Complete genome sequence of Streptosporangium roseum type strain (NI 9100T)

Journal Article · Fri Jan 01 00:00:00 EST 2010 · Standards in Genomic Sciences

DOI:https://doi.org/10.4056/sigs.631049· OSTI ID:981799

Nolan, Matt ^[1]; Sikorski, Johannes ^[2]; Jando, Marlen ^[2]; Lucas, Susan ^[1]; Lapidus, Alla L. ^[1]; Glavina Del Rio, Tijana ^[1]; Chen, Feng ^[1]; Tice, Hope ^[1]; Pitluck, Sam ^[1]; Cheng, Jan-Fang ^[1]; Chertkov, Olga ^[3]; Sims, David ^[3]; Meincke, Linda ^[3]; Brettin, Thomas S ^[4]; Han, Cliff ^[3]; Detter, J. Chris ^[1]; Bruce, David ^[3]; Goodwin, Lynne A. ^[3]; Land, Miriam L ^[4]; Hauser, Loren John ^[4] ; Chang, Yun-Juan ^[4]; Jeffries, Cynthia ^[5]; Ivanova, N ^[1]; Mavromatis, K ^[1]; Mikhailova, Natalia ^[1]; Chen, Amy ^[1]; Palaniappan, Krishna ^[1]; Chain, Patrick S. G. ^[6]; Rohde, Manfred ^[7]; Goker, Markus ^[2]; Bristow, James ^[1]; Eisen, Jonathan ^[1]; Markowitz, Victor ^[1]; Hugenholtz, Philip ^[1]; Kyrpides, Nikos C ^[1]; Klenk, Hans-Peter ^[2]

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1. U.S. Department of Energy, Joint Genome Institute
2. DSMZ - German Collection of Microorganisms and Cell Cultures GmbH, Braunschweig, Germany
3. Los Alamos National Laboratory (LANL)
4. ORNL
5. Oak Ridge National Laboratory (ORNL)
6. Lawrence Livermore National Laboratory (LLNL)
7. HZI - Helmholtz Centre for Infection Research, Braunschweig, Germany

Streptosporangium roseum Crauch 1955 is the type strain of the species which is the type species of the genus Streptosporangium. The pinkish coiled Streptomyces-like organism with a spore case was isolated from vegetable garden soil in 1955. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of a member of the family Streptosporangiaceae, and the second largest microbial genome sequence ever deciphered. The 10,369,518 bp long genome with its 9421 protein-coding and 80 RNA genes is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

• Research Organization: Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
• Sponsoring Organization: Work for Others (WFO)
• DOE Contract Number: DE-AC05-00OR22725
• OSTI ID: 981799
• Journal Information: Standards in Genomic Sciences, Vol. 2, Issue 1; ISSN 1944-3277
• Country of Publication: United States
• Language: English

Related Subjects

59 BASIC BIOLOGICAL SCIENCES
54 ENVIRONMENTAL SCIENCES
99 GENERAL AND MISCELLANEOUS//MATHEMATICS, COMPUTING, AND INFORMATION SCIENCE
BACTERIA
GENES
RNA
SOILS
SPORES
STRAINS
VEGETABLES
Sporangia
vegetative and aerial mycelia
aerobic
non-motile
non-motile spores
Gram-positive
Streptosporangiaceae
S. cloviforme