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Title: The influence of age and gender on skin-associated microbial communities in urban and rural human populations

Journal Article · · PLoS ONE
 [1];  [1];  [1];  [2];  [2];  [3];  [3];  [4];  [1];  [5]
  1. Fudan Univ., Shanghai (China)
  2. Johnson & Johnson China Ltd., Shanghai (China)
  3. Univ. of Chicago, Chicago, IL (United States)
  4. Univ. of Chicago, Chicago, IL (United States); Argonne National Lab. (ANL), Argonne, IL (United States); Marine Biological Lab., Woods Hole, MA (United States); Zhejiang Univ., Hangzhou (China)
  5. National Cancer Institute, Bethesda, MD (United States)

Differences in the bacterial community structure associated with 7 skin sites in 71 healthy people over five days showed significant correlations with age, gender, physical skin parameters, and whether participants lived in urban or rural locations in the same city. While body site explained the majority of the variance in bacterial community structure, the composition of the skin-associated bacterial communities were predominantly influenced by whether the participants were living in an urban or rural environment, with a significantly greater relative abundance of Trabulsiella in urban populations. Adults maintained greater overall microbial diversity than adolescents or the elderly, while the intragroup variation among the elderly and rural populations was significantly greater. Lastly, skin-associated bacterial community structure and composition could predict whether a sample came from an urban or a rural resident ~ 5x greater than random.

Research Organization:
Argonne National Laboratory (ANL), Argonne, IL (United States)
Sponsoring Organization:
Johnson and Johnson; USDOE
Grant/Contract Number:
AC02-06CH11357
OSTI ID:
1339457
Journal Information:
PLoS ONE, Vol. 10, Issue 10; ISSN 1932-6203
Publisher:
Public Library of ScienceCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 138 works
Citation information provided by
Web of Science

References (39)

The skin microbiome journal March 2011
Molecular analysis of human forearm superficial skin bacterial biota journal February 2007
A diversity profile of the human skin microbiota journal July 2008
Bacterial Community Variation in Human Body Habitats Across Space and Time journal November 2009
Topographical and Temporal Diversity of the Human Skin Microbiome journal May 2009
The influence of sex, handedness, and washing on the diversity of hand surface bacteria journal November 2008
Cohabiting family members share microbiota with one another and with their dogs journal April 2013
Distinct cutaneous bacterial assemblages in a sampling of South American Amerindians and US residents journal August 2012
Human gut microbiota community structures in urban and rural populations in Russia journal September 2013
Host lifestyle affects human microbiota on daily timescales journal January 2014
Longitudinal analysis of microbial interaction between humans and the indoor environment journal August 2014
Molecular Analysis of Fungal Microbiota in Samples from Healthy Human Skin and Psoriatic Lesions journal August 2006
Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex journal February 2008
QIIME allows analysis of high-throughput community sequencing data journal April 2010
An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea journal December 2011
Search and clustering orders of magnitude faster than BLAST journal August 2010
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy journal June 2007
PyNAST: a flexible tool for aligning sequences to a template alignment journal November 2009
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix journal April 2009
Conservation evaluation and phylogenetic diversity journal January 1992
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities journal December 2005
Moving pictures of the human microbiome journal January 2011
Age-Related Changes In The Resident Bacterial Flora Of The Human Face journal October 1975
The Normal Flora of the skin in Different age Groups journal April 1969
Diversity of the Human Skin Microbiome Early in Life journal October 2011
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns journal June 2010
Life on Human Surfaces: Skin Metagenomics journal June 2013
Skin physiology in men and women: in vivo evaluation of 300 people including TEWL, SC hydration, sebum content and skin surface pH journal July 2013
Gender-linked differences in human skin journal September 2009
Skin microbiota: Microbial community structure and its potential association with health and disease journal July 2011
Microbial community resemblance methods differ in their ability to detect biologically relevant patterns journal September 2010
A meta-analysis of changes in bacterial and archaeal communities with time journal April 2013
The NIH Human Microbiome Project journal October 2009
The altered landscape of the human skin microbiome in patients with primary immunodeficiencies journal October 2013
Sex, constancy, and skin bacteria journal January 1982
Microbiota-accessible carbohydrates suppress Clostridium difficile infection in a murine model journal April 2018
Infant gut microbiota characteristics generally do not modify effects of lipid-based nutrient supplementation on growth or inflammation: secondary analysis of a randomized controlled trial in Malawi journal September 2020
Additional maternal and nonmaternal factors contribute to microbiota shaping in newborns journal September 2010
The Microbial Ecology of Pilosebaceous Units Isolated from Human Skin journal April 1984

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The ecology of human microbiota: dynamics and diversity in health and disease: Ecology of human microbiota in health and disease journal March 2017
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