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Title: Two Outer Membrane Proteins Contribute to Caulobacter crescentus Cellular Fitness by Preventing Intracellular S-Layer Protein Accumulation

Journal Article · · Applied and Environmental Microbiology
DOI:https://doi.org/10.1128/AEM.02479-16· OSTI ID:1349009
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  1. Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
  2. Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
  3. Univ. of British Columbia, Vancouver, BC (Canada)

Surface layers, or S-layers, are two-dimensional protein arrays that form the outermost layer of many bacteria and archaea. They serve several functions, including physical protection of the cell from environmental threats. The high abundance of S-layer proteins necessitates a highly efficient export mechanism to transport the S-layer protein from the cytoplasm to the cell exterior.Caulobacter crescentusis unique in that it has two homologous, seemingly redundant outer membrane proteins, RsaFaand RsaFb, which together with other components form a type I protein translocation pathway for S-layer export. These proteins have homology toEscherichia coliTolC, the outer membrane channel of multidrug efflux pumps. Here we provide evidence that, unlike TolC, RsaFaand RsaFbare not involved in either the maintenance of membrane stability or the active export of antimicrobial compounds. Rather, RsaFaand RsaFbare required to prevent intracellular accumulation and aggregation of the S-layer protein RsaA; deletion of RsaFaand RsaFbled to a general growth defect and lowered cellular fitness. Using Western blotting, transmission electron microscopy, and transcriptome sequencing (RNA-seq), we show that loss of both RsaFaand RsaFbled to accumulation of insoluble RsaA in the cytoplasm, which in turn caused upregulation of a number of genes involved in protein misfolding and degradation pathways. These findings provide new insight into the requirement for RsaFaand RsaFbin cellular fitness and tolerance to antimicrobial agents and further our understanding of the S-layer export mechanism on both the transcriptional and translational levels inC. crescentus. IMPORTANCEDecreased growth rate and reduced cell fitness are common side effects of protein production in overexpression systems. Inclusion bodies typically form inside the cell, largely due to a lack of sufficient export machinery to transport the overexpressed proteins to the extracellular environment. This phenomenon can conceivably also occur in natural systems. As one example of a system evolved to prevent intracellular protein accumulation, our study demonstrates thatCaulobacter crescentushas two homologous outer membrane transporter proteins that are involved in S-layer export. This is an interesting case study that demonstrates how bacteria can evolve redundancy to ensure adequate protein export functionality and maintain high cellular fitness. Moreover, we provide evidence that these two outer membrane proteins, although being the closestC. crescentushomologs to TolC inE. coli, do not process TolC functionality inC. crescentus.

Research Organization:
Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
AC52-07NA27344
OSTI ID:
1349009
Report Number(s):
LLNL-JRNL-692607
Journal Information:
Applied and Environmental Microbiology, Vol. 82, Issue 23; ISSN 0099-2240
Publisher:
American Society for MicrobiologyCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 1 work
Citation information provided by
Web of Science

References (58)

Systems Biology of Caulobacter journal December 2007
Cell-cycle progression and the generation of asymmetry in Caulobacter crescentus journal April 2004
Two-Component Signal Transduction Pathways Regulating Growth and Cell Cycle Progression in a Bacterium: A System-Level Analysis journal September 2005
Assembly of the Caulobacter cell division machine: Divisome assembly in Caulobacter journal May 2011
Whole-Genome Transcriptional Analysis of Heavy Metal Stresses in Caulobacter crescentus journal November 2005
Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance journal July 2015
The Caulobacter crescentus Paracrystalline S-Layer Protein Is Secreted by an ABC Transporter (Type I) Secretion Apparatus journal June 1998
Two Outer Membrane Proteins Are Required for Maximal Type I Secretion of the Caulobacter crescentus S-Layer Protein journal November 2004
S-Layer Proteins journal February 2000
Effect of paracrystalline protein surface layers on predation by Bdellovibrio bacteriovorus. journal January 1991
The Bacterial Surface Layer Provides Protection against Antimicrobial Peptides journal May 2012
Biogenesis and functions of bacterial S-layers journal February 2014
Clostridium difficile Has Two Parallel and Essential Sec Secretion Systems journal June 2011
Type I secretion in gram-negative bacteria journal November 2004
Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export journal June 2000
The essential genome of a bacterium journal January 2011
AcrA, AcrB, and TolC of Escherichia coli Form a Stable Intermembrane Multidrug Efflux Complex journal July 2004
Mechanism and Function of the Outer Membrane Channel TolC in Multidrug Resistance and Physiology of Enterobacteria journal January 2011
Mechanisms of RND multidrug efflux pumps journal May 2009
Identification and characterization of the TolC protein, an outer membrane protein from Escherichia coli. journal January 1983
Additive effect of tolC and rfa mutations on the hydrophobic barrier of the outer membrane of Escherichia coli K-12. journal January 1994
An nptI-sacB-sacR cartridge for constructing directed, unmarked mutations in Gram-negative bacteria by marker exchange-eviction mutagenesis journal January 1987
A cell cycle-regulated bacterial DNA methyltransferase is essential for viability. journal February 1996
Development of an HIV-1 Microbicide Based on Caulobacter crescentus: Blocking Infection by High-Density Display of Virus Entry Inhibitors journal June 2013
Analysis of the Intact Surface Layer of Caulobacter crescentus by Cryo-Electron Tomography journal September 2010
Synthetic Interaction between the TipN Polarity Factor and an AcrAB-Family Efflux Pump Implicates Cell Polarity in Bacterial Drug Resistance journal May 2014
Isolation and comparison of the paracrystalline surface layer proteins of freshwater caulobacters. journal March 1992
Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation journal October 2008
MochiView: versatile software for genome browsing and DNA motif analysis journal April 2010
Open source clustering software journal February 2004
Java Treeview--extensible visualization of microarray data journal June 2004
Biomineralization of Uranium by PhoY Phosphatase Activity Aids Cell Survival in Caulobacter crescentus journal May 2014
THE USE OF LEAD CITRATE AT HIGH pH AS AN ELECTRON-OPAQUE STAIN IN ELECTRON MICROSCOPY journal April 1963
Amyloid-like Aggregates Sequester Numerous Metastable Proteins with Essential Cellular Functions journal January 2011
SyntTax: a web server linking synteny to prokaryotic taxonomy journal January 2013
A Polymeric Protein Anchors the Chromosomal Origin/ParB Complex at a Bacterial Cell Pole journal September 2008
Proteomic analysis of the Caulobacter crescentus stalk indicates competence for nutrient uptake journal August 2002
Transcriptional regulation of the S-layer protein type I secretion system in Caulobacter crescentus journal October 2005
The Coding and Noncoding Architecture of the Caulobacter crescentus Genome journal July 2014
Localization of Chaperones DnaK and GroEL in Bacterial Inclusion Bodies journal May 2005
GroES/GroEL and DnaK/DnaJ Have Distinct Roles in Stress Responses and during Cell Cycle Progression in Caulobacter crescentus journal September 2006
Sequential mechanism of solubilization and refolding of stable protein aggregates by a bichaperone network journal November 1999
Role of the Heat Shock Protein DnaJ in the Lon-dependent Degradation of Naturally Unstable Proteins journal November 1996
A molecular chaperone, ClpA, functions like DnaK and DnaJ. journal December 1994
Shotgun Proteomic Analysis Unveils Survival and Detoxification Strategies by Caulobacter crescentus during Exposure to Uranium, Chromium, and Cadmium journal March 2014
Antibiotic Susceptibility Profiles ofEscherichia coli Strains Lacking Multidrug Efflux Pump Genes journal April 2001
AbuO, a TolC-Like Outer Membrane Protein of Acinetobacter baumannii, Is Involved in Antimicrobial and Oxidative Stress Resistance journal December 2014
The TolC Homologue of Brucella suis Is Involved in Resistance toAntimicrobial Compounds and Virulence journal November 2006
Multidrug resistance pump AcrAB-TolC is required for high-level, Tet(A)-mediated tetracycline resistance in Escherichia coli journal May 2006
Multicomponent drug efflux complexes: architecture and mechanism of assembly journal September 2009
Kinetic control of TolC recruitment by multidrug efflux complexes journal September 2009
Simulating Gram-Negative Bacterial Outer Membrane: A Coarse Grain Model journal September 2015
Importance of Real-Time Assays To Distinguish Multidrug Efflux Pump-Inhibiting and Outer Membrane-Destabilizing Activities in Escherichia coli journal May 2015
A novel metallo-β-lactamase, Mbl1b, produced by the environmental bacterium Caulobacter crescentus 1 journal November 2001
Protein aggregation in bacteria: the thin boundary between functionality and toxicity journal September 2013
Components of the E. coli envelope are affected by and can react to protein over-production in the cytoplasm journal January 2009
Effects of recombinant protein misfolding and aggregation on bacterial membranes journal February 2009
Envelope-associated nucleoid from Caulobacter crescentus stalked and swarmer cells. journal January 1977