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Title: Crystal structure of an efficacious gonococcal adherence inhibitor: An enolase from Lactobacillus gasseri

Authors:
; ; ; ;  [1]
  1. (MSU)
Publication Date:
Research Org.:
Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Sponsoring Org.:
UNIVERSITYDOE - BASIC ENERGY SCIENCES
OSTI Identifier:
1140242
Resource Type:
Journal Article
Resource Relation:
Journal Name: FEBS Lett.; Journal Volume: 588; Journal Issue: (14) ; 06, 2014
Country of Publication:
United States
Language:
ENGLISH

Citation Formats

Raghunathan, Kannan, Harris, Paul T., Spurbeck, Rachel R., Arvidson, Cindy G., and Arvidson, Dennis N. Crystal structure of an efficacious gonococcal adherence inhibitor: An enolase from Lactobacillus gasseri. United States: N. p., 2014. Web. doi:10.1016/j.febslet.2014.05.020.
Raghunathan, Kannan, Harris, Paul T., Spurbeck, Rachel R., Arvidson, Cindy G., & Arvidson, Dennis N. Crystal structure of an efficacious gonococcal adherence inhibitor: An enolase from Lactobacillus gasseri. United States. doi:10.1016/j.febslet.2014.05.020.
Raghunathan, Kannan, Harris, Paul T., Spurbeck, Rachel R., Arvidson, Cindy G., and Arvidson, Dennis N. Mon . "Crystal structure of an efficacious gonococcal adherence inhibitor: An enolase from Lactobacillus gasseri". United States. doi:10.1016/j.febslet.2014.05.020.
@article{osti_1140242,
title = {Crystal structure of an efficacious gonococcal adherence inhibitor: An enolase from Lactobacillus gasseri},
author = {Raghunathan, Kannan and Harris, Paul T. and Spurbeck, Rachel R. and Arvidson, Cindy G. and Arvidson, Dennis N.},
abstractNote = {},
doi = {10.1016/j.febslet.2014.05.020},
journal = {FEBS Lett.},
number = (14) ; 06, 2014,
volume = 588,
place = {United States},
year = {Mon Aug 25 00:00:00 EDT 2014},
month = {Mon Aug 25 00:00:00 EDT 2014}
}
  • Recombinant Lactobacillus jensenii enolase fused to a C-terminal noncleavable His tag was expressed in Escherichia coli, purified and crystallized by sitting-drop vapor diffusion. A complete data set was collected to 3.25 {angstrom} resolution. The crystals belonged to space group I4, with unit-cell parameters a = b = 145.31, c = 99.79 {angstrom}. There were two protein subunits in the asymmetric unit, which gave a Matthews coefficient V{sub M} of 2.8 {angstrom}{sup 3} Da{sup -1}, corresponding to 55.2% solvent content.
  • Enolase is a dimeric metal-activated metalloenzyme which uses two magnesium ions per subunit: the strongly bound conformational ion and the catalytic ion that binds to the enzyme-substrate complex inducing catalysis. The crystal structure of the human neuronal enolase-Mg{sub 2}F{sub 2}P{sub i} complex (enolase fluoride/phosphate inhibitory complex, EFPIC) determined at 1.36 {angstrom} resolution shows that the combination of anions effectively mimics an intermediate state in catalysis. The phosphate ion binds in the same site as the phosphate group of the substrate/product, 2-phospho-d-glycerate/phosphoenolpyruvate, and induces binding of the catalytic Mg{sup 2+} ion. One fluoride ion bridges the structural and catalytic magnesium ionsmore » while the other interacts with the structural magnesium ion and the ammonio groups of Lys 342 and Lys 393. These fluoride ion positions correspond closely to the positions of the oxygen atoms of the substrate's carboxylate moiety. To relate structural changes resulting from fluoride, phosphate, and magnesium ions binding to those that are induced by phosphate and magnesium ions alone, we also determined the structure of the human neuronal enolase-Mg{sub 2}Pi complex (enolase phosphate inhibitory complex, EPIC) at 1.92 {angstrom} resolution. It shows the closed conformation in one subunit and a mixture of open and semiclosed conformations in the other. The EPFIC dimer is essentially symmetric while the EPIC dimer is asymmetric. Isothermal titration calorimetry data confirmed binding of four fluoride ions per dimer and yielded K{sub b} values of 7.5 x 10{sup 5} {+-} 1.3 x 10{sup 5}, 1.2 x 10{sup 5} {+-} 0.2 x 10{sup 5}, 8.6 x 10{sup 4} {+-} 1.6 x 10{sup 4}, and 1.6 x 10{sup 4} {+-} 0.7 x 10{sup 4} M{sup -1}. The different binding constants indicate negative cooperativity between the subunits; the asymmetry of EPIC supports such an interpretation.« less
  • Of 113 lactobacilli isolated from radurized (5 kGy) minced meat, 7 Lactobacillus sake strains, 1 L. curvatus strain, and 1 L. farciminis strain were used for radiation resistance studies in a semisynthetic substrate (i.e., modified MRS broth). Five reference Lactobacillus spp. one Staphylococcus aureus strain, and one Salmonella typhimurium strain were used for comparative purposes. All L. sake isolates exhibited the phenomenon of being more resistant to gamma-irradiation in the exponential (log) phase than in the stationary phase of their growth cycles by a factor of 28%. Four reference strains also exhibited this phenomenon, with L. sake (DSM 20017) showingmore » a 68% increase in resistance in the log phase over the stationary phase. This phenomenon was not common to all bacteria tested and is not common to all strains with high radiation resistance. Four L. sake isolates and three reference strains were used in radiation sensitivity testing in a natural food system (i.e., meat). The bacteria were irradiated in minced meat and packaged under four different conditions (air, vacuum, CO/sub 2/, and N/sub 2/). Organisms exhibited the highest death rate (lowest D/sub 10/ values (doses required to reduce the logarithm of the bacterial population by 1) under CO/sub 2/ packaging conditions, but resistance to irradiation was increased under N/sub 2/. The D/sup 10/ values of the isolates were generally greater than those of the reference strains. The D/sup 10/ values were also higher (approximately two times) in meat than in a semisynthetic growth medium.« less
  • The second crystal structure of a parasite protein preferentially enriched in the brain cyst of T. gondii has been solved at 2.75 Å resolution. Bradyzoite enolase 1 is reported to have differential functions as a glycolytic enzyme and a transcriptional regulator in bradyzoites. In addition to catalyzing a central step in glycolysis, enolase assumes a remarkably diverse set of secondary functions in different organisms, including transcription regulation as documented for the oncogene c-Myc promoter-binding protein 1. The apicomplexan parasite Toxoplasma gondii differentially expresses two nuclear-localized, plant-like enolases: enolase 1 (TgENO1) in the latent bradyzoite cyst stage and enolase 2 (TgENO2)more » in the rapidly replicative tachyzoite stage. A 2.75 Å resolution crystal structure of bradyzoite enolase 1, the second structure to be reported of a bradyzoite-specific protein in Toxoplasma, captures an open conformational state and reveals that distinctive plant-like insertions are located on surface loops. The enolase 1 structure reveals that a unique residue, Glu164, in catalytic loop 2 may account for the lower activity of this cyst-stage isozyme. Recombinant TgENO1 specifically binds to a TTTTCT DNA motif present in the cyst matrix antigen 1 (TgMAG1) gene promoter as demonstrated by gel retardation. Furthermore, direct physical interactions of both nuclear TgENO1 and TgENO2 with the TgMAG1 gene promoter are demonstrated in vivo using chromatin immunoprecipitation (ChIP) assays. Structural and biochemical studies reveal that T. gondii enolase functions are multifaceted, including the coordination of gene regulation in parasitic stage development. Enolase 1 provides a potential lead in the design of drugs against Toxoplasma brain cysts.« less
  • In addition to catalyzing a central step in glycolysis, enolase assumes a remarkably diverse set of secondary functions in different organisms, including transcription regulation as documented for the oncogene c-Myc promoter-binding protein 1. The apicomplexan parasite Toxoplasma gondii differentially expresses two nuclear-localized, plant-like enolases: enolase 1 (TgENO1) in the latent bradyzoite cyst stage and enolase 2 (TgENO2) in the rapidly replicative tachyzoite stage. A 2.75 Å resolution crystal structure of bradyzoite enolase 1, the second structure to be reported of a bradyzoite-specific protein inToxoplasma, captures an open conformational state and reveals that distinctive plant-like insertions are located on surface loops.more » The enolase 1 structure reveals that a unique residue, Glu164, in catalytic loop 2 may account for the lower activity of this cyst-stage isozyme. Recombinant TgENO1 specifically binds to a TTTTCT DNA motif present in the cyst matrix antigen 1 (TgMAG1) gene promoter as demonstrated by gel retardation. Furthermore, direct physical interactions of both nuclear TgENO1 and TgENO2 with the TgMAG1 gene promoter are demonstrated n vivo using chromatin immunoprecipitation (ChIP) assays. Structural and biochemical studies reveal that T. gondii enolase functions are multifaceted, including the coordination of gene regulation in parasitic stage development. Lastly, enolase 1 provides a potential lead in the design of drugs against Toxoplasma brain cysts.« less