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Title: Acoustic transfer of protein crystals from agarose pedestals to micromeshes for high-throughput screening

Journal Article · · Acta Crystallographica. Section D: Biological Crystallography (Online)
 [1];  [2];  [3];  [4];  [5];  [6];  [7];  [8];  [4];  [4];  [4];  [4]
  1. Brookhaven National Lab. (BNL), Upton, NY (United States). Office of Educational Programs; City Univ. of New York, Staten Island, NY (United States); Center for Developmental Neuroscience and Dept. of Biology
  2. Brookhaven National Lab. (BNL), Upton, NY (United States). Office of Educational Programs; Univ. at Buffalo, SUNY, NY (United States). Dept. of Biomedical Engineering
  3. Brookhaven National Lab. (BNL), Upton, NY (United States). Office of Educational Programs; Binghamton Univ., NY (United States). Dept. of Biological Sciences
  4. Brookhaven National Lab. (BNL), Upton, NY (United States). Photon Sciences Directorate
  5. Brookhaven National Lab. (BNL), Upton, NY (United States). Office of Educational Programs; Stony Brook Univ., NY (United States). Dept. of Biochemistry and Cell Biology
  6. Brookhaven National Lab. (BNL), Upton, NY (United States). Office of Educational Programs; PEC Univ. of Technology, Chandigarh (India). Dept. of Electronics and Electrical Communication Engineering
  7. Brookhaven National Lab. (BNL), Upton, NY (United States). Office of Educational Programs; Florida Atlantic Univ., Boca Raton, FL (United States). Dept. of Biological Science
  8. Brookhaven National Lab. (BNL), Upton, NY (United States). Biosciences Dept.

Acoustic droplet ejection (ADE) is an emerging technology with broad applications in serial crystallography such as growing, improving and manipulating protein crystals. One application of this technology is to gently transfer crystals onto MiTeGen micromeshes with minimal solvent. Once mounted on a micromesh, each crystal can be combined with different chemicals such as crystal-improving additives or a fragment library. Acoustic crystal mounting is fast (2.33 transfers s-1) and all transfers occur in a sealed environment that is in vapor equilibrium with the mother liquor. Here, a system is presented to retain crystals near the ejection point and away from the inaccessible dead volume at the bottom of the well by placing the crystals on a concave agarose pedestal (CAP) with the same chemical composition as the crystal mother liquor. The bowl-shaped CAP is impenetrable to crystals. Consequently, gravity will gently move the crystals into the optimal location for acoustic ejection. It is demonstrated that an agarose pedestal of this type is compatible with most commercially available crystallization conditions and that protein crystals are readily transferred from the agarose pedestal onto micromeshes with no loss in diffraction quality. It is also shown that crystals can be grown directly on CAPs, which avoids the need to transfer the crystals from the hanging drop to a CAP. This technology has been used to combine thermolysin and lysozyme crystals with an assortment of anomalously scattering heavy atoms. The results point towards a fast nanolitre method for crystal mounting and high-throughput screening.

Research Organization:
Brookhaven National Laboratory (BNL), Upton, NY (United States)
Sponsoring Organization:
USDOE Office of Science (SC)
Grant/Contract Number:
SC00112704
OSTI ID:
1210164
Report Number(s):
BNL-107952-2015-JA; ABCRE6; R&D Project: LS001
Journal Information:
Acta Crystallographica. Section D: Biological Crystallography (Online), Vol. 71, Issue 1; ISSN 1399-0047
Publisher:
International Union of CrystallographyCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 17 works
Citation information provided by
Web of Science

References (27)

Overview of the CCP 4 suite and current developments journal March 2011
Approaches to automated protein crystal harvesting journal January 2014
Quaternary Ammonium Oxidative Demethylation: X-ray Crystallographic, Resonance Raman, and UV–Visible Spectroscopic Analysis of a Rieske-Type Demethylase journal January 2012
Low Nanoliter Acoustic Transfer of Aqueous Fluids with High Precision and Accuracy of Volume Transfer and Positional Placement journal April 2008
Binding of hydroxamic acid inhibitors to crystalline thermolysin suggests a pentacoordinate zinc intermediate in catalysis journal November 1981
First experiences with semi-autonomous robotic harvesting of protein crystals journal March 2011
Transfer of low nanoliter volumes between microplates using focused acoustics?automation considerations journal November 2003
Coot model-building tools for molecular graphics journal November 2004
Acoustically Mounted Microcrystals Yield High-Resolution X-ray Structures journal May 2011
New directions in conventional methods of protein crystallization journal November 2009
Automated Sample Mounting and Alignment System for Biological Crystallography at a Synchrotron Source journal April 2004
Microcrystal manipulation with laser tweezers journal June 2013
In-plate protein crystallization, in situ ligand soaking and X-ray diffraction journal August 2011
Overview of the CCP4 suite and current developments. text January 2011
Bioactive Contaminants Leach from Disposable Laboratory Plasticware journal November 2008
Acoustic matrix microseeding: improving protein crystal growth with minimal chemical bias journal April 2010
Nanolitre-scale crystallization using acoustic liquid-transfer technology journal July 2012
Operator-assisted harvesting of protein crystals using a universal micromanipulation robot journal May 2007
Acoustic methods for high-throughput protein crystal mounting at next-generation macromolecular crystallographic beamlines journal August 2013
CrystalDirect: a new method for automated crystal harvesting based on laser-induced photoablation of thin films journal September 2012
Binding of divalent copper ions to aspartic acid residue 52 in hen egg-white lysozyme journal August 1974
First steps towards effective methods in exploiting high-throughput technologies for the determination of human protein structures of high biomedical value journal September 2006
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 Å resolution journal February 2001
Rapid sample delivery by acoustic injection for serial protein crystallography journal August 2014
ARP / wARP and molecular replacement journal September 2001
Hitting the target: fragment screening with acoustic in situ co-crystallization of proteins plus fragment libraries on pin-mounted data-collection micromeshes journal April 2014
Real-space refinement of the structure of hen egg-white lysozyme journal January 1974

Cited By (7)

Using sound pulses to solve the crystal-harvesting bottleneck journal October 2018
Strategies for sample delivery for femtosecond crystallography text January 2019
Strategies for sample delivery for femtosecond crystallography journal February 2019
Gentle, fast and effective crystal soaking by acoustic dispensing journal March 2017
A shared vision for macromolecular crystallography over the next five years journal November 2019
Moving Liquids with Sound: The Physics of Acoustic Droplet Ejection for Robust Laboratory Automation in Life Sciences journal February 2016
Focusing of Microcrystals and Liquid Condensates in Acoustofluidics journal February 2019

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Acoustic transfer of protein crystals from agarose pedestals to micromeshes for high-throughput screening
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