CRISPRTarget: Bioinformatic prediction and analysis of crRNA targets
|
journal
|
February 2013 |
Sponge-Associated Microorganisms: Evolution, Ecology, and Biotechnological Potential
|
journal
|
June 2007 |
An updated evolutionary classification of CRISPR–Cas systems
|
journal
|
September 2015 |
An environmental bacterial taxon with a large and distinct metabolic repertoire
|
journal
|
January 2014 |
PILER-CR: Fast and accurate identification of CRISPR repeats
|
journal
|
January 2007 |
REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
|
journal
|
November 2014 |
Bacterial ‘immunity’ against bacteriophages
|
journal
|
January 2012 |
The phage abortive infection system, ToxIN, functions as a protein–RNA toxin–antitoxin pair
|
journal
|
January 2009 |
The interplay of restriction-modification systems with mobile genetic elements and their prokaryotic hosts
|
journal
|
August 2014 |
Major bacterial lineages are essentially devoid of CRISPR-Cas viral defence systems
|
journal
|
February 2016 |
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
|
journal
|
May 2007 |
Comparative genomics of defense systems in archaea and bacteria
|
journal
|
March 2013 |
Diverse Functions of Restriction-Modification Systems in Addition to Cellular Defense
|
journal
|
March 2013 |
Lifestyle Evolution in Cyanobacterial Symbionts of Sponges
|
journal
|
June 2015 |
Trimmomatic: a flexible trimmer for Illumina sequence data
|
journal
|
April 2014 |
Current-induced flow through living sponges in nature.
|
journal
|
May 1977 |
In situ fluxes of dissolved inorganic nitrogen from the sponge community on Conch Reef, Key Largo, Florida
|
journal
|
May 2008 |
Sponge disease: a global threat?
|
journal
|
June 2007 |
CRISPRmap: an automated classification of repeat conservation in prokaryotic adaptive immune systems
|
journal
|
July 2013 |
IMG: the integrated microbial genomes database and comparative analysis system
|
journal
|
December 2011 |
Prodigal: prokaryotic gene recognition and translation initiation site identification
|
journal
|
March 2010 |
Do associated microbial abundances impact marine demosponge pumping rates and tissue densities?
|
journal
|
November 2007 |
A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes
|
journal
|
April 2003 |
Precambrian Sponges with Cellular Structures
|
journal
|
February 1998 |
Nutrient Fluxes Through Sponges: Biology, Budgets, and Ecological Implications
|
book
|
January 2012 |
Interactive metagenomic visualization in a Web browser
|
journal
|
September 2011 |
The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats
|
journal
|
January 2007 |
The Amphimedon queenslandica genome and the evolution of animal complexity
|
journal
|
August 2010 |
Bacterial Uptake by the Marine Sponge Aplysina aerophoba
|
journal
|
January 2007 |
Genomic insights into the marine sponge microbiome
|
journal
|
July 2012 |
InterProScan 5: genome-scale protein function classification
|
journal
|
January 2014 |
CDD: NCBI's conserved domain database
|
journal
|
November 2014 |
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
|
journal
|
April 2012 |
The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features
|
journal
|
January 2014 |
Evolution and classification of the CRISPR–Cas systems
|
journal
|
May 2011 |
Comparative analysis of CRISPR cassettes from the human gut metagenomic contigs
|
journal
|
January 2014 |
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
|
journal
|
June 2007 |
Evolutionary Dynamics of Clustered Irregularly Interspaced Short Palindromic Repeat Systems in the Ocean Metagenome
|
journal
|
January 2010 |
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
|
journal
|
May 2012 |
Physiology, phylogeny and in situ evidence for bacterial and archaeal nitrifiers in the marine sponge Aplysina aerophoba
|
journal
|
November 2008 |
Analysis of the first genome fragment from the marine sponge-associated, novel candidate phylum Poribacteria by environmental genomics
|
journal
|
April 2006 |
Average genome size estimation improves comparative metagenomics and sheds light on the functional ecology of the human microbiome
|
journal
|
March 2015 |
Phosphorothioation of DNA in bacteria by dnd genes
|
journal
|
October 2007 |
CRISPR/Cas, the Immune System of Bacteria and Archaea
|
journal
|
January 2010 |
Fast gapped-read alignment with Bowtie 2
|
journal
|
March 2012 |
Implications of streamlining theory for microbial ecology
|
journal
|
April 2014 |
Basic local alignment search tool
|
journal
|
October 1990 |
Environments shape the nucleotide composition of genomes
|
journal
|
December 2005 |
Functional equivalence and evolutionary convergence in complex communities of microbial sponge symbionts
|
journal
|
June 2012 |
Revealing microbial functional activities in the Red Sea sponge S tylissa carteri by metatranscriptomics : Metatranscriptomics of marine sponge symbionts
|
journal
|
July 2014 |
Prokaryotic Nucleotide Composition Is Shaped by Both Phylogeny and the Environment
|
journal
|
April 2015 |
The functional roles of marine sponges
|
journal
|
September 2008 |
Diversity, structure and convergent evolution of the global sponge microbiome
|
journal
|
June 2016 |
Integrative analysis of environmental sequences using MEGAN4
|
journal
|
June 2011 |
The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes
|
journal
|
September 2008 |
The Sequence Alignment/Map format and SAMtools
|
journal
|
June 2009 |
Hologenome analysis of two marine sponges with different microbiomes
|
journal
|
February 2016 |
The phage growth limitation system in Streptomyces coelicolor A(3)2 is a toxin/antitoxin system, comprising enzymes with DNA methyltransferase, protein kinase and ATPase activity
|
journal
|
March 2015 |
Functional genomic signatures of sponge bacteria reveal unique and shared features of symbiosis
|
journal
|
June 2010 |
REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
|
journal
|
October 2009 |
DNA extraction approaches substantially influence the assessment of the human breast milk microbiome
|
journal
|
January 2020 |
Characterization and functional analysis of phytoene synthase gene family in tobacco
|
journal
|
January 2021 |
The Amphimedon queenslandica genome and the evolution of animal complexity
|
text
|
January 2010 |
Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens
|
journal
|
March 2021 |
CXCR4 signaling directs Igk recombination and the molecular mechanisms of late B lymphopoiesis
|
journal
|
September 2019 |