Analysis of the Genetic Variation in Growth, Ecophysiology, and Chemical and Metabolomic Composition of Wood of Populus trichocarpa Provenances

Guerra, Fernando P.; Richards, James H.; Fiehn, Oliver; Famula, Randi; Stanton, Brian J.; Shuren, Richard; Sykes, Robert; Davis, Mark F.; Neale, David B.

doi:10.1007/s11295-015-0965-8

Title: Analysis of the Genetic Variation in Growth, Ecophysiology, and Chemical and Metabolomic Composition of Wood of Populus trichocarpa Provenances

Journal Article · Mon Feb 01 00:00:00 EST 2016 · Tree Genetics & Genomes

DOI:https://doi.org/10.1007/s11295-015-0965-8· OSTI ID:1236670

Guerra, Fernando P.; Richards, James H.; Fiehn, Oliver; Famula, Randi; Stanton, Brian J.; Shuren, Richard; Sykes, Robert; Davis, Mark F.; Neale, David B.

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Research Organization:: National Renewable Energy Laboratory (NREL), Golden, CO (United States)

Sponsoring Organization:: USDA National Institute of Food and Agriculture

DOE Contract Number:: AC36-08GO28308

OSTI ID:: 1236670

Report Number(s):: NREL/JA-5100-65756

Journal Information:: Tree Genetics & Genomes, Vol. 12, Issue 6; Related Information: Tree Genetics and Genomes; ISSN 1614-2942

Publisher:: Springer Nature

Country of Publication:: United States

Language:: English

References (45)

Plant cell wall reconstruction toward improved lignocellulosic production and processability Abramson, Miron; Shoseyov, Oded; Shani, Ziv Plant Science, Vol. 178, Issue 2, p. 61-72 https://doi.org/10.1016/j.plantsci.2009.11.003	journal	February 2010
Growth and production of a short rotation coppice culture of poplar. II. Clonal and year-to-year differences in leaf and petiole characteristics and stand leaf area index Al Afas, N.; Pellis, A.; Niinemets, Ü Biomass and Bioenergy, Vol. 28, Issue 6 https://doi.org/10.1016/j.biombioe.2004.11.010	journal	June 2005
under dependency Yekutieli, Daniel; Benjamini, Yoav The Annals of Statistics, Vol. 29, Issue 4 https://doi.org/10.1214/aos/1013699998	journal	August 2001
Leaf proteome analysis of eight Populus ×euramericana genotypes: Genetic variation in drought response and in water-use efficiency involves photosynthesis-related proteins Bonhomme, Ludovic; Monclus, Romain; Vincent, Delphine PROTEOMICS, Vol. 9, Issue 17 https://doi.org/10.1002/pmic.200900047	journal	August 2009
Variation in Lignin Content and Composition (Mechanisms of Control and Implications for the Genetic Improvement of Plants) Campbell, M. M.; Sederoff, R. R. Plant Physiology, Vol. 110, Issue 1 https://doi.org/10.1104/pp.110.1.3	journal	January 1996
Breeding for high water-use efficiency Condon, A. G. Journal of Experimental Botany, Vol. 55, Issue 407 https://doi.org/10.1093/jxb/erh277	journal	September 2004
Glutamine, arginine and the amino acid transporter Pt-CAT11 play important roles during senescence in poplar Couturier, Jérémy; Doidy, Joan; Guinet, Frédéric Annals of Botany, Vol. 105, Issue 7 https://doi.org/10.1093/aob/mcq047	journal	March 2010
Intra-annual cambial activity and carbon availability in stem of poplar Deslauriers, A.; Giovannelli, A.; Rossi, S. Tree Physiology, Vol. 29, Issue 10 https://doi.org/10.1093/treephys/tpp061	journal	August 2009
Genomic regions involved in productivity of two interspecific poplar families in Europe. 1. Stem height, circumference and volume Dillen, Sophie Y.; Storme, Véronique; Marron, Nicolas Tree Genetics & Genomes, Vol. 5, Issue 1 https://doi.org/10.1007/s11295-008-0175-8	journal	September 2008
Genetic Variation of Stomatal Traits and Carbon Isotope Discrimination in Two Hybrid Poplar Families (Populus deltoides ‘S9-2’ × P. nigra ‘Ghoy’ and P. deltoides ‘S9-2’ × P. trichocarpa ‘V24’) Dillen, Sophie Y.; Marron, Nicolas; Koch, Barbra Annals of Botany, Vol. 102, Issue 3 https://doi.org/10.1093/aob/mcn107	journal	June 2008
Growth and Physiology Dillen, Sophie Y.; Rood, Stewart B.; Ceulemans, Reinhart Genetics and Genomics of Populus https://doi.org/10.1007/978-1-4419-1541-2_3	book	December 2009
Genetic Improvement of Poplar Feedstock Quality for Ethanol Production Dinus, Ronald J. Applied Biochemistry and Biotechnology, Vol. 91-93, Issue 1-9 https://doi.org/10.1385/ABAB:91-93:1-9:23	journal	January 2001
The physiological basis for genetic variation in water use efficiency and carbon isotope composition in Arabidopsis thaliana Easlon, Hsien Ming; Nemali, Krishna S.; Richards, James H. Photosynthesis Research, Vol. 119, Issue 1-2 https://doi.org/10.1007/s11120-013-9891-5	journal	July 2013
Association genetics of the loblolly pine (Pinus taeda, Pinaceae) metabolome Eckert, Andrew J.; Wegrzyn, Jill L.; Cumbie, W. Patrick New Phytologist, Vol. 193, Issue 4 https://doi.org/10.1111/j.1469-8137.2011.03976.x	journal	November 2011
Why and How Populus Became a "Model Tree" Ellis, Brian; Jansson, Stefan; Strauss, Steven H. Genetics and Genomics of Populus https://doi.org/10.1007/978-1-4419-1541-2_1	book	January 2010
On the Relationship Between Carbon Isotope Discrimination and the Intercellular Carbon Dioxide Concentration in Leaves Farquhar, Gd; O'Leary, Mh; Berry, Ja Functional Plant Biology, Vol. 9, Issue 2 https://doi.org/10.1071/PP9820121	journal	January 1982
Isotopic Composition of Plant Carbon Correlates With Water-Use Efficiency of Wheat Genotypes Farquhar, Gd; Richards, Ra Functional Plant Biology, Vol. 11, Issue 6 https://doi.org/10.1071/PP9840539	journal	January 1984
Carbon Isotope Discrimination and Photosynthesis Farquhar, G. D.; Ehleringer, J. R.; Hubick, K. T. Annual Review of Plant Physiology and Plant Molecular Biology, Vol. 40, Issue 1, p. 503-537 https://doi.org/10.1146/annurev.pp.40.060189.002443	journal	June 1989
Association genetics of chemical wood properties in black poplar ( Populus nigra ) Guerra, Fernando P.; Wegrzyn, Jill L.; Sykes, Robert New Phytologist, Vol. 197, Issue 1 https://doi.org/10.1111/nph.12003	journal	November 2012
Production physiology of three fast-growing hardwood species along a soil resource gradient Henderson, D. E.; Jose, S. Tree Physiology, Vol. 25, Issue 12 https://doi.org/10.1093/treephys/25.12.1487	journal	December 2005
A transcriptional roadmap to wood formation Hertzberg, M.; Aspeborg, H.; Schrader, J. Proceedings of the National Academy of Sciences, Vol. 98, Issue 25 https://doi.org/10.1073/pnas.261293398	journal	November 2001
Variation in juvenile traits of natural black poplar (Populus nigra L.) clones in Turkey Isik, Fikret; Toplu, Ferit New Forests, Vol. 27, Issue 2, p. 175-187 https://doi.org/10.1023/A:1025071515826	journal	January 2004
Chemical Profiles of Wood Components of Poplar Clones for Their Energy Utilization Kačík, František; Ďurkovič, Jaroslav; Kačíková, Danica Energies, Vol. 5, Issue 12 https://doi.org/10.3390/en5125243	journal	December 2012
Growth and production of a short rotation coppice culture of poplar. III. Second rotation results Laureysens, Ilse; Pellis, An; Willems, Jessy Biomass and Bioenergy, Vol. 29, Issue 1 https://doi.org/10.1016/j.biombioe.2005.02.005	journal	July 2005
Plasticity of growth and sylleptic branchiness in two poplar families grown at three sites across Europe Marron, N.; Bastien, C.; Sabatti, M. Tree Physiology, Vol. 26, Issue 7 https://doi.org/10.1093/treephys/26.7.935	journal	July 2006
Geographical and environmental gradients shape phenotypic trait variation and genetic structure in Populus trichocarpa McKown, Athena D.; Guy, Robert D.; Klápště, Jaroslav New Phytologist, Vol. 201, Issue 4 https://doi.org/10.1111/nph.12601	journal	November 2013
Ecophysiology of short rotation forest crops Mitchell, C. P. Biomass and Bioenergy, Vol. 2, Issue 1-6 https://doi.org/10.1016/0961-9534(92)90085-5	journal	January 1992
Productivity, leaf traits and carbon isotope discrimination in 29 Populus deltoides × P. nigra clones Monclus, Romain; Dreyer, Erwin; Delmotte, Francis M. New Phytologist, Vol. 167, Issue 1 https://doi.org/10.1111/j.1469-8137.2005.01407.x	journal	March 2005
Productivity, water-use efficiency and tolerance to moderate water deficit correlate in 33 poplar genotypes from a Populus deltoides x Populus trichocarpa F1 progeny Monclus, R.; Villar, M.; Barbaroux, C. Tree Physiology, Vol. 29, Issue 11 https://doi.org/10.1093/treephys/tpp075	journal	September 2009
Transcription Factors in Poplar Growth and Development Brunner, Amy M.; Beers, Eric P. Genetics, Genomics and Breeding of Poplar https://doi.org/10.1201/b10819-14	book	March 2011
Bud set in poplar - genetic dissection of a complex trait in natural and hybrid populations Rohde, Antje; Storme, Véronique; Jorge, Véronique New Phytologist, Vol. 189, Issue 1 https://doi.org/10.1111/j.1469-8137.2010.03469.x	journal	October 2010
Seasonal variation of amino acids in the xylem sap of “Populus x canadensis” and its relation to protein body mobilization Sauter, Jörg J.; van Cleve, Barbara Trees, Vol. 7, Issue 1 https://doi.org/10.1007/BF00225228	journal	November 1992
Storage, mobilization and interrelations of starch, sugars, protein and fat in the ray storage tissue of poplar trees Sauter, Jörg J.; van Cleve, Barbara Trees, Vol. 8, Issue 6 https://doi.org/10.1007/BF00202674	journal	September 1994
Production physiology and morphology of Populus species and their hybrids grown under short rotation. II. Biomass components and harvest index of hybrid and parental species clones Scaracia-Mugnozza, G. E.; Ceulemans, R.; Heilman, P. E. Canadian Journal of Forest Research, Vol. 27, Issue 3 https://doi.org/10.1139/x96-180	journal	March 1997
ANOVA-simultaneous component analysis (ASCA): a new tool for analyzing designed metabolomics data Smilde, A. K.; Jansen, J. J.; Hoefsloot, H. C. J. Bioinformatics, Vol. 21, Issue 13 https://doi.org/10.1093/bioinformatics/bti476	journal	May 2005
Enhanced assimilation rate and water use efficiency with latitude through increased photosynthetic capacity and internal conductance in balsam poplar ( Populus balsamifera L.) Soolanayakanahally, Raju Y.; Guy, Robert D.; Silim, Salim N. Plant, Cell & Environment, Vol. 32, Issue 12 https://doi.org/10.1111/j.1365-3040.2009.02042.x	journal	December 2009
Plant genetic engineering for biofuel production: towards affordable cellulosic ethanol Sticklen, Mariam B. Nature Reviews Genetics, Vol. 9, Issue 6 https://doi.org/10.1038/nrg2336	journal	June 2008
The Ascorbate-glutathione-α-tocopherol Triad in Abiotic Stress Response Szarka, András; Tomasskovics, Bálint; Bánhegyi, Gábor International Journal of Molecular Sciences, Vol. 13, Issue 4 https://doi.org/10.3390/ijms13044458	journal	April 2012
Association genetics of traits controlling lignin and cellulose biosynthesis in black cottonwood (Populus trichocarpa, Salicaceae) secondary xylem Wegrzyn, Jill L.; Eckert, Andrew J.; Choi, Minyoung New Phytologist, Vol. 188, Issue 2 https://doi.org/10.1111/j.1469-8137.2010.03415.x	journal	September 2010
MetaboAnalyst 2.0--a comprehensive server for metabolomic data analysis Xia, J.; Mandal, R.; Sinelnikov, I. V. Nucleic Acids Research, Vol. 40, Issue W1 https://doi.org/10.1093/nar/gks374	journal	May 2012
Biomass equations and carbon content of aboveground leafless biomass of hybrid poplar in Coastal British Columbia Zabek, L. M.; Prescott, C. E. Forest Ecology and Management, Vol. 223, Issue 1-3 https://doi.org/10.1016/j.foreco.2005.11.009	journal	March 2006
The use of linear mixed model theory for the genetic analysis of repeated measures from clonal tests of forest trees. I. A focus on spatially repeated data Zamudio, Francisco; Wolfinger, Russ; Stanton, Brian Tree Genetics & Genomes, Vol. 4, Issue 2 https://doi.org/10.1007/s11295-007-0110-4	journal	August 2007
Physiological and growth responses of Populus davidiana ecotypes to different soil water contents Zhang, X.; Wu, N.; Li, C. Journal of Arid Environments, Vol. 60, Issue 4 https://doi.org/10.1016/j.jaridenv.2004.07.008	journal	March 2005
Foliar Carbon Isotope Composition (δ 13C) and Water Use Efficiency of Different Populus deltoids Clones Under Water Stress Zhao, Fengjun; Gao, Rongfu; Shen, Yingbai Frontiers of Forestry in China, Vol. 1, Issue 1 https://doi.org/10.1007/s11461-005-0005-1	journal	January 2006
Sunflower as a biofuels crop: An analysis of lignocellulosic chemical properties Ziebell, Angela L.; Barb, Jessica G.; Sandhu, Sukhpreet Biomass and Bioenergy, Vol. 59 https://doi.org/10.1016/j.biombioe.2013.06.009	journal	December 2013

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37 INORGANIC, ORGANIC, PHYSICAL, AND ANAYLYTICAL CHEMISTRY
Populus trichocarpa
growth stable isotopes
lignin
cellulose
wood metabolome

Title: Analysis of the Genetic Variation in Growth, Ecophysiology, and Chemical and Metabolomic Composition of Wood of Populus trichocarpa Provenances

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