A Non-Stem-Loop CRISPR RNA Is Processed by Dual Binding Cas6

Shao, Yaming; Richter, Hagen; Sun, Shengfang; Sharma, Kundan; Urlaub, Henning; Randau, Lennart; Li, Hong

doi:10.1016/j.str.2016.02.009

Title: A Non-Stem-Loop CRISPR RNA Is Processed by Dual Binding Cas6

Journal Article · Fri Apr 01 00:00:00 EDT 2016 · Structure

DOI:https://doi.org/10.1016/j.str.2016.02.009· OSTI ID:1349762

Shao, Yaming; Richter, Hagen; Sun, Shengfang; Sharma, Kundan; Urlaub, Henning; Randau, Lennart; Li, Hong

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Research Organization:: Argonne National Laboratory (ANL), Argonne, IL (United States)

Sponsoring Organization:: USDOE Office of Science (SC), Basic Energy Sciences (BES); National Institutes of Health (NIH)

Grant/Contract Number:: W-31-109-Eng-38; R01 GM99604

OSTI ID:: 1349762

Alternate ID(s):: OSTI ID: 1247354; OSTI ID: 1337423

Journal Information:: Structure, Journal Name: Structure Vol. 24 Journal Issue: 4; ISSN 0969-2126

Publisher:: ElsevierCopyright Statement

Country of Publication:: United Kingdom

Language:: English

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Cited by: 16 works

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References (19)

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Evolutionary conservation of sequence and secondary structures in CRISPR repeats Kunin, Victor; Sorek, Rotem; Hugenholtz, Philip Genome Biology, Vol. 8, Issue 4 https://doi.org/10.1186/gb-2007-8-4-r61	journal	January 2007
Unravelling the structural and mechanistic basis of CRISPR–Cas systems van der Oost, John; Westra, Edze R.; Jackson, Ryan N. Nature Reviews Microbiology, Vol. 12, Issue 7 https://doi.org/10.1038/nrmicro3279	journal	June 2014
Bovine Pancreatic Ribonuclease: Fifty Years of the First Enzymatic Reaction Mechanism Cuchillo, Claudi M.; Nogués, M. Victòria; Raines, Ronald T. Biochemistry, Vol. 50, Issue 37 https://doi.org/10.1021/bi201075b	journal	September 2011
CRISPRmap: an automated classification of repeat conservation in prokaryotic adaptive immune systems Lange, Sita J.; Alkhnbashi, Omer S.; Rose, Dominic Nucleic Acids Research, Vol. 41, Issue 17 https://doi.org/10.1093/nar/gkt606	journal	July 2013
Characterization of CRISPR RNA processing in Clostridium thermocellum and Methanococcus maripaludis Richter, Hagen; Zoephel, Judith; Schermuly, Jeanette Nucleic Acids Research, Vol. 40, Issue 19, p. 9887-9896 https://doi.org/10.1093/nar/gks737	journal	August 2012
RNA-guided genetic silencing systems in bacteria and archaea Wiedenheft, Blake; Sternberg, Samuel H.; Doudna, Jennifer A. Nature, Vol. 482, Issue 7385, p. 331-338 https://doi.org/10.1038/nature10886	journal	February 2012
Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins Kramer, Katharina; Sachsenberg, Timo; Beckmann, Benedikt M. Nature Methods, Vol. 11, Issue 10 https://doi.org/10.1038/nmeth.3092	journal	August 2014
Structural Principles of CRISPR RNA Processing Li, Hong Structure, Vol. 23, Issue 1 https://doi.org/10.1016/j.str.2014.10.006	journal	January 2015
Comparative analysis of Cas6b processing and CRISPR RNA stability Richter, Hagen; Lange, Sita J.; Backofen, Rolf RNA Biology, Vol. 10, Issue 5 https://doi.org/10.4161/rna.23715	journal	February 2013
Molecular mechanisms of CRISPR-mediated microbial immunity Gasiunas, Giedrius; Sinkunas, Tomas; Siksnys, Virginijus Cellular and Molecular Life Sciences, Vol. 71, Issue 3 https://doi.org/10.1007/s00018-013-1438-6	journal	August 2013
Features and development of Coot Emsley, P.; Lohkamp, B.; Scott, W. G. Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 4 https://doi.org/10.1107/S0907444910007493	journal	March 2010
CRISPR-Cas Systems: Prokaryotes Upgrade to Adaptive Immunity Barrangou, Rodolphe; Marraffini, Luciano A. Molecular Cell, Vol. 54, Issue 2 https://doi.org/10.1016/j.molcel.2014.03.011	journal	April 2014
Recognition and Cleavage of a Nonstructured CRISPR RNA by Its Processing Endoribonuclease Cas6 Shao, Yaming; Li, Hong Structure, Vol. 21, Issue 3 https://doi.org/10.1016/j.str.2013.01.010	journal	March 2013
Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes Carte, J.; Wang, R.; Li, H. Genes & Development, Vol. 22, Issue 24 https://doi.org/10.1101/gad.1742908	journal	December 2008
CRISPR interference: a structural perspective Reeks, Judith; Naismith, James H.; White, Malcolm F. Biochemical Journal, Vol. 453, Issue 2 https://doi.org/10.1042/BJ20130316	journal	June 2013
PHENIX: a comprehensive Python-based system for macromolecular structure solution Adams, Paul D.; Afonine, Pavel V.; Bunkóczi, Gábor Acta Crystallographica Section D Biological Crystallography, Vol. 66, Issue 2, p. 213-221 https://doi.org/10.1107/S0907444909052925	journal	January 2010
Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and Cleavage Wang, Ruiying; Preamplume, Gan; Terns, Michael P. Structure, Vol. 19, Issue 2 https://doi.org/10.1016/j.str.2010.11.014	journal	February 2011
The impact of CRISPR repeat sequence on structures of a Cas6 protein-RNA complex Wang, Ruiying; Zheng, Han; Preamplume, Gan Protein Science, Vol. 21, Issue 3 https://doi.org/10.1002/pro.2028	journal	February 2012

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Title: A Non-Stem-Loop CRISPR RNA Is Processed by Dual Binding Cas6

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