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Title: High-throughput Isolation and Characterization of Untagged Membrane Protein Complexes: Outer Membrane Complexes of Desulfovibrio vulgaris

Journal Article · · Journal of Proteome Research
DOI:https://doi.org/10.1021/pr300548d· OSTI ID:1123342
 [1];  [2];  [1];  [1];  [2];  [2];  [2];  [3];  [1];  [1];  [1];  [4];  [5];  [6];  [2];  [1];  [1]
  1. Lawrence Berkeley National Laboratory, Berkeley, California, United States
  2. University of California, San Francisco, California, United States
  3. Lawrence Berkeley National Laboratory, Berkeley, California, United States, University of California, San Francisco, California, United States
  4. University of California, Berkeley, California, United States
  5. Lawrence Berkeley National Laboratory, Berkeley, California, United States, University of California, Berkeley, California, United States
  6. University of Tennessee, Knoxville, Tennessee, United States

Sponsoring Organization:
USDOE
OSTI ID:
1123342
Journal Information:
Journal of Proteome Research, Journal Name: Journal of Proteome Research Vol. 11 Journal Issue: 12; ISSN 1535-3893
Publisher:
American Chemical SocietyCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 17 works
Citation information provided by
Web of Science

References (58)

Characterization of Multiprotein Complexes of the Borrelia burgdorferi Outer Membrane Vesicles journal September 2011
A proteomic view ofDesulfovibrio vulgaris metabolism as determined by liquid chromatography coupled with tandem mass spectrometry journal August 2006
MicrobesOnline: an integrated portal for comparative and functional genomics journal November 2009
Comparison of Two-Dimensional Fractionation Techniques for Shotgun Proteomics journal August 2008
Membrane proteins and membrane proteomics journal October 2008
Proteome of the Escherichia coli envelope and technological challenges in membrane proteome analysis journal September 2008
Identification of Neisseria meningitidis Outer Membrane Vesicle Complexes Using 2-D High Resolution Clear Native/SDS-PAGE journal December 2009
Analysis of Molecular Masses and Oligomeric States of Protein Complexes by Blue Native Electrophoresis and Isolation of Membrane Protein Complexes by Two-Dimensional Native Electrophoresis journal March 1994
Structure and function of bacterial outer membrane proteins: barrels in a nutshell journal July 2000
Cross-linking Measurements of In Vivo Protein Complex Topologies journal June 2011
TonB-dependent trans-envelope signalling: the exception or the rule? journal August 2005
Functional Analysis of the Protein Machinery Required for Transport of Lipopolysaccharide to the Outer Membrane of Escherichia coli journal April 2008
Quantitative, Multiplexed Assays for Low Abundance Proteins in Plasma by Targeted Mass Spectrometry and Stable Isotope Dilution journal October 2007
Function of Periplasmic Hydrogenases in the Sulfate-Reducing Bacterium Desulfovibrio vulgaris Hildenborough journal June 2007
Fishing new proteins in the twilight zone of genomes: The test case of outer membrane proteins in Escherichia coli K12, Escherichia coli O157:H7, and other Gram-negative bacteria journal June 2003
Mechanism of Assembly of the Outer Membrane of Salmonella typhimurium journal June 1972
Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation journal March 2009
Towards a Rigorous Network of Protein-Protein Interactions of the Model Sulfate Reducer Desulfovibrio vulgaris Hildenborough journal June 2011
Effect of the Deletion of qmoABC and the Promoter-Distal Gene Encoding a Hypothetical Protein on Sulfate Reduction in Desulfovibrio vulgaris Hildenborough journal June 2010
Systematic Analysis of Native Membrane Protein Complexes in Escherichia coli journal April 2011
Uranium Reduction journal October 2006
Identification of a protein complex that assembles lipopolysaccharide in the outer membrane of Escherichia coli journal July 2006
Structure of TolC, the outer membrane component of the bacterial type I efflux system, derived from two-dimensional crystals journal January 1997
Crystal Structure of the Long-Chain Fatty Acid Transporter FadL journal June 2004
A protease complex in the Escherichia coli plasma membrane: HflKC (HflA) forms a complex with FtsH (HflB), regulating its proteolytic activity against SecY. journal November 1996
The Complete Genome Sequence of Escherichia coli K-12 journal September 1997
Hydrogenases in Desulfovibrio vulgaris Hildenborough: structural and physiologic characterisation of the membrane-bound [NiFeSe] hydrogenase journal September 2005
The tetratricopeptide repeat: a structural motif mediating protein-protein interactions journal October 1999
The Paragon Algorithm, a Next Generation Search Engine That Uses Sequence Temperature Values and Feature Probabilities to Identify Peptides from Tandem Mass Spectra journal May 2007
The Regulated Outer Membrane Protein Omp21 from Comamonas acidovorans Is Identified as a Member of a New Family of Eight-Stranded β-Sheet Proteins by Its Sequence and Properties journal August 1998
Reconstitution of Outer Membrane Protein Assembly from Purified Components journal April 2010
Optimal posttranslational translocation of the precursor of PhoE protein across Escherichia coli membrane vesicles requires both ATP and the protonmotive force journal June 1987
Combining blue native polyacrylamide gel electrophoresis with liquid chromatography tandem mass spectrometry as an effective strategy for analyzing potential membrane protein complexes of Mycobacterium bovis bacillus Calmette-Guérin journal January 2011
Structure and functional mechanism of porins journal October 1996
Orthogonality of Separation in Two-Dimensional Liquid Chromatography journal October 2005
Proteomic analysis of succinate dehydrogenase and ubiquinol-cytochrome c reductase (Complex II and III) isolated by immunoprecipitation from bovine and mouse heart mitochondria journal February 2006
TPR proteins: the versatile helix journal December 2003
High throughput two-dimensional blue-native electrophoresis: A tool for functional proteomics of mitochondria and signaling complexes journal August 2002
Study of nitrate stress in Desulfovibrio vulgaris Hildenborough using iTRAQ proteomics journal May 2006
Basic local alignment search tool journal October 1990
The genome sequence of the anaerobic, sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough journal April 2004
Lipoprotein trafficking in Escherichia coli journal June 2004
Enzymatic reduction of chromate: comparative studies using sulfate-reducing bacteria journal January 2001
Transmembrane passage of hydrophobic compounds through a protein channel wall journal February 2009
A single amino acid determinant of the membrane localization of lipoproteins in E. coli journal May 1988
Proteomics of Integral Membrane ProteinsTheory and Application journal August 2007
Global Functional Atlas of Escherichia coli Encompassing Previously Uncharacterized Proteins journal April 2009
The ecology and biotechnology of sulphate-reducing bacteria journal May 2008
Peptidoglycan Recognition by Pal, an Outer Membrane Lipoprotein , journal February 2006
Complexomics Study of Two Helicobacter pylori Strains of Two Pathological Origins journal December 2010
Blue native PAGE journal June 2006
High-resolution structure of the OmpA membrane domain journal April 2000
Evidence-Based Annotation of Transcripts and Proteins in the Sulfate-Reducing Bacterium Desulfovibrio vulgaris Hildenborough journal August 2011
The EcoCyc Database journal January 2002
Uranium Reduction by Desulfovibrio desulfuricans Strain G20 and a Cytochrome c3 Mutant journal June 2002
The WEKA data mining software: an update journal November 2009
The [NiFeSe] hydrogenase from Desulfovibrio vulgaris Hildenborough is a bacterial lipoprotein lacking a typical lipoprotein signal peptide journal June 2007
Complexome of Escherichia coli Envelope Proteins under Normal Physiological Conditions journal June 2010