Phasing Variants in Poplar Trees using a Hybrid of Short & Long Read Technologies
Conference
·
OSTI ID:1241221
Poplar grow throughout the West coast & are adapted to extremely variable conditions. To examine what allows for this wide range of growth conditions, Jerry Tuskan's team has collected 1000 different individuals from British Columbia to California. In 2009, three Common Gardens were established where each individual was cloned in triplicate. Nearly all of these trees have been sequenced using short read technology, revealing a huge degree of variation in genotype. Correlating this genomic variation to phenotype would be greatly be strengthened if the variants could be phased into long haplotype blocks.
- Research Organization:
- Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
- Sponsoring Organization:
- USDOE Office of Science (SC)
- DOE Contract Number:
- DE-AC02-05CH11231
- OSTI ID:
- 1241221
- Report Number(s):
- LBNL-7035E
- Resource Relation:
- Conference: 8th Annual DOE Joint Genome Institute User Meeting, Walnut Creek, CA
- Country of Publication:
- United States
- Language:
- English
Similar Records
A genomics investigation of partitioning into and among flavonoid-derived condensed tannins for carbon sequestration in Populus
Tensile properties of 3D-printed wood-filled PLA materials using poplar trees
GENETIC MODIFICATION OF GIBBERELLIC ACID SIGNALING TO PROMOTE CARBON SEQUESTRATION IN TREE ROOTS AND STEMS
Technical Report
·
Sun Mar 24 00:00:00 EDT 2013
·
OSTI ID:1241221
Tensile properties of 3D-printed wood-filled PLA materials using poplar trees
Journal Article
·
Thu Oct 08 00:00:00 EDT 2020
· Applied Materials Today
·
OSTI ID:1241221
+8 more
GENETIC MODIFICATION OF GIBBERELLIC ACID SIGNALING TO PROMOTE CARBON SEQUESTRATION IN TREE ROOTS AND STEMS
Technical Report
·
Tue Mar 05 00:00:00 EST 2013
·
OSTI ID:1241221