Photon-in photon-out hard X-ray spectroscopy at the Linac Coherent Light Source

Alonso-Mori, Roberto; Sokaras, Dimosthenis; Zhu, Diling; Kroll, Thomas; Chollet, Mathieu; Feng, Yiping; Glownia, James M.; Kern, Jan; Lemke, Henrik T.; Nordlund, Dennis; Robert, Aymeric; Sikorski, Marcin; Song, Sanghoon; Weng, Tsu -Chien; Bergmann, Uwe

doi:10.1107/S1600577515004488

Title: Photon-in photon-out hard X-ray spectroscopy at the Linac Coherent Light Source

Journal Article · Wed Apr 15 00:00:00 EDT 2015 · Journal of Synchrotron Radiation (Online)

DOI:https://doi.org/10.1107/S1600577515004488· OSTI ID:1208866

Alonso-Mori, Roberto ^[1]; Sokaras, Dimosthenis ^[1]; Zhu, Diling ^[1]; Kroll, Thomas ^[1]; Chollet, Mathieu ^[1]; Feng, Yiping ^[1]; Glownia, James M. ^[1]; Kern, Jan ^[2]; Lemke, Henrik T. ^[1]; Nordlund, Dennis ^[1]; Robert, Aymeric ^[1]; Sikorski, Marcin ^[1]; Song, Sanghoon ^[1]; Weng, Tsu -Chien ^[1]; Bergmann, Uwe ^[1]

SLAC National Accelerator Laboratory, Menlo Park, CA (United States)
SLAC National Accelerator Laboratory, Menlo Park, CA (United States); Lawrence Berkeley National Lab., Berkeley, CA (United States)

X-ray free-electron lasers (FELs) have opened unprecedented possibilities to study the structure and dynamics of matter at an atomic level and ultra-fast timescale. Many of the techniques routinely used at storage ring facilities are being adapted for experiments conducted at FELs. In order to take full advantage of these new sources several challenges have to be overcome. They are related to the very different source characteristics and its resulting impact on sample delivery, X-ray optics, X-ray detection and data acquisition. Here it is described how photon-in photon-out hard X-ray spectroscopy techniques can be applied to study the electronic structure and its dynamics of transition metal systems with ultra-bright and ultra-short FEL X-ray pulses. In particular, some of the experimental details that are different compared with synchrotron-based setups are discussed and illustrated by recent measurements performed at the Linac Coherent Light Source.

View Accepted Manuscript (DOE)

Cite

Export

Save

Research Organization:: SLAC National Accelerator Laboratory (SLAC), Menlo Park, CA (United States)

Sponsoring Organization:: USDOE Office of Science (SC)

Contributing Organization:: Portions of this research were carried out at the Linac Coherent Light Source (LCLS) at the SLAC National Accelerator Laboratory. LCLS is an Office of Science User Facility operated for the US Department of Energy Office of Science by Stanford University.

Grant/Contract Number:: AC03-76SF00515

OSTI ID:: 1208866

Journal Information:: Journal of Synchrotron Radiation (Online), Vol. 22, Issue 3; ISSN 1600-5775

Publisher:: International Union of CrystallographyCopyright Statement

Country of Publication:: United States

Language:: English

Citation Metrics:

Cited by: 30 works

Citation information provided by
Web of Science

References (63)

Energy-dispersive X-ray emission spectroscopy using an X-ray free-electron laser in a shot-by-shot mode Alonso-Mori, R.; Kern, J.; Gildea, R. J. Proceedings of the National Academy of Sciences, Vol. 109, Issue 47, p. 19103-19107 https://doi.org/10.1073/pnas.1211384109	journal	November 2012
A multi-crystal wavelength dispersive x-ray spectrometer Alonso-Mori, Roberto; Kern, Jan; Sokaras, Dimosthenis Review of Scientific Instruments, Vol. 83, Issue 7 https://doi.org/10.1063/1.4737630	journal	July 2012
Demonstration of self-seeding in a hard-X-ray free-electron laser Amann, J.; Berg, W.; Blank, V. Nature Photonics, Vol. 6, Issue 10, p. 693-698 https://doi.org/10.1038/nphoton.2012.180	journal	August 2012
Resonant inelastic x-ray scattering studies of elementary excitations Ament, Luuk J. P.; van Veenendaal, Michel; Devereaux, Thomas P. Reviews of Modern Physics, Vol. 83, Issue 2 https://doi.org/10.1103/RevModPhys.83.705	journal	June 2011
Electronic Transitions in Perovskite: Possible Nonconvecting Layers in the Lower Mantle Badro, J. Science, Vol. 305, Issue 5682 https://doi.org/10.1126/science.1098840	journal	July 2004
Biotic and abiotic products of Mn(II) oxidation by spores of the marine Bacillus sp. strain SG-1 Bargar, John R.; Tebo, Bradley M.; Bergmann, Uwe American Mineralogist, Vol. 90, Issue 1 https://doi.org/10.2138/am.2005.1557	journal	January 2005
Nearest-neighbor oxygen distances in liquid water and ice observed by x-ray Raman based extended x-ray absorption fine structure Bergmann, Uwe; Di Cicco, Andrea; Wernet, Philippe The Journal of Chemical Physics, Vol. 127, Issue 17 https://doi.org/10.1063/1.2784123	journal	November 2007
Characterization of the Mn Oxidation States in Photosystem II by Kβ X-ray Fluorescence Spectroscopy Bergmann, U.; Grush, M. M.; Horne, C. R. The Journal of Physical Chemistry B, Vol. 102, Issue 42 https://doi.org/10.1021/jp982038s	journal	October 1998
X-ray Raman Spectroscopy of Carbon in Asphaltene: Light Element Characterization with Bulk Sensitivity Bergmann, Uwe; Mullins, Oliver C.; Cramer, S. P. Analytical Chemistry, Vol. 72, Issue 11 https://doi.org/10.1021/ac990730t	journal	June 2000
X-ray detectors at the Linac Coherent Light Source Blaj, Gabriel; Caragiulo, Pietro; Carini, Gabriella Journal of Synchrotron Radiation, Vol. 22, Issue 3 https://doi.org/10.1107/S1600577515005317	journal	April 2015
Multiconfigurational nature of 5f orbitals in uranium and plutonium intermetallics Booth, C. H.; Jiang, Y.; Wang, D. L. Proceedings of the National Academy of Sciences, Vol. 109, Issue 26 https://doi.org/10.1073/pnas.1200725109	journal	June 2012
The X-ray Pump–Probe instrument at the Linac Coherent Light Source Chollet, Matthieu; Alonso-Mori, Roberto; Cammarata, Marco Journal of Synchrotron Radiation, Vol. 22, Issue 3 https://doi.org/10.1107/S1600577515005135	journal	April 2015
Identification of a Single Light Atom within a Multinuclear Metal Cluster Using Valence-to-Core X-ray Emission Spectroscopy Delgado-Jaime, Mario Ulises; Dible, Benjamin R.; Chiang, Karen P. Inorganic Chemistry, Vol. 50, Issue 21 https://doi.org/10.1021/ic201173j	journal	November 2011
Development of a compact fast CCD camera and resonant soft x-ray scattering endstation for time-resolved pump-probe experiments Doering, D.; Chuang, Y. -D.; Andresen, N. Review of Scientific Instruments, Vol. 82, Issue 7 https://doi.org/10.1063/1.3609862	journal	July 2011
ePix: a class of architectures for second generation LCLS cameras Dragone, A.; Caragiulo, P.; Markovic, B. Journal of Physics: Conference Series, Vol. 493 https://doi.org/10.1088/1742-6596/493/1/012012	journal	March 2014
First lasing and operation of an ångstrom-wavelength free-electron laser Emma, P.; Akre, R.; Arthur, J. Nature Photonics, Vol. 4, Issue 9 https://doi.org/10.1038/nphoton.2010.176	journal	August 2010
In situ X-ray probing reveals fingerprints of surface platinum oxide Friebel, Daniel; Miller, Daniel J.; O’Grady, Christopher P. Phys. Chem. Chem. Phys., Vol. 13, Issue 1 https://doi.org/10.1039/C0CP01434F	journal	January 2011
High resolution 1s core hole X-ray spectroscopy in 3d transition metal complexes—electronic and structural information Glatzel, Pieter; Bergmann, Uwe Coordination Chemistry Reviews, Vol. 249, Issue 1-2 https://doi.org/10.1016/j.ccr.2004.04.011	journal	January 2005
Electronic Structure of Ni Complexes by X-ray Resonance Raman Spectroscopy (Resonant Inelastic X-ray Scattering) Glatzel, Pieter; Bergmann, Uwe; Gu, Weiwei Journal of the American Chemical Society, Vol. 124, Issue 33 https://doi.org/10.1021/ja026028n	journal	August 2002
Range-extended EXAFS at the $L$ edge of rare earths using high-energy-resolution fluorescence detection: A study of La in LaOCl Glatzel, P.; de Groot, F. M. F.; Manoilova, O. Physical Review B, Vol. 72, Issue 1 https://doi.org/10.1103/PhysRevB.72.014117	journal	July 2005
Site-Selective EXAFS in Mixed-Valence Compounds Using High-Resolution Fluorescence Detection: A Study of Iron in Prussian Blue Glatzel, Pieter; Jacquamet, Lilian; Bergmann, Uwe Inorganic Chemistry, Vol. 41, Issue 12 https://doi.org/10.1021/ic010709m	journal	June 2002
1s2p Resonant Inelastic X-ray Scattering of Iron Oxides de Groot, Frank M. F.; Glatzel, Pieter; Bergmann, Uwe The Journal of Physical Chemistry B, Vol. 109, Issue 44 https://doi.org/10.1021/jp054006s	journal	November 2005
Elimination of the inner-shell lifetime broadening in x-ray-absorption spectroscopy Hämäläinen, K.; Siddons, D. P.; Hastings, J. B. Physical Review Letters, Vol. 67, Issue 20 https://doi.org/10.1103/PhysRevLett.67.2850	journal	November 1991
Developments of X-ray Imaging Detectors at SACLA/SPring-8: Current Status and Future Outlook Hatsui, Takaki Synchrotron Radiation News, Vol. 27, Issue 4 https://doi.org/10.1080/08940886.2014.930805	journal	July 2014
Photosynthetic O2 Formation Tracked by Time-Resolved X-ray Experiments Haumann, M. Science, Vol. 310, Issue 5750 https://doi.org/10.1126/science.1117551	journal	November 2005
Kβ-Detected XANES of Framework-Substituted FeZSM-5 Zeolites Heijboer, Willem M.; Glatzel, Pieter; Sawant, Kaveri R. The Journal of Physical Chemistry B, Vol. 108, Issue 28 https://doi.org/10.1021/jp048368w	journal	July 2004
The adaptive gain integrating pixel detector AGIPD a detector for the European XFEL Henrich, B.; Becker, J.; Dinapoli, R. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, Vol. 633 https://doi.org/10.1016/j.nima.2010.06.107	journal	May 2011
CSPAD-140k: A versatile detector for LCLS experiments Herrmann, Sven; Boutet, Sébastien; Duda, Brian Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, Vol. 718 https://doi.org/10.1016/j.nima.2013.01.057	journal	August 2013
A compact X-ray free-electron laser emitting in the sub-ångström region Ishikawa, Tetsuya; Aoyagi, Hideki; Asaka, Takao Nature Photonics, Vol. 6, Issue 8 https://doi.org/10.1038/nphoton.2012.141	journal	June 2012
Simultaneous Femtosecond X-ray Spectroscopy and Diffraction of Photosystem II at Room Temperature Kern, J.; Alonso-Mori, R.; Tran, R. Science, Vol. 340, Issue 6131 https://doi.org/10.1126/science.1234273	journal	February 2013
Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy Kern, Jan; Tran, Rosalie; Alonso-Mori, Roberto Nature Communications, Vol. 5, Issue 1 https://doi.org/10.1038/ncomms5371	journal	July 2014
Resonant Inelastic X-ray Scattering on Ferrous and Ferric Bis-imidazole Porphyrin and Cytochrome c : Nature and Role of the Axial Methionine–Fe Bond Kroll, Thomas; Hadt, Ryan G.; Wilson, Samuel A. Journal of the American Chemical Society, Vol. 136, Issue 52 https://doi.org/10.1021/ja5100367	journal	December 2014
Resonant inelastic x-ray scattering spectra for electrons in solids Kotani, Akio; Shin, Shik Reviews of Modern Physics, Vol. 73, Issue 1 https://doi.org/10.1103/RevModPhys.73.203	journal	February 2001
Momentum Transfer Dependence of Inelastic X-Ray Scattering from the Li $K$ Edge Krisch, M. H.; Sette, F.; Masciovecchio, C. Physical Review Letters, Vol. 78, Issue 14 https://doi.org/10.1103/PhysRevLett.78.2843	journal	April 1997
X-ray Emission Spectroscopy Evidences a Central Carbon in the Nitrogenase Iron-Molybdenum Cofactor Lancaster, K. M.; Roemelt, M.; Ettenhuber, P. Science, Vol. 334, Issue 6058 https://doi.org/10.1126/science.1206445	journal	November 2011
High wavevector temporal speckle correlations at the Linac Coherent Light Source Lee, Sooheyong; Roseker, Wojciech; Gutt, Christian Optics Express, Vol. 20, Issue 9 https://doi.org/10.1364/OE.20.009790	journal	January 2012
The Coherent X-ray Imaging instrument at the Linac Coherent Light Source Liang, Mengning; Williams, Garth J.; Messerschmidt, Marc Journal of Synchrotron Radiation, Vol. 22, Issue 3 https://doi.org/10.1107/S160057751500449X	journal	April 2015
Metal–Ligand Covalency of Iron Complexes from High-Resolution Resonant Inelastic X-ray Scattering Lundberg, Marcus; Kroll, Thomas; DeBeer, Serena Journal of the American Chemical Society, Vol. 135, Issue 45 https://doi.org/10.1021/ja408072q	journal	October 2013
X-ray-Induced Dissociation of H2O and Formation of an O2-H2 Alloy at High Pressure Mao, W. L.; Mao, H. -k.; Meng, Y. Science, Vol. 314, Issue 5799 https://doi.org/10.1126/science.1132884	journal	October 2006
Absence of Mn-Centered Oxidation in the S₂ → S₃ Transition: Implications for the Mechanism of Photosynthetic Water Oxidation Messinger, Johannes; Robblee, John H.; Bergmann, Uwe Journal of the American Chemical Society, Vol. 123, Issue 32 https://doi.org/10.1021/ja004307+	journal	July 2001
Time-Resolved Infrared Detection of the Proton and Protein Dynamics during Photosynthetic Oxygen Evolution Noguchi, Takumi; Suzuki, Hiroyuki; Tsuno, Masaya Biochemistry, Vol. 51, Issue 15 https://doi.org/10.1021/bi300294n	journal	April 2012
Direct Detection of Oxygen Ligation to the Mn4Ca Cluster of Photosystem II by X-ray Emission Spectroscopy Pushkar, Yulia; Long, Xi; Glatzel, Pieter Angewandte Chemie International Edition, Vol. 49, Issue 4 https://doi.org/10.1002/anie.200905366	journal	December 2009
Structure and Orientation of the Mn ₄ Ca Cluster in Plant Photosystem II Membranes Studied by Polarized Range-extended X-ray Absorption Spectroscopy Pushkar, Yulia; Yano, Junko; Glatzel, Pieter Journal of Biological Chemistry, Vol. 282, Issue 10 https://doi.org/10.1074/jbc.M610505200	journal	December 2006
Atomic inner-shell X-ray laser at 1.46 nanometres pumped by an X-ray free-electron laser Rohringer, Nina; Ryan, Duncan; London, Richard A. Nature, Vol. 481, Issue 7382 https://doi.org/10.1038/nature10721	journal	January 2012
Identification of CO Adsorption Sites in Supported Pt Catalysts Using High-Energy-Resolution Fluorescence Detection X-ray Spectroscopy Safonova, Olga V.; Tromp, Moniek; van Bokhoven, Jeroen A. The Journal of Physical Chemistry B, Vol. 110, Issue 33 https://doi.org/10.1021/jp063416t	journal	August 2006
Nanoflow electrospinning serial femtosecond crystallography Sierra, Raymond G.; Laksmono, Hartawan; Kern, Jan Acta Crystallographica Section D Biological Crystallography, Vol. 68, Issue 11, p. 1584-1587 https://doi.org/10.1107/S0907444912038152	journal	October 2012
X-ray Emission Spectroscopy To Study Ligand Valence Orbitals in Mn Coordination Complexes Smolentsev, Grigory; Soldatov, Alexander V.; Messinger, Johannes Journal of the American Chemical Society, Vol. 131, Issue 36 https://doi.org/10.1021/ja808526m	journal	September 2009
Inelastic scattering from core electrons: A multiple scattering approach Soininen, J. A.; Ankudinov, A. L.; Rehr, J. J. Physical Review B, Vol. 72, Issue 4 https://doi.org/10.1103/PhysRevB.72.045136	journal	July 2005
A high resolution and large solid angle x-ray Raman spectroscopy end-station at the Stanford Synchrotron Radiation Lightsource Sokaras, D.; Nordlund, D.; Weng, T. -C. Review of Scientific Instruments, Vol. 83, Issue 4 https://doi.org/10.1063/1.4704458	journal	April 2012
A seven-crystal Johann-type hard x-ray spectrometer at the Stanford Synchrotron Radiation Lightsource Sokaras, D.; Weng, T. -C.; Nordlund, D. Review of Scientific Instruments, Vol. 84, Issue 5 https://doi.org/10.1063/1.4803669	journal	May 2013
Momentum-transfer dependence of x-ray Raman scattering at the Be K-edge Sternemann, C.; Volmer, M.; Soininen, J. A. Physical Review B, Vol. 68, Issue 3 https://doi.org/10.1103/PhysRevB.68.035111	journal	July 2003
A high‐resolution x‐ray fluorescence spectrometer for near‐edge absorption studies Stojanoff, V.; Hämäläinen, K.; Siddons, D. P. Review of Scientific Instruments, Vol. 63, Issue 1 https://doi.org/10.1063/1.1143112	journal	January 1992
Large-format, high-speed, X-ray pnCCDs combined with electron and ion imaging spectrometers in a multipurpose chamber for experiments at 4th generation light sources Strüder, Lothar; Epp, Sascha; Rolles, Daniel Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, Vol. 614, Issue 3 https://doi.org/10.1016/j.nima.2009.12.053	journal	March 2010
Transition-Edge Sensor Microcalorimeters for X-ray Beamline Science Ullom, J. N.; Doriese, W. B.; Fischer, D. A. Synchrotron Radiation News, Vol. 27, Issue 4 https://doi.org/10.1080/08940886.2014.930806	journal	July 2014
Mn K-Edge XANES and Kβ XES Studies of Two Mn−Oxo Binuclear Complexes: Investigation of Three Different Oxidation States Relevant to the Oxygen-Evolving Complex of Photosystem II Visser, Hendrik; Anxolabéhère-Mallart, Elodie; Bergmann, Uwe Journal of the American Chemical Society, Vol. 123, Issue 29 https://doi.org/10.1021/ja004306h	journal	July 2001
The Structure of the First Coordination Shell in Liquid Water Wernet, Ph. Science, Vol. 304, Issue 5673 https://doi.org/10.1126/science.1096205	journal	May 2004
X-ray damage to the Mn4Ca complex in single crystals of photosystem II: A case study for metalloprotein crystallography Yano, J.; Kern, J.; Irrgang, K. -D. Proceedings of the National Academy of Sciences, Vol. 102, Issue 34 https://doi.org/10.1073/pnas.0505207102	journal	August 2005
Mn ₄ Ca Cluster in Photosynthesis: Where and How Water is Oxidized to Dioxygen Yano, Junko; Yachandra, Vittal Chemical Reviews, Vol. 114, Issue 8 https://doi.org/10.1021/cr4004874	journal	March 2014
Femtosecond electronic response of atoms to ultra-intense X-rays Young, L.; Kanter, E. P.; Krässig, B. Nature, Vol. 466, Issue 7302 https://doi.org/10.1038/nature09177	journal	July 2010
Tracking excited-state charge and spin dynamics in iron coordination complexes Zhang, Wenkai; Alonso-Mori, Roberto; Bergmann, Uwe Nature, Vol. 509, Issue 7500 https://doi.org/10.1038/nature13252	journal	May 2014
Direct Detection of Oxygen Ligation to the Mn4Ca Cluster of Photosystem II by X-ray Emission Spectroscopy Pushkar, Yulia; Long, Xi; Glatzel, Pieter Angewandte Chemie, Vol. 122, Issue 4 https://doi.org/10.1002/ange.200905366	journal	December 2009
Multiconfigurational nature of 5f orbitals in uranium and plutonium intermetallics Booth, C. H.; Jiang, Yu; Wang, D. L. arXiv https://doi.org/10.48550/arxiv.1208.2234	text	January 2012
Inelastic Scattering from Core-electrons: a Multiple Scattering Approach Soininen, J. A.; Ankudinov, A. L.; Rehr, J. J. arXiv https://doi.org/10.48550/arxiv.cond-mat/0503736	text	January 2005

Cited By (5)

Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers Fuller, Franklin D.; Gul, Sheraz; Chatterjee, Ruchira Nature Methods, Vol. 14, Issue 4 https://doi.org/10.1038/nmeth.4195	journal	February 2017
Spectroscopy of low and intermediate Z elements at extreme conditions: in situ studies of Earth materials at pressure and temperature via X-ray Raman scattering Sternemann, C.; Wilke, M. High Pressure Research, Vol. 36, Issue 3 https://doi.org/10.1080/08957959.2016.1198903	journal	July 2016
Ultrafast Time-Resolved Hard X-Ray Emission Spectroscopy on a Tabletop Miaja-Avila, Luis; O’Neil, Galen C.; Joe, Young I. Physical Review X, Vol. 6, Issue 3 https://doi.org/10.1103/physrevx.6.031047	journal	September 2016
A high-throughput energy-dispersive tender X-ray spectrometer for shot-to-shot sulfur measurements Abraham, Baxter; Nowak, Stanislaw; Weninger, Clemens Journal of Synchrotron Radiation, Vol. 26, Issue 3 https://doi.org/10.1107/s1600577519002431	journal	April 2019
Femtosecond x-ray diffraction reveals a liquid–liquid phase transition in phase-change materials Zalden, Peter; Quirin, Florian; Schumacher, Mathias Science, Vol. 364, Issue 6445 https://doi.org/10.1126/science.aaw1773	journal	June 2019

Similar Records

LUX - a recirculating linac-based facility for ultrafast X-ray science

Conference · Tue Jun 29 00:00:00 EDT 2004 · OSTI ID:1208866

Corlett, J N; Barletta, W A; DeSantis, S; +19 more

The DREAM Endstation at the Linac Coherent Light Source

Journal Article · Wed Oct 19 00:00:00 EDT 2022 · Applied Sciences · OSTI ID:1208866

Walter, Peter; Holmes, Micheal; Obaid, Razib; +14 more

Linac-augmented light sources : an incremental concept for enhancing the capabilities of existing 3rd-generation storage rings.

Technical Report · Mon Apr 28 00:00:00 EDT 2003 · OSTI ID:1208866

Lewellen, J W

Related Subjects

43 PARTICLE ACCELERATORS
FEL
hard X-ray emission spectroscopy
XES
XRS

Title: Photon-in photon-out hard X-ray spectroscopy at the Linac Coherent Light Source

Citation Formats

References (63)

Cited By (5)

Similar Records

Related Subjects