UCHIME improves sensitivity and speed of chimera detection
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journal
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June 2011 |
Novel microbial communities of the Haakon Mosby mud volcano and their role as a methane sink
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October 2006 |
Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples
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April 2009 |
Sulfurovum lithotrophicum gen. nov., sp. nov., a novel sulfur-oxidizing chemolithoautotroph within the -Proteobacteria isolated from Okinawa Trough hydrothermal sediments
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September 2004 |
The role of oxygen in the regulation of the metabolism of aerotolerant spirochetes, a major component of ?Thiodendron? bacterial sulfur mats
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November 2004 |
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
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March 2010 |
Real-time detection of actively metabolizing microbes by redox sensing as applied to methylotroph populations in Lake Washington
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March 2008 |
Global dispersion and local diversification of the methane seep microbiome
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March 2015 |
Thiohalobacter thiocyanaticus gen. nov., sp. nov., a moderately halophilic, sulfur-oxidizing gammaproteobacterium from hypersaline lakes, that utilizes thiocyanate
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August 2009 |
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
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June 2013 |
Phylogeny and physiology of candidate phylum ‘Atribacteria’ (OP9/JS1) inferred from cultivation-independent genomics
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June 2015 |
In situ visualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry : Visualizing new proteins in microbes by click chemistry
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April 2014 |
Nitrate-based niche differentiation by distinct sulfate-reducing bacteria involved in the anaerobic oxidation of methane
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September 2013 |
Phylogeny of 16S rRNA, Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase, and Adenosine 5'-Phosphosulfate Reductase Genes from Gamma- and Alphaproteobacterial Symbionts in Gutless Marine Worms (Oligochaeta) from Bermuda and the Bahamas
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August 2006 |
Abundance and spatial organization of Gram-negative sulfate-reducing bacteria in activated sludge investigated by in situ probing with specific 16S rRNA targeted oligonucleotides
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January 1998 |
Atomic force microscopy reveals microscale networks and possible symbioses among pelagic marine bacteria
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December 2009 |
Inferring Correlation Networks from Genomic Survey Data
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September 2012 |
Niche differentiation among sulfur-oxidizing bacterial populations in cave waters
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March 2008 |
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
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November 2014 |
Methods for unveiling cryptic microbial partnerships in nature
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June 2009 |
Single cell activity reveals direct electron transfer in methanotrophic consortia
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September 2015 |
Genomic properties of Marine Group A bacteria indicate a role in the marine sulfur cycle
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September 2013 |
probeBase—an online resource for rRNA-targeted oligonucleotide probes and primers: new features 2016
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November 2015 |
Novel groups of Gammaproteobacteria catalyse sulfur oxidation and carbon fixation in a coastal, intertidal sediment: Sulfur-oxidizing prokaryotes in tidal sediments
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December 2010 |
Indigenous ectosymbiotic bacteria associated with diverse hydrothermal vent invertebrates: Indigenous bacteria associated with vent invertebrates
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February 2010 |
Microfluidic Large-Scale Integration: The Evolution of Design Rules for Biological Automation
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June 2007 |
Marine bacterial, archaeal and protistan association networks reveal ecological linkages
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March 2011 |
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
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May 2012 |
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
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November 2012 |
ARB: a software environment for sequence data
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February 2004 |
A global network of coexisting microbes from environmental and whole-genome sequence data
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journal
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May 2010 |
Metagenomic biomarker discovery and explanation
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journal
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January 2011 |
Sulfurimonas autotrophica gen. nov., sp. nov., a novel sulfur-oxidizing -proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa Trough
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journal
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November 2003 |
Detection of coenzyme F430 in deep sea sediments: A key molecule for biological methanogenesis
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journal
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May 2013 |
Comparative Analysis of Methane-Oxidizing Archaea and Sulfate-Reducing Bacteria in Anoxic Marine Sediments
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journal
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April 2001 |
Structure and function of the global ocean microbiome
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journal
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May 2015 |
Using network analysis to explore co-occurrence patterns in soil microbial communities
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September 2011 |
The geomicrobiology of CO2 geosequestration: a focused review on prokaryotic community responses to field-scale CO2 injection
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journal
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April 2015 |
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples: Primers for marine microbiome studies
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journal
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October 2015 |
Use of magnetic techniques for the isolation of cells
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journal
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February 1999 |
Consumption of Methane and CO2 by Methanotrophic Microbial Mats from Gas Seeps of the Anoxic Black Sea
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journal
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February 2007 |
Diverse syntrophic partnerships from deep-sea methane vents revealed by direct cell capture and metagenomics
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journal
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May 2008 |
Microbial consumption of zero-valence sulfur in marine benthic habitats: Microbial S
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journal
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February 2014 |
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
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November 2003 |
A marine microbial consortium apparently mediating anaerobic oxidation of methane
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journal
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October 2000 |
Tracking heavy water (D 2 O) incorporation for identifying and sorting active microbial cells
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journal
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December 2014 |
Activity, Distribution, and Diversity of Sulfate Reducers and Other Bacteria in Sediments above Gas Hydrate (Cascadia Margin, Oregon)
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journal
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July 2003 |
Optical trapping and manipulation of neutral particles using lasers
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journal
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May 1997 |
The versatile ε-proteobacteria: key players in sulphidic habitats
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May 2006 |
Extensive carbon isotopic heterogeneity among methane seep microbiota
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September 2009 |
Assessing sub-seafloor microbial activity by combined stable isotope probing with deuterated water and 13C-bicarbonate: Microbial carbon assimilation in the sub-seafloor
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April 2012 |
Archaea in coastal marine environments.
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journal
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June 1992 |
Diversity and Abundance of Aerobic and Anaerobic Methane Oxidizers at the Haakon Mosby Mud Volcano, Barents Sea
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March 2007 |
Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes
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journal
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December 1998 |
The EMBL-EBI bioinformatics web and programmatic tools framework
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journal
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April 2015 |
Phylogenetic Oligodeoxynucleotide Probes for the Major Subclasses of Proteobacteria: Problems and Solutions
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journal
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December 1992 |
Intercellular wiring enables electron transfer between methanotrophic archaea and bacteria
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journal
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October 2015 |
Niche Separation of Methanotrophic Archaea (ANME-1 and -2) in Methane-Seep Sediments of the Eastern Japan Sea Offshore Joetsu
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journal
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February 2011 |
Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment
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journal
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May 1996 |
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
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journal
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March 2012 |
Phylogenetic diversity and functional gene patterns of sulfur-oxidizing subseafloor Epsilonproteobacteria in diffuse hydrothermal vent fluids
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journal
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January 2013 |
Evidence of Active Methanogen Communities in Shallow Sediments of the Sonora Margin Cold Seeps
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journal
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March 2015 |
Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis
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journal
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July 2001 |
Biogeographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin
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journal
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February 2006 |
Diversity of symbioses between chemosynthetic bacteria and metazoans at the Guiness cold seep site (Gulf of Guinea, West Africa)
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journal
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November 2012 |
UniFrac: a New Phylogenetic Method for Comparing Microbial Communities
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journal
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December 2005 |
Whole Cell Immunomagnetic Enrichment of Environmental Microbial Consortia Using rRNA-Targeted Magneto-FISH
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book
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September 2013 |
Fixation-free fluorescence in situ hybridization for targeted enrichment of microbial populations
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journal
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May 2010 |
High Bacterial Diversity in Permanently Cold Marine Sediments
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September 1999 |
Phylogenetic Analysis of an Anaerobic, Trichlorobenzene-Transforming Microbial Consortium
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journal
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January 1999 |
Phylogeny of Dissimilatory Sulfite Reductases Supports an Early Origin of Sulfate Respiration
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journal
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June 1998 |
Elemental sulfur as an intermediate of sulfide oxidation with oxygen byDesulfobulbus propionicus
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journal
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August 1995 |
New insights into the relationship between taste perception and oral microbiota composition
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journal
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March 2019 |
Iron acquisition system of Sphingobium sp. strain SYK-6, a degrader of lignin-derived aromatic compounds
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journal
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July 2020 |
Biogeochemistry and Community Composition of Iron- and Sulfur-Precipitating Microbial Mats at the Chefren Mud Volcano (Nile Deep Sea Fan, Eastern Mediterranean)
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journal
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March 2008 |
A global network of coexisting microbes from environmental and whole-genome sequence data
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January 2010 |