Enabling high-throughput data management systems biology: The Bioinformatics Resource Manager

Journal Article · Sun Feb 25 00:00:00 EST 2007 · Bioinformatics, 23(7):906-909

DOI:https://doi.org/10.1093/bioinformatics/btm031· OSTI ID:903457

Shah, Anuj R; Singhal, Mudita; Klicker, Kyle R; Stephan, Eric G; Wiley, H S; Waters, Katrina M

The Bioinformatics Resource Manager (BRM) is a problem-solving environment that provides the user with data retrieval, management, analysis and visualization capabilities through all aspects of an experimental study. Designed in collaboration with biologists, BRM simplifies the integration of experimental data across platforms and with other publicly available information from external data sources. An analysis pipeline is facilitated within BRM by the seamless connectivity of user data with visual analytics tools, through reformatting of the data for easy import. BRM is developed using JAVATM and other open source technologies so that it can be freely distributable.

• Research Organization: Pacific Northwest National Lab. (PNNL), Richland, WA (United States)
• Sponsoring Organization: USDOE
• DOE Contract Number: AC05-76RL01830
• OSTI ID: 903457
• Report Number(s): PNNL-SA-49327; TRN: US200722%%166
• Journal Information: Bioinformatics, 23(7):906-909, Vol. 23, Issue 7
• Country of Publication: United States
• Language: English

Related Subjects

99 GENERAL AND MISCELLANEOUS//MATHEMATICS, COMPUTING, AND INFORMATION SCIENCE
BIOLOGY
DATA BASE MANAGEMENT
DATA ANALYSIS
INFORMATION SYSTEMS
INFORMATION RETRIEVAL