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Title: Complete Genome Sequences of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae

Abstract

Two members of the family Flavobacteriaceae were isolated from deep sea sediments in Japan using artificial seawater and cellulose, xylan and chitin as sole carbon and energy source. Here, we present the finished genome sequence of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4 which both encode for putatively novel enzymes involved in cellulose, hemicellulose and chitin degradation.

Authors:
 [1];  [2];  [2];  [3];  [2];  [3];  [2];  [4];  [3];  [3];  [3];  [3];  [2];  [2];  [3];  [1];  [1];  [5];  [5];  [1]
  1. Technische Universitat Hamburg-Harburg (Hamburg University of Technology)
  2. Los Alamos National Laboratory (LANL)
  3. U.S. Department of Energy, Joint Genome Institute
  4. ORNL
  5. Japan Agency for Marine-Earth Science and Technology (JAMSTEC)
Publication Date:
Research Org.:
Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
Sponsoring Org.:
USDOE Office of Science (SC)
OSTI Identifier:
1047609
DOE Contract Number:  
DE-AC05-00OR22725
Resource Type:
Journal Article
Journal Name:
Journal of Bacteriology
Additional Journal Information:
Journal Name: Journal of Bacteriology; Journal ID: ISSN 0021-9193
Country of Publication:
United States
Language:
English
Subject:
59 BASIC BIOLOGICAL SCIENCES; 60 APPLIED LIFE SCIENCES; CARBON; CELLULOSE; CHITIN; ENERGY SOURCES; ENZYMES; HEMICELLULOSE; JAPAN; SEAWATER; SEDIMENTS; XYLANS

Citation Formats

Klippel, Dr Barbara, Bruce, David, Davenport, Karen W, Detter, J C, Goodwin, Lynne A, Han, James, Han, Shunsheng, Land, Miriam L, Nolan, Matt, Ovchinnikova, Galina, Pennacchio, Len, Pitluck, Sam, Tapia, Roxanne, Walston Davenport, Karen, Woyke, Tanja, Wiebusch, Sigrid, Basner, Alexander, Abe, Fumiyoshi, Horikoshi, Koki, and Antranikian, Garabed. Complete Genome Sequences of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae. United States: N. p., 2011. Web.
Klippel, Dr Barbara, Bruce, David, Davenport, Karen W, Detter, J C, Goodwin, Lynne A, Han, James, Han, Shunsheng, Land, Miriam L, Nolan, Matt, Ovchinnikova, Galina, Pennacchio, Len, Pitluck, Sam, Tapia, Roxanne, Walston Davenport, Karen, Woyke, Tanja, Wiebusch, Sigrid, Basner, Alexander, Abe, Fumiyoshi, Horikoshi, Koki, & Antranikian, Garabed. Complete Genome Sequences of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae. United States.
Klippel, Dr Barbara, Bruce, David, Davenport, Karen W, Detter, J C, Goodwin, Lynne A, Han, James, Han, Shunsheng, Land, Miriam L, Nolan, Matt, Ovchinnikova, Galina, Pennacchio, Len, Pitluck, Sam, Tapia, Roxanne, Walston Davenport, Karen, Woyke, Tanja, Wiebusch, Sigrid, Basner, Alexander, Abe, Fumiyoshi, Horikoshi, Koki, and Antranikian, Garabed. Sat . "Complete Genome Sequences of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae". United States.
@article{osti_1047609,
title = {Complete Genome Sequences of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4, polysaccharide-degrading members of the family Flavobacteriaceae},
author = {Klippel, Dr Barbara and Bruce, David and Davenport, Karen W and Detter, J C and Goodwin, Lynne A and Han, James and Han, Shunsheng and Land, Miriam L and Nolan, Matt and Ovchinnikova, Galina and Pennacchio, Len and Pitluck, Sam and Tapia, Roxanne and Walston Davenport, Karen and Woyke, Tanja and Wiebusch, Sigrid and Basner, Alexander and Abe, Fumiyoshi and Horikoshi, Koki and Antranikian, Garabed},
abstractNote = {Two members of the family Flavobacteriaceae were isolated from deep sea sediments in Japan using artificial seawater and cellulose, xylan and chitin as sole carbon and energy source. Here, we present the finished genome sequence of Krokinobacter sp. 4H-3-7-5 and Lacinutrix sp. 5H-3-7-4 which both encode for putatively novel enzymes involved in cellulose, hemicellulose and chitin degradation.},
doi = {},
journal = {Journal of Bacteriology},
issn = {0021-9193},
number = ,
volume = ,
place = {United States},
year = {2011},
month = {1}
}