell, Dennis A.; Kadko, David Marine Chemistry, Vol. 148 https://doi.org/10.1016/j.marchem.2012.10.002	journal	January 2013
Sargasso Sea phosphorus biogeochemistry: an important role for dissolved organic phosphorus (DOP) Lomas, M. W.; Burke, A. L.; Lomas, D. A. Biogeosciences, Vol. 7, Issue 2 https://doi.org/10.5194/bg-7-695-2010	journal	January 2010

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