The Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20

Hauser, Loren John; Wall, Judy D.; Brown, Steven D; Land, Miriam L; Bruce, David; Detter, J. Chris; Frank, Larimer; Goodwin, Lynne A.; Han, Cliff; Lapidus, Alla L.; Nolan, Matt; Palumbo, Anthony Vito; Pitluck, Samual; Keller, Kimberly L; Rapp-Giles, Barbara J; Price, Morgan N.; Lin, Monica; Tapia, Roxanne; Copeland, A; Cheng, Jan-Fang

doi:10.1128/JB.05400-11

Title: The Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20

Journal Article · Sat Jan 01 00:00:00 EST 2011 · Journal of Bacteriology

DOI:https://doi.org/10.1128/JB.05400-11· OSTI ID:1033153

Hauser, Loren John ^[1]; Wall, Judy D. ^[2]; Brown, Steven D ^[1]; Land, Miriam L ^[1]; Bruce, David ^[3]; Detter, J. Chris ^[3]; Frank, Larimer ^[4]; Goodwin, Lynne A. ^[5]; Han, Cliff ^[5]; Lapidus, Alla L. ^[3]; Nolan, Matt ^[3]; Palumbo, Anthony Vito ^[1]; Pitluck, Samual ^[3]; Keller, Kimberly L ^[6]; Rapp-Giles, Barbara J ^[6]; Price, Morgan N. ^[7]; Lin, Monica ^[8]; Tapia, Roxanne ^[5]; Copeland, A ^[3]; Cheng, Jan-Fang ^[3]

ORNL
University of Missouri
U.S. Department of Energy, Joint Genome Institute
Oak Ridge National Laboratory (ORNL)
Los Alamos National Laboratory (LANL)
University of Missouri, Columbia
Lawrence Berkeley National Laboratory (LBNL)
University of California, Berkeley

Desulfovibrio alaskensis G20 (formerly desulfuricans G20) is a Gram-negative mesophilic sulfate-reducing bacterium (SRB), known to corrode ferrous metals and to reduce toxic radionuclides and metals such as uranium and chromium to sparingly soluble and less toxic forms. We present the 3.7 Mb genome sequence to provide insights into its physiology.

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Research Organization:: Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)

Sponsoring Organization:: USDOE Office of Science (SC)

DOE Contract Number:: DE-AC05-00OR22725

OSTI ID:: 1033153

Journal Information:: Journal of Bacteriology, Vol. 193, Issue 16; ISSN 0021-9193

Country of Publication:: United States

Language:: English

References (8)

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Cited By (9)

Sulfate Transporters in Dissimilatory Sulfate Reducing Microorganisms: A Comparative Genomics Analysis Marietou, Angeliki; Røy, Hans; Jørgensen, Bo B. Frontiers in Microbiology, Vol. 9 https://doi.org/10.3389/fmicb.2018.00309	journal	March 2018
Reconstruction of novel transcription factor regulons through inference of their binding sites Elmas, Abdulkadir; Wang, Xiaodong; Samoilov, Michael S. Columbia University https://doi.org/10.7916/d8k07469	text	January 2015
Shotgun proteomic analysis of nanoparticle-synthesizing Desulfovibrio alaskensis in response to platinum and palladium Capeness, Michael J.; Imrie, Lisa; Mühlbauer, Lukas F. Microbiology, Vol. 165, Issue 12 https://doi.org/10.1099/mic.0.000840	journal	December 2019
Bulk phase resource ratio alters carbon steel corrosion rates and endogenously produced extracellular electron transfer mediators in a sulfate-reducing biofilm Krantz, Gregory P.; Lucas, Kilean; Wunderlich, Erica L. - Taylor & Francis https://doi.org/10.6084/m9.figshare.9505367.v1	text	January 2019
Meta-omics approaches to understand and improve wastewater treatment systems Rodríguez, Elisa; García-Encina, Pedro A.; Stams, Alfons J. M. Reviews in Environmental Science and Bio/Technology, Vol. 14, Issue 3 https://doi.org/10.1007/s11157-015-9370-x	journal	July 2015
The genetic basis of energy conservation in the sulfate-reducing bacterium Desulfovibrio alaskensis G20 Price, Morgan N.; Ray, Jayashree; Wetmore, Kelly M. Frontiers in Microbiology, Vol. 5 https://doi.org/10.3389/fmicb.2014.00577	journal	October 2014
Thermophilic lignocellulose deconstruction Blumer-Schuette, Sara E.; Brown, Steven D.; Sander, Kyle B. FEMS Microbiology Reviews, Vol. 38, Issue 3 https://doi.org/10.1111/1574-6976.12044	journal	May 2014
Patterns of sulfur isotope fractionation during microbial sulfate reduction Bradley, A. S.; Leavitt, W. D.; Schmidt, M. Geobiology, Vol. 14, Issue 1 https://doi.org/10.1111/gbi.12149	journal	July 2015
A genomic approach to the cryptic secondary metabolome of the anaerobic world Letzel, Anne-Catrin; Pidot, Sacha J.; Hertweck, Christian Nat. Prod. Rep., Vol. 30, Issue 3 https://doi.org/10.1039/c2np20103h	journal	January 2013

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59 BASIC BIOLOGICAL SCIENCES
60 APPLIED LIFE SCIENCES
CHROMIUM
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PHYSIOLOGY
RADIOISOTOPES
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genome sequence
genome annotation
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Title: The Complete Genome Sequence and Updated Annotation of Desulfovibrio alaskensis G20

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References (8)

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