EGVII endoglucanase and nucleic acids encoding the same

Dunn-Coleman, Nigel; Goedegebuur, Frits; Ward, Michael; Yao, Jian

Title: EGVII endoglucanase and nucleic acids encoding the same

Patent · Tue Apr 14 00:00:00 EDT 2015

OSTI ID:1178008

Dunn-Coleman, Nigel; Goedegebuur, Frits; Ward, Michael; Yao, Jian

The present invention provides a novel endoglucanase nucleic acid sequence, designated egl7, and the corresponding EGVII amino acid sequence. The invention also provides expression vectors and host cells comprising a nucleic acid sequence encoding EGVII, recombinant EGVII proteins and methods for producing the same.

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Research Organization:: National Renewable Energy Laboratory (NREL), Golden, CO (United States)

Sponsoring Organization:: USDOE

DOE Contract Number:: AC36-99GO10337

Assignee:: Danisco US Inc. (Palo Alto, CA)

Patent Number(s):: 9,005,948

Application Number:: 14/159,044

OSTI ID:: 1178008

Resource Relation:: Patent File Date: 2014 Jan 20

Country of Publication:: United States

Language:: English

References (76)

Detergent cellulase Barbesgaard, Peder O.; Jensen, Georg W.; Holm, Poul Jørgen https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/4435307 US Patent Document 4,435,307	patent	March 1984
Recombinant immunoglobin preparations Cabilly, Shmuel; Heyneker, Herbert L.; Holmes, William E. https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/4816567 US Patent Document 4,816,567	patent	March 1989
Detergent composition for clothing incorporating a cellulase Suzuki, Akira; Ito, Susumu; Okamoto, Kikuhiko https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/4822516 US Patent Document 4,822,516	patent	April 1989
DNA sequence encoding endoglucanase III cellulase Ward, Michael; Clarkson, Kathleen A.; Larenas, Edmund https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5475101 US Patent Document 5,475,101	patent	December 1995
Ethanol production by recombinant hosts Fowler, David E.; Horton, Philip G.; Ben-Bassat, Arie https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5487989 US Patent Document 5,487,989	patent	January 1996
Methods for reducing the harshness of a cotton-containing fabric Schulein, Martin; Levring, Kirsten B. o. slashed. egh https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5648263 US Patent Document 5,648,263	patent	July 1997
Fungal cellulase composition containing alkaline CMC-endoglucanase and essentially no cellobiohydrolase Schulein, Martin; Levring, Kirsten B. o. slashed. egh https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5691178 US Patent Document 5,691,178	patent	November 1997
Fungal cellulase composition containing alkaline CMC-endoglucanase and essentially no cellobiohydrolase and method of making thereof Schulein, Martin; Levring, Kirsten B. o. slashed. egh https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5776757 US Patent Document 5,776,757	patent	July 1998
DNA encoding an enzyme with endoglucanase activity from Trichoderma harzianum Dalb. o. slashed. ge, Henrik; Christgau, Stephan; Andersen, Lene Nonboe https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5817499 US Patent Document 5,817,499	patent	October 1998
Alkaline cellulases von der Osten, Claus; Schulein, Martin https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/5912157 US Patent Document 5,912,157	patent	June 1999
Detergent compositions containing cellulase compositions deficient in CBH I type components Clarkson, Kathleen A.; Larenas, Edward; Shoemaker, Sharon https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/6162782 US Patent Document 6,162,782	patent	December 2000
.beta.-glucosidase coding sequences and protein from orpinomyces PC-2 Li, Xin; Ljungdahl, Lars G.; Chen, Huizhong https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/6184018 US Patent Document 6,184,018	patent	February 2001
EGVII endoglucanase and nucleic acids encoding the same Dunn-Coleman, Nigel; Goedegebuur, Frits; Ward, Michael https://doi.org/https://image-ppubs.uspto.gov/dirsearch-public/print/downloadPdf/7527959 US Patent Document 7,527,959	patent	May 2009
Basic local alignment search tool Altschul, Stephen F.; Gish, Warren; Miller, Webb Journal of Molecular Biology, Vol. 215, Issue 3, p. 403-410 https://doi.org/10.1016/S0022-2836(05)80360-2	journal	October 1990
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Altschul, Stephen F.; Madden, Thomas L.; Schäffer, Alejandro A. Nucleic Acids Research, Vol. 25, Issue 17, p. 3389-3402 https://doi.org/10.1093/nar/25.17.3389	journal	September 1997
ACEII, a Novel Transcriptional Activator Involved in Regulation of Cellulase and Xylanase Genes of Trichoderma reesei Aro, Nina; Saloheimo, Anu; Ilmén, Marja Journal of Biological Chemistry, Vol. 276, Issue 26, p. 24309-24314 https://doi.org/10.1074/jbc.M003624200	journal	April 2001
Current Protocols in Molecular Biology Ausubel, Frederick M.; Brent, Roger; Kingston, Robert E. https://doi.org/10.1002/0471142727	book	May 2001
Cloning and Amplification of the Gene Encoding an Extracellular β-Glucosidase from Trichoderma reesei: Evidence for Improved Rates of Saccharification of Cellulosic Substrates Barnett, Christopher C.; Berka, Randy M.; Fowler, Tim Nature Biotechnology, Vol. 9, Issue 6, p. 562-567 https://doi.org/10.1038/nbt0691-562	journal	June 1991
Viruses and gene silencing in plants Baulcombe, D.; Calisher, Charles H.; Horzinek, M. C. 100 Years of Virology, p. 189-201 https://doi.org/10.1007/978-3-7091-6425-9_14	book	January 1999
Fractionation of cellulase and β-glucosidase in a Trichoderma reesei culture liquid by use of two-phase partitioning Brumbauer, Anikó; Johansson, Göte; Réczey, Kati Bioseparation, Vol. 7, Issue 6, p. 287-295 https://doi.org/10.1023/A:1008153418019	journal	November 1999
Improved oligonudeotide site-directed rautagenesis using M13 vectors Carter, Paul; Bedouelle, Hugues; Winter, Greg Nucleic Acids Research, Vol. 13, Issue 12, p. 4431-4443 https://doi.org/10.1093/nar/13.12.4431	journal	January 1985
Genetically engineered peptide fusions for improved protein partitioning in aqueous two-phase systems Collén, Anna; Ward, Michael; Tjerneld, Folke Journal of Chromatography A, Vol. 910, Issue 2, p. 275-284 https://doi.org/10.1016/S0021-9673(00)01212-7	journal	March 2001
Secretion of Trichoderma reesei β-glucosidase by Saccharomyces cerevisiae Cummings, C.; Fowler, T. Current Genetics, Vol. 29, Issue 3 https://doi.org/10.1007/s002940050040	journal	February 1996
[57] Rethinking your purification procedure Deutscher, Murray P. Guide to Protein Purification https://doi.org/10.1016/0076-6879(90)82059-B	book	January 1990
Analytical separation of Trichoderma reesei cellulases by ion-exchange fast protein liquid chromatography Ellouz, S.; Durand, H.; Tiraby, G. Journal of Chromatography A, Vol. 396, p. 307-317 https://doi.org/10.1016/S0021-9673(01)94068-3	journal	January 1987
A novel genetic system to detect protein–protein interactions Fields, Stanley; Song, Ok-kyu Nature, Vol. 340, Issue 6230, p. 245-246 https://doi.org/10.1038/340245a0	journal	July 1989
Purification and characterization of a β-glucosidase from solid-state cultures of Humicola grisea var. thermoidea Filho, Edivaldo Ximenes Ferreira Canadian Journal of Microbiology, Vol. 42, Issue 1, p. 1-5 https://doi.org/10.1139/m96-001	journal	January 1996
Characterization of cellulases by HPLC separation Fliess, A.; Schügerl, K. European Journal of Applied Microbiology and Biotechnology, Vol. 17, Issue 5, p. 314-318 https://doi.org/10.1007/BF00508028	journal	January 1983
Characteristics of fungal cellulases Goyal, Anil; Ghosh, Bijan; Eveleigh, Douglas Bioresource Technology, Vol. 36, Issue 1, p. 37-50 https://doi.org/10.1016/0960-8524(91)90098-5	journal	January 1991
Cloning, sequencing and overexpression of a Rhodothermus marinus gene encoding a thermostable cellulase of glycosyl hydrolase family 12 Halldórsdóttir, S.; Thórólfsdót, E. T.; Spilliaert, R. Applied Microbiology and Biotechnology, Vol. 49, Issue 3, p. 277-284 https://doi.org/10.1007/s002530051169	journal	March 1998
New families in the classification of glycosyl hydrolases based on amino acid sequence similarities Henrissat, B.; Bairoch, A. Biochemical Journal, Vol. 293, Issue 3, p. 781-788 https://doi.org/10.1042/bj2930781	journal	August 1993
Purification and properties of an extracellular β-glucosidase from Lenzites trabea Herr, D.; Baumer, F.; Dellweg, H. European Journal of Applied Microbiology and Biotechnology, Vol. 5, Issue 1, p. 29-36 https://doi.org/10.1007/BF00515684	journal	January 1978
Antibodies specific for the human retinoblastoma protein identify a family of related polypeptides. Hu, Q. J.; Bautista, C.; Edwards, G. M. Molecular and Cellular Biology, Vol. 11, Issue 11, p. 5792-5799 https://doi.org/10.1128/MCB.11.11.5792	journal	November 1991
Production of Antigen-Specific Human Antibodies from Mice Engineered with Human Heavy and Light Chain YACs Jakobovits, Aya; Green, Larry L.; Hardy, Margaret C. Annals of the New York Academy of Sciences, Vol. 764, Issue 1, p. 525-535 https://doi.org/10.1111/j.1749-6632.1995.tb55878.x	journal	September 1995
Replacing the complementarity-determining regions in a human antibody with those from a mouse Jones, Peter T.; Dear, Paul H.; Foote, Jefferson Nature, Vol. 321, Issue 6069, p. 522-525 https://doi.org/10.1038/321522a0	journal	May 1986
The First Structure of a Glycoside Hydrolase Family 61 Member, Cel61B from Hypocrea jecorina, at 1.6 Å Resolution Karkehabadi, Saeid; Hansson, Henrik; Kim, Steve Journal of Molecular Biology, Vol. 383, Issue 1, p. 144-154 https://doi.org/10.1016/j.jmb.2008.08.016	journal	October 2008
Cloning and sequencing of the cDNA encoding β-glucosidase 1 from Aspergillus aculeatus Kawaguchi, Takashi; Enoki, Tatsuji; Tsurumaki, Shinji Gene, Vol. 173, Issue 2, p. 287-288 https://doi.org/10.1016/0378-1119(96)00179-5	journal	September 1996
Cellulase families and their genes Knowles, Jonathan; Lehtovaara, Päivi; Teeri, Tuula Trends in Biotechnology, Vol. 5, Issue 9, p. 255-261 https://doi.org/10.1016/0167-7799(87)90102-8	journal	September 1987
Continuous cultures of fused cells secreting antibody of predefined specificity Köhler, G.; Milstein, C. Nature, Vol. 256, Issue 5517, p. 495-497 https://doi.org/10.1038/256495a0	journal	August 1975
Simultaneous saccharification and fermentation of lignocellulosic wastes to ethanol using a thermotolerant yeast Hari Krishna, S.; Janardhan Reddy, T.; Chowdary, G. V. Bioresource Technology, Vol. 77, Issue 2, p. 193-196 https://doi.org/10.1016/S0960-8524(00)00151-6	journal	April 2001
Directed immobilization of recombinant staphylococci on cotton fibers by functional display of a fungal cellulose-binding domain Lehtio, Janne; Wernerus, Henrik; Samuelson, Patrik FEMS Microbiology Letters, Vol. 195, Issue 2, p. 197-204 https://doi.org/10.1111/j.1574-6968.2001.tb10521.x	journal	February 2001
Isolation and partial characterization of cellulose-degrading strain of Streptomyces sp. LX from soil Li, X.; Gao, P. Letters in Applied Microbiology, Vol. 22, Issue 3, p. 209-213 https://doi.org/10.1111/j.1472-765X.1996.tb01145.x	journal	March 1996
A beta 3 integrin mutation abolishes ligand binding and alters divalent cation-dependent conformation Loftus, J.; O'Toole, T.; Plow, E. Science, Vol. 249, Issue 4971, p. 915-918 https://doi.org/10.1126/science.2392682	journal	August 1990
Ion-exchange chromatographic purification and quantitative analysis of Trichoderma reesei cellulases cellobiohydrolase I, II and endoglucanase II by fast protein liquid chromatography Medve, József; Lee, Dora; Tjerneld, Folke Journal of Chromatography A, Vol. 808, Issue 1-2, p. 153-165 https://doi.org/10.1016/S0021-9673(98)00132-0	journal	May 1998
Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites Nielsen, H.; Engelbrecht, J.; Brunak, S. Protein Engineering Design and Selection, Vol. 10, Issue 1, p. 1-6 https://doi.org/10.1093/protein/10.1.1	journal	January 1997
Structure of Cellulases and Their Applications Ohmiya, Kunio; Sakka, Kazuo; Karita, Shuichi Biotechnology and Genetic Engineering Reviews, Vol. 14, Issue 1, p. 365-414 https://doi.org/10.1080/02648725.1997.10647949	journal	April 1997
Kinetics of cellulose saccharification by Trichoderma reesei cellulases Ortega, N. International Biodeterioration & Biodegradation, Vol. 47, Issue 1, p. 7-14 https://doi.org/10.1016/S0964-8305(00)00101-3	journal	January 2001
Expression of two Trichoderma reesei endoglucanases in the yeast Saccharomyces cerevisiae Panttilä, Merja E.; André, Lars; Saloheimo, Markku Yeast, Vol. 3, Issue 3, p. 175-185 https://doi.org/10.1002/yea.320030305	journal	September 1987
Efficient secretion of two fungal cellobiohydrolases by Saccharomyces cerevisiae Penttilä, Merja E.; André, Lars; Lehtovaara, Päivi Gene, Vol. 63, Issue 1, p. 103-112 https://doi.org/10.1016/0378-1119(88)90549-5	journal	March 1988
Homology between cellulase genes of Trichoderma reesei: complete nucleotide sequence of the endoglucanase I gene Penttilä, Merja; Lehtovaara, Päivi; Nevalainen, Helena Gene, Vol. 45, Issue 3, p. 253-263 https://doi.org/10.1016/0378-1119(86)90023-5	journal	January 1986
Reshaping human antibodies for therapy Riechmann, Lutz; Clark, Michael; Waldmann, Herman Nature, Vol. 332, Issue 6162, p. 323-327 https://doi.org/10.1038/332323a0	journal	March 1988
Synthesis and secretion of wheat α-amylase in Saccharomyces cerevisiae Rothstein, Steven J.; Lahners, Kristine N.; Lazarus, Colin M. Gene, Vol. 55, Issue 2-3, p. 353-356 https://doi.org/10.1016/0378-1119(87)90296-4	journal	January 1987
CelS: a novel endoglucanase identified from Erwinia carotovora subsp. carotovora Saarilahti, Hannu T.; Henrissat, Bernard; Tapio Palva, E. Gene, Vol. 90, Issue 1, p. 9-14 https://doi.org/10.1016/0378-1119(90)90433-R	journal	May 1990
Cloning and sequencing of cellulase cDNA from Aspergillus kawachii and its expression in Saccharomyces cerevisiae Sakamoto, S.; Tamura, G.; Ito, K. Current Genetics, Vol. 27, Issue 5, p. 435-439 https://doi.org/10.1007/BF00311212	journal	April 1995
A novel, small endoglucanase gene, egl5, from Trichoderma reesei isolated by expression in yeast Saloheimo, Anu; Henrissat, Bernard; Hoffrén, Anna-Marja Molecular Microbiology, Vol. 13, Issue 2, p. 219-228 https://doi.org/10.1111/j.1365-2958.1994.tb00417.x	journal	July 1994
EGIII, a new endoglucanase from Trichoderma reesei: the characterization of both gene and enzyme Saloheimo, M.; Lehtovaara, P.; Penttilä, M. Gene, Vol. 63, Issue 1, p. 11-21 https://doi.org/10.1016/0378-1119(88)90541-0	journal	March 1988
cDNA Cloning of a Trichoderma reesei Cellulase and Demonstration of Endoglucanase Activity by Expression in Yeast Saloheimo, Markku; Nakari-SetaLa, Tiina; Tenkanen, Maija European Journal of Biochemistry, Vol. 249, Issue 2, p. 584-591 https://doi.org/10.1111/j.1432-1033.1997.00584.x	journal	October 1997
[79] Purification of all glycolytic enzymes from one muscle extract Scopes, Robert K.; Stoter, Ann Methods in Enzymology, Vol. 90, p. 479-490 https://doi.org/10.1016/S0076-6879(82)90175-6	journal	January 1982
Molecular Cloning of Exo–Cellobiohydrolase I Derived from Trichoderma Reesei Strain L27 Shoemaker, S.; Schweickart, V.; Ladner, M. Nature Biotechnology, Vol. 1, Issue 8, p. 691-696 https://doi.org/10.1038/nbt1083-691	journal	October 1983
Cloning and Sequencing of a Rhodothermus marinus Gene, bglA, Coding for a Thermostable beta-Glucanase and its Expression in Escherichia coli Spilliaert, Remi; Hreggvidsson, Gudmundur Oli; Kristjansson, Jakob Kristjan European Journal of Biochemistry, Vol. 224, Issue 3, p. 923-930 https://doi.org/10.1111/j.1432-1033.1994.00923.x	journal	September 1994
A New Model For Enzymatic Hydrolysis of Cellulose Based on the Two-Domain Structure of Cellobiohydrolase I Ståhlberg, Jerry; Johansson, Gunnar; Pettersson, Göran Nature Biotechnology, Vol. 9, Issue 3, p. 286-290 https://doi.org/10.1038/nbt0391-286	journal	March 1991
Trichoderma reesei cellulases and their core domains in the hydrolysis and modification of chemical pulp Suurnäkki, A.; Tenkanen, M.; Siika-aho, M. Cellulose, Vol. 7, Issue 2, p. 189-209 https://doi.org/10.1023/A:1009280109519	journal	June 2000
Separation of endo- and exo-type cellulases using a new affinity chromatography method van Tilbeurgh, Herman; Bhikhabhai, Ramagauri; Göran Pettersson, L. FEBS Letters, Vol. 169, Issue 2, p. 215-218 https://doi.org/10.1016/0014-5793(84)80321-X	journal	April 1984
Molecular Cloning and Expression of the Novel Fungal β-Glucosidase Genes from Humicola grisea and Trichoderma reesei Takashima, S.; Nakamura, A.; Hidaka, M. Journal of Biochemistry, Vol. 125, Issue 4, p. 728-736 https://doi.org/10.1093/oxfordjournals.jbchem.a022343	journal	April 1999
Homologous domains in Trichoderma reesei cellulolytic enzymes: Gene sequence and expression of cellobiohydrolase II Teeri, Tuula T.; Lehtovaara, Päivi; Kauppinen, Sakari Gene, Vol. 51, Issue 1, p. 43-52 https://doi.org/10.1016/0378-1119(87)90472-0	journal	January 1987
Organization of a gene cluster expressed specifically in the asexual spores of A. nidulans Timberlake, William E.; Barnard, Elizabeth C. Cell, Vol. 26, Issue 1, p. 29-37 https://doi.org/10.1016/0092-8674(81)90030-1	journal	October 1981
Studies on the chromatographic fractionation of Trichoderma reesei cellulases by hydrophobic interaction Tomaz, Cândida T.; Queiroz, João A. Journal of Chromatography A, Vol. 865, Issue 1-2, p. 123-128 https://doi.org/10.1016/S0021-9673(99)00851-1	journal	December 1999
Studies of the cellulolytic system of Trichoderma reesei QM 9414. Analysis of domain function in two cellobiohydrolases by limited proteolysis TOMME, Peter; TILBEURGH, Herman; PETTERSSON, Goran European Journal of Biochemistry, Vol. 170, Issue 3, p. 575-581 https://doi.org/10.1111/j.1432-1033.1988.tb13736.x	journal	January 1988
Codon optimization of xylanase gene xynB from the thermophilic bacterium Dictyoglomus thermophilum for expression in the filamentous fungus Trichoderma reesei Te'o, Valentino S.J.; Cziferszky, Angela E.; Bergquist, Peter L. FEMS Microbiology Letters, Vol. 190, Issue 1, p. 13-19 https://doi.org/10.1111/j.1574-6968.2000.tb09255.x	journal	September 2000
Engineering yeast for efficient cellulose degradation Van Rensburg, Pierre; Van Zyl, Willem H.; Pretorius, Isak S. Yeast, Vol. 14, Issue 1, p. 67-76 https://doi.org/10.1002/(SICI)1097-0061(19980115)14:1<67::AID-YEA200>3.0.CO;2-T	journal	January 1998
A radiation hybrid map of 18 growth factor, growth factor receptor, hormone receptor, or neurotransmitter receptor genes on the distal region of the long arm of chromosome 5 Warrington, J. A.; Bailey, S. K.; Armstrong, E. Genomics, Vol. 13, Issue 3, p. 803-808 https://doi.org/10.1016/0888-7543(92)90156-M	journal	July 1992
Importance of Hydrogen-Bond Formation in Stabilizing the Transition State of Subtilisin Wells, J. A.; Cunningham, B. C.; Graycar, T. P. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, Vol. 317, Issue 1540, p. 415-423 https://doi.org/10.1098/rsta.1986.0051	journal	April 1986
Cassette mutagenesis: an efficient method for generation of multiple mutations at defined sites Wells, James A.; Vasser, Mark; Powers, David B. Gene, Vol. 34, Issue 2-3, p. 315-323 https://doi.org/10.1016/0378-1119(85)90140-4	journal	January 1985
Methods for measuring cellulase activities Wood, Thomas M.; Bhat, K. Mahalingeshwara Methods in Enzymology, Vol. 160, p. 87-112 https://doi.org/10.1016/0076-6879(88)60109-1	journal	January 1988
Oligonucleotide-directed mutagenesis using M13-derived vectors: an efficient and general procedure for the production of point mutations in any fragment of DNA Zoller, Mark J.; Smith, Michael Nucleic Acids Research, Vol. 10, Issue 20, p. 6487-6500 https://doi.org/10.1093/nar/10.20.6487	journal	January 1982
Properties of cellulolytic enzyme systems Wood, Thomas M. Biochemical Society Transactions, Vol. 13, Issue 2, p. 407-410 https://doi.org/10.1042/bst0130407	journal	April 1985

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