Virus–host interactions: from systems biology to translational research
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journal
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August 2009 |
A Systems Biology Approach to Infectious Disease Research: Innovating the Pathogen-Host Research Paradigm
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journal
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February 2011 |
Implication of Inflammatory Macrophages, Nuclear Receptors, and Interferon Regulatory Factors in Increased Virulence of Pandemic 2009 H1N1 Influenza A Virus after Host Adaptation
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journal
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April 2012 |
Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice
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journal
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January 2013 |
Differential Host Response, Rather Than Early Viral Replication Efficiency, Correlates with Pathogenicity Caused by Influenza Viruses
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journal
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September 2013 |
Lipidomic Profiling of Influenza Infection Identifies Mediators that Induce and Resolve Inflammation
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journal
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July 2013 |
A Network Integration Approach to Predict Conserved Regulators Related to Pathogenicity of Influenza and SARS-CoV Respiratory Viruses
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journal
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July 2013 |
Release of Severe Acute Respiratory Syndrome Coronavirus Nuclear Import Block Enhances Host Transcription in Human Lung Cells
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journal
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January 2013 |
Influenza Research Database: an integrated bioinformatics resource for influenza research and surveillance: Influenza Research Database
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journal
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January 2012 |
ViPR: an open bioinformatics database and analysis resource for virology research
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journal
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October 2011 |
The Severe Acute Respiratory Syndrome
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journal
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December 2003 |
Generation of influenza A viruses entirely from cloned cDNAs
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journal
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August 1999 |
Novel Approach to the Development of Effective H5N1 Influenza A Virus Vaccines: Use of M2 Cytoplasmic Tail Mutants
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journal
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December 2007 |
Experimental adaptation of an influenza H5 HA confers respiratory droplet transmission to a reassortant H5 HA/H1N1 virus in ferrets
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journal
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May 2012 |
Molecular Basis for High Virulence of Hong Kong H5N1 Influenza A Viruses
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journal
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September 2001 |
Protection of Mice against Lethal Challenge with 2009 H1N1 Influenza A Virus by 1918-Like and Classical Swine H1N1 Based Vaccines
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journal
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January 2010 |
Genomic analysis of increased host immune and cell death responses induced by 1918 influenza virus
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journal
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September 2006 |
Compromised respiratory function in lethal influenza infection is characterized by the depletion of type I alveolar epithelial cells beyond threshold levels
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journal
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April 2013 |
Protective Memory Responses Are Modulated by Priming Events prior to Challenge
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journal
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November 2009 |
Adaptation of Pandemic H1N1 Influenza Viruses in Mice
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journal
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June 2010 |
Synthetic recombinant bat SARS-like coronavirus is infectious in cultured cells and in mice
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journal
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November 2008 |
Reverse genetics with a full-length infectious cDNA of severe acute respiratory syndrome coronavirus
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journal
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October 2003 |
A Mouse-Adapted SARS-Coronavirus Causes Disease and Mortality in BALB/c Mice
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journal
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January 2007 |
Dynamic Innate Immune Responses of Human Bronchial Epithelial Cells to Severe Acute Respiratory Syndrome-Associated Coronavirus Infection
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journal
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January 2010 |
limma: Linear Models for Microarray Data
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book
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January 2005 |
Bioconductor: open software development for computational biology and bioinformatics
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journal
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September 2004 |
PRISM: A data management system for high-throughput proteomics
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journal
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March 2006 |
Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data
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journal
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January 2009 |
VIPER: an advanced software package to support high-throughput LC-MS peptide identification
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journal
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June 2007 |
Advances in proteomics data analysis and display using an accurate mass and time tag approach
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journal
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January 2006 |
Combined Statistical Analyses of Peptide Intensities and Peptide Occurrences Improves Identification of Significant Peptides from MS-Based Proteomics Data
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journal
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November 2010 |
Improved quality control processing of peptide-centric LC-MS proteomics data
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journal
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August 2011 |
A statistical selection strategy for normalization procedures in LC-MS proteomics experiments through dataset-dependent ranking of normalization scaling factors
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journal
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November 2011 |
DAnTE: a statistical tool for quantitative analysis of -omics data
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journal
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May 2008 |
Conserved host response to highly pathogenic avian influenza virus infection in human cell culture, mouse and macaque model systems
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journal
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January 2011 |
Technical Variability Is Greater than Biological Variability in a Microarray Experiment but Both Are Outweighed by Changes Induced by Stimulation
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journal
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May 2011 |
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
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journal
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November 2008 |
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
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journal
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December 2008 |
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
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journal
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September 2005 |
WGCNA: an R package for weighted correlation network analysis
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journal
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December 2008 |
PRISM offers a comprehensive genomic approach to transcription factor function prediction
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journal
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February 2013 |
Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes
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journal
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May 2009 |
Network Analysis of Epidermal Growth Factor Signaling Using Integrated Genomic, Proteomic and Phosphorylation Data
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journal
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March 2012 |
Data merging for integrated microarray and proteomic analysis
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journal
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May 2006 |
GenePattern 2.0
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journal
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May 2006 |
Galaxy: A platform for interactive large-scale genome analysis
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journal
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September 2005 |
An integrative analysis of the age-associated multi-omic landscape across cancers
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journal
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April 2021 |
Crowdsourcing drug discovery for pandemics
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journal
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June 2020 |
Adipose-derived mesenchymal stem cells differentiate into heterogeneous cancer-associated fibroblasts in a stroma-rich xenograft model
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journal
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February 2021 |
Chemogenomic profiling of breast cancer patient-derived xenografts reveals targetable vulnerabilities for difficult-to-treat tumors
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journal
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June 2020 |
A Mouse-Adapted SARS-Coronavirus Causes Disease and Mortality in BALB/c Mice
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text
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January 2007 |
Reverse genetics with a full-length infectious cDNA of severe acute respiratory syndrome coronavirus
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text
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January 2003 |
Improved quality control processing of peptide-centric LC-MS proteomics data
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text
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January 2011 |
A Network Integration Approach to Predict Conserved Regulators Related to Pathogenicity of Influenza and SARS-CoV Respiratory Viruses
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text
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January 2013 |
Synthetic recombinant bat SARS-like coronavirus is infectious in cultured cells and in mice
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text
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January 2008 |
Mechanisms of Severe Acute Respiratory Syndrome Coronavirus-Induced Acute Lung Injury
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text
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January 2013 |
Attenuation and Restoration of Severe Acute Respiratory Syndrome Coronavirus Mutant Lacking 2'-O-Methyltransferase Activity
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text
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January 2014 |
Severe Acute Respiratory Syndrome Coronavirus Group-Specific Open Reading Frames Encode Nonessential Functions for Replication in Cell Cultures and Mice
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text
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January 2005 |
Cell Host Response to Infection with Novel Human Coronavirus EMC Predicts Potential Antivirals and Important Differences with SARS Coronavirus
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text
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January 2013 |
Release of Severe Acute Respiratory Syndrome Coronavirus Nuclear Import Block Enhances Host Transcription in Human Lung Cells
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text
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January 2013 |
Severe Acute Respiratory Syndrome Coronavirus Group-Specific Open Reading Frames Encode Nonessential Functions for Replication in Cell Cultures and Mice
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journal
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November 2005 |
The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies
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journal
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August 2008 |