skip to main content
OSTI.GOV title logo U.S. Department of Energy
Office of Scientific and Technical Information

Title: Nutrient requirements and growth physiology of the photoheterotrophic Acidobacterium, Chloracidobacterium thermophilum

Journal Article · · Frontiers in Microbiology
 [1];  [2]
  1. The Pennsylvania State Univ., University Park, PA (United States). Dept. of Biochemistry and Molecular Biology
  2. The Pennsylvania State Univ., University Park, PA (United States). Dept. of Biochemistry and Molecular Biology; Montana State Univ., Bozeman, MT (United States). Dept. of Chemistry and Biochemistry

A novel thermophilic, microaerophilic, anoxygenic, and chlorophototrophic member of the phylum Acidobacteria, Chloracidobacterium thermophilum strain BT, was isolated from a cyanobacterial enrichment culture derived from microbial mats associated with Octopus Spring, Yellowstone National Park, Wyoming. C. thermophilum is strictly dependent on light and oxygen and grows optimally as a photoheterotroph at irradiance values between 20 and 50 µmol photons m⁻² s⁻¹. C. thermophilum is unable to synthesize branched-chain amino acids (AAs), L-lysine, and vitamin B₁₂, which are required for growth. Although the organism lacks genes for autotrophic carbon fixation, bicarbonate is also required. Mixtures of other AAs and 2-oxoglutarate stimulate growth. As suggested from genomic sequence data, C. thermophilum requires a reduced sulfur source such as thioglycolate, cysteine, methionine, or thiosulfate. The organism can be grown in a defined medium at 51° C (Topt; range 44–58°C) in the pH range 5.5–9.5 (pHopt = ~7.0). Using the defined growth medium and optimal conditions, it was possible to isolate new C. thermophilum strains directly from samples of hot springs mats in Yellowstone National Park, Wyoming. The new isolates differ from the type strain with respect to pigment composition, morphology in liquid culture, and temperature adaptation.

Research Organization:
Pennsylvania State Univ., University Park, PA (United States)
Sponsoring Organization:
USDOE
Grant/Contract Number:
FG02-94ER20137
OSTI ID:
1194070
Journal Information:
Frontiers in Microbiology, Vol. 06, Issue 5; ISSN 1664-302X
Publisher:
Frontiers Research FoundationCopyright Statement
Country of Publication:
United States
Language:
English
Citation Metrics:
Cited by: 44 works
Citation information provided by
Web of Science

References (31)

Carbon Metabolic Pathways in Phototrophic Bacteria and Their Broader Evolutionary Implications journal January 2011
Diversity and abundance ofBacteria andArchaea in the Bor Khlueng Hot Spring in Thailand journal December 2004
Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses journal October 2007
Chloracidobacterium thermophilum gen. nov., sp. nov.: an anoxygenic microaerophilic chlorophotoheterotrophic acidobacterium journal February 2015
Highly diverse community structure in a remote central Tibetan geothermal spring does not display monotonic variation to thermal stress: Microbial diversity and thermal stress journal July 2006
Phototrophic Phylotypes Dominate Mesothermal Microbial Mats Associated with Hot Springs in Yellowstone National Park journal February 2012
Characterization of the FMO protein from the aerobic chlorophototroph, Candidatus Chloracidobacterium thermophilum journal January 2010
Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms journal April 2015
Functional type 2 photosynthetic reaction centers found in the rare bacterial phylum Gemmatimonadetes journal May 2014
Carbohydrate Metabolism and Carbon Fixation in Roseobacter denitrificans OCh114 journal October 2009
Bar-Coded Pyrosequencing Reveals Shared Bacterial Community Properties along the Temperature Gradients of Two Alkaline Hot Springs in Yellowstone National Park journal May 2009
‘Candidatus Thermochlorobacter aerophilum:’ an aerobic chlorophotoheterotrophic member of the phylum Chlorobi defined by metagenomics and metatranscriptomics journal March 2012
Metatranscriptomic analyses of chlorophototrophs of a hot-spring microbial mat journal June 2011
Isolation and Characterization of Soil Bacteria That Define Terriglobus gen. nov., in the Phylum Acidobacteria journal February 2007
Isolation and Characterization of Homodimeric Type-I Reaction Center Complex from Candidatus Chloracidobacterium thermophilum, an Aerobic Chlorophototroph journal December 2011
Bacterial community composition in thermophilic microbial mats from five hot springs in central Tibet journal November 2008
Candidatus Chloracidobacterium thermophilum: An Aerobic Phototrophic Acidobacterium journal July 2007
In situ dynamics of O2, pH and cyanobacterial transcripts associated with CCM, photosynthesis and detoxification of ROS journal August 2010
Pyrinomonas methylaliphatogenes gen. nov., sp. nov., a novel group 4 thermophilic member of the phylum Acidobacteria from geothermal soils journal September 2013
Complete genome of Candidatus Chloracidobacterium thermophilum, a chlorophyll-based photoheterotroph belonging to the phylum Acidobacteria: Candidatus Chloracidobacterium thermophilum genome journal September 2011
Blastocatella fastidiosa gen. nov., sp. nov., isolated from semiarid savanna soil – The first described species of Acidobacteria subdivision 4 journal March 2013
Structural model and spectroscopic characteristics of the FMO antenna protein from the aerobic chlorophototroph, Candidatus Chloracidobacterium thermophilum journal January 2011
Toward an Ecological Classification of soil Bacteria journal June 2007
Wide Distribution and Diversity of Members of the Bacterial Kingdom Acidobacterium in the Environment journal April 1999
Green Bacteria book January 2011
Pyrinomonas methylaliphatogenes gen. nov., sp. nov., a novel group 4 thermophilic member of the phylum Acidobacteria from geothermal soils journal March 2014
Aridibacter famidurans gen. nov., sp. nov. and Aridibacter kavangonensis sp. nov., two novel members of subdivision 4 of the Acidobacteria isolated from semiarid savannah soil journal February 2014
Influence of Light on Carbon Utilization in Aerobic Anoxygenic Phototrophs journal August 2012
Formation and Fate of Fermentation Products in Hot Spring Cyanobacterial Mats journal January 1987
Effect of Temperature and Light on Growth of and Photosynthesis by Synechococcus Isolates Typical of Those Predominating in the Octopus Spring Microbial Mat Community of Yellowstone National Park journal January 2006
Ultrastructural Analysis and Identification of Envelope Proteins of "Candidatus Chloracidobacterium thermophilum" Chlorosomes journal September 2011

Cited By (19)

Emended description of the genus Tabrizicola and the species Tabrizicola aquatica as aerobic anoxygenic phototrophic bacteria journal March 2019
Evidence for the presence of key chlorophyll-biosynthesis-related proteins in the genus Rubrobacter (Phylum Actinobacteria) and its implications for the evolution and origin of photosynthesis journal July 2015
15N photo-CIDNP MAS NMR analysis of reaction centers of Chloracidobacterium thermophilum journal March 2018
Reaction centers of the thermophilic microaerophile, Chloracidobacterium thermophilum (Acidobacteria) I: biochemical and biophysical characterization journal June 2019
A niche for cyanobacteria producing chlorophyll f within a microbial mat journal June 2017
Photovoltaic concepts inspired by coherence effects in photosynthetic systems journal December 2016
How nature designs light-harvesting antenna systems: design principles and functional realization in chlorophototrophic prokaryotes journal January 2018
A physiological perspective on the origin and evolution of photosynthesis journal November 2017
Refining the taxonomic structure of the phylum Acidobacteria journal December 2018
Deterministic influences exceed dispersal effects on hydrologically-connected microbiomes: Deterministic assembly of hyporheic microbiomes journal March 2017
Metagenomics of an Alkaline Hot Spring in Galicia (Spain): Microbial Diversity Analysis and Screening for Novel Lipolytic Enzymes journal November 2015
The Ecology of Acidobacteria: Moving beyond Genes and Genomes journal May 2016
Draft Genome Sequence of the Photoheterotrophic Chloracidobacterium thermophilum Strain OC1 Found in a Mat at Ojo Caliente journal February 2016
Anoxygenic Phototrophs Span Geochemical Gradients and Diverse Morphologies in Terrestrial Geothermal Springs journal December 2019
Diel metabolomics analysis of a hot spring chlorophototrophic microbial mat leads to new hypotheses of community member metabolisms journal April 2015
The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat journal June 2015
The molecular dimension of microbial species: 2. Synechococcus strains representative of putative ecotypes inhabiting different depths in the Mushroom Spring microbial mat exhibit different adaptive and acclimative responses to light journal June 2015
Natural and Synthetic Variants of the Tricarboxylic Acid Cycle in Cyanobacteria: Introduction of the GABA Shunt into Synechococcus sp. PCC 7002 journal December 2016
The Dark Side of the Mushroom Spring Microbial Mat: Life in the Shadow of Chlorophototrophs. II. Metabolic Functions of Abundant Community Members Predicted from Metagenomic Analyses journal June 2017