Complete genome sequence of Serratia plymuthica strain AS12

Journal Article · Sun Jan 01 00:00:00 EST 2012 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.2705996· OSTI ID:1049850

Neupane, Saraswoti ^[1]; Finlay, Roger D ^[1]; Alstrom, Sadhna ^[1]; Goodwin, Lynne A ^[2]; Kyrpides, Nikos C ^[3]; Lucas, Susan ^[3]; Lapidus, Alla L ^[3]; Bruce, David ^[2]; Pitluck, Sam ^[3]; Peters, Lin ^[3]; Ovchinnikova, Galina ^[3]; Chertkov, Olga ^[2]; Han, James ^[3]; Han, Cliff ^[2]; Tapia, Roxanne ^[2]; Detter, J Chris ^[3]; Land, Miriam L ^[4]; Hauser, Loren John ^[4]; Cheng, Jan-Fang ^[3]; Ivanova, N ^[3] ; Pagani, Ioanna ^[3]; Klenk, Hans-Peter ^[5]; Woyke, Tanja ^[3]; Hogberg, Nils ^[1]

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1. Uppsala University, Uppsala, Sweden
2. Los Alamos National Laboratory (LANL)
3. U.S. Department of Energy, Joint Genome Institute
4. ORNL
5. DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany

A plant associated member of the family Enterobacteriaceae, Serratia plymuthica strain AS12 was isolated from rapeseed roots. It is of scientific interest due to its plant growth promoting and plant pathogen inhibiting ability. The genome of S. plymuthica AS12 comprises a 5,443,009 bp long circular chromosome, which consists of 4,952 protein-coding genes, 87 tRNA genes and 7 rRNA operons. This genome was sequenced within the 2010 DOE-JGI Community Sequencing Program (CSP2010) as part of the project entitled 'Genomics of four rapeseed plant growth promoting bacteria with antagonistic effect on plant pathogens'.

• Research Organization: Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
• Sponsoring Organization: Work for Others (WFO)
• DOE Contract Number: DE-AC05-00OR22725
• OSTI ID: 1049850
• Journal Information: Standards in Genomic Sciences, Vol. 6, Issue 2; ISSN 1944-3277
• Country of Publication: United States
• Language: English

Related Subjects

59 BASIC BIOLOGICAL SCIENCES
60 APPLIED LIFE SCIENCES
BACTERIA
BRASSICA
GENES
PATHOGENS
PLANT GROWTH
SERRATIA
STRAINS
Facultative anaerobe
gram-negative
motile
non-sporulating
mesophilic
chemoorganotrophic
agriculture
Enterobacteriaceae
CSP 2010