A solvent replenishment solution for managing evaporation of biochemical reactions in air-matrix digital microfluidics devices
Abstract
Digital microfluidics (DMF) is a powerful technique for sample preparation and analysis for a broad range of biological and chemical applications. In many cases, it is desirable to carry out DMF on an open surface, such that the matrix surrounding the droplets is ambient air. However, the utility of the air-matrix DMF format has been severely limited by problems with droplet evaporation, especially when the droplet-based biochemical reactions require high temperatures for long periods of time. We present a simple solution for managing evaporation in air-matrix DMF: just-in-time replenishment of the reaction volume using droplets of solvent. We demonstrate that this solution enables DMF-mediated execution of several different biochemical reactions (RNA fragmentation, first-strand cDNA synthesis, and PCR) over a range of temperatures (4–95 °C) and incubation times (up to 1 h or more) without use of oil, humidifying chambers, or off-chip heating modules. Reaction volumes and temperatures were maintained roughly constant over the course of each experiment, such that the reaction kinetics and products generated by the air-matrix DMF device were comparable to those of conventional benchscale reactions. As a result, this simple yet effective solution for evaporation management is an important advance in developing air-matrix DMF for a widemore »
- Authors:
-
- Sandia National Laboratories (SNL-CA), Livermore, CA (United States)
- Publication Date:
- Research Org.:
- Sandia National Lab. (SNL-CA), Livermore, CA (United States)
- Sponsoring Org.:
- USDOE National Nuclear Security Administration (NNSA)
- OSTI Identifier:
- 1225865
- Report Number(s):
- SAND-2015-0066J
Journal ID: ISSN 1473-0197; LCAHAM; 558325
- Grant/Contract Number:
- AC04-94AL85000
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Lab on a chip (Print)
- Additional Journal Information:
- Journal Name: Lab on a chip (Print); Journal Volume: 15; Journal Issue: 1; Journal ID: ISSN 1473-0197
- Publisher:
- Royal Society of Chemistry
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CHEMISTRY
Citation Formats
Jebrail, Mais J., Renzi, Ronald F., Sinha, Anupama, Van De Vreugde, Jim, Gondhalekar, Carmen, Ambriz, Cesar, Meagher, Robert J., and Branda, Steven S. A solvent replenishment solution for managing evaporation of biochemical reactions in air-matrix digital microfluidics devices. United States: N. p., 2014.
Web. doi:10.1039/c4lc00703d.
Jebrail, Mais J., Renzi, Ronald F., Sinha, Anupama, Van De Vreugde, Jim, Gondhalekar, Carmen, Ambriz, Cesar, Meagher, Robert J., & Branda, Steven S. A solvent replenishment solution for managing evaporation of biochemical reactions in air-matrix digital microfluidics devices. United States. https://doi.org/10.1039/c4lc00703d
Jebrail, Mais J., Renzi, Ronald F., Sinha, Anupama, Van De Vreugde, Jim, Gondhalekar, Carmen, Ambriz, Cesar, Meagher, Robert J., and Branda, Steven S. Wed .
"A solvent replenishment solution for managing evaporation of biochemical reactions in air-matrix digital microfluidics devices". United States. https://doi.org/10.1039/c4lc00703d. https://www.osti.gov/servlets/purl/1225865.
@article{osti_1225865,
title = {A solvent replenishment solution for managing evaporation of biochemical reactions in air-matrix digital microfluidics devices},
author = {Jebrail, Mais J. and Renzi, Ronald F. and Sinha, Anupama and Van De Vreugde, Jim and Gondhalekar, Carmen and Ambriz, Cesar and Meagher, Robert J. and Branda, Steven S.},
abstractNote = {Digital microfluidics (DMF) is a powerful technique for sample preparation and analysis for a broad range of biological and chemical applications. In many cases, it is desirable to carry out DMF on an open surface, such that the matrix surrounding the droplets is ambient air. However, the utility of the air-matrix DMF format has been severely limited by problems with droplet evaporation, especially when the droplet-based biochemical reactions require high temperatures for long periods of time. We present a simple solution for managing evaporation in air-matrix DMF: just-in-time replenishment of the reaction volume using droplets of solvent. We demonstrate that this solution enables DMF-mediated execution of several different biochemical reactions (RNA fragmentation, first-strand cDNA synthesis, and PCR) over a range of temperatures (4–95 °C) and incubation times (up to 1 h or more) without use of oil, humidifying chambers, or off-chip heating modules. Reaction volumes and temperatures were maintained roughly constant over the course of each experiment, such that the reaction kinetics and products generated by the air-matrix DMF device were comparable to those of conventional benchscale reactions. As a result, this simple yet effective solution for evaporation management is an important advance in developing air-matrix DMF for a wide variety of new, high-impact applications, particularly in the biomedical sciences.},
doi = {10.1039/c4lc00703d},
journal = {Lab on a chip (Print)},
number = 1,
volume = 15,
place = {United States},
year = {Wed Oct 01 00:00:00 EDT 2014},
month = {Wed Oct 01 00:00:00 EDT 2014}
}
Web of Science
Figures / Tables:
Works referenced in this record:
Digital microfluidics: a versatile tool for applications in chemistry, biology and medicine
journal, January 2012
- Jebrail, Mais J.; Bartsch, Michael S.; Patel, Kamlesh D.
- Lab on a Chip, Vol. 12, Issue 14
Electrowetting-based actuation of liquid droplets for microfluidic applications
journal, September 2000
- Pollack, Michael G.; Fair, Richard B.; Shenderov, Alexander D.
- Applied Physics Letters, Vol. 77, Issue 11
Electrowetting and electrowetting-on-dielectric for microscale liquid handling
journal, January 2002
- Lee, Junghoon; Moon, Hyejin; Fowler, Jesse
- Sensors and Actuators A: Physical, Vol. 95, Issue 2-3
CHEMISTRY: Putting Electrowetting to Work
journal, October 2008
- Wheeler, A. R.
- Science, Vol. 322, Issue 5901
Multilayer Hybrid Microfluidics: A Digital-to-Channel Interface for Sample Processing and Separations
journal, August 2010
- Watson, Michael W. L.; Jebrail, Mais J.; Wheeler, Aaron R.
- Analytical Chemistry, Vol. 82, Issue 15
World-to-Digital-Microfluidic Interface Enabling Extraction and Purification of RNA from Human Whole Blood
journal, February 2014
- Jebrail, Mais J.; Sinha, Anupama; Vellucci, Samantha
- Analytical Chemistry, Vol. 86, Issue 8
A Microfluidic DNA Library Preparation Platform for Next-Generation Sequencing
journal, July 2013
- Kim, Hanyoup; Jebrail, Mais J.; Sinha, Anupama
- PLoS ONE, Vol. 8, Issue 7
Digital Microfluidic Method for Protein Extraction by Precipitation
journal, January 2009
- Jebrail, Mais J.; Wheeler, Aaron R.
- Analytical Chemistry, Vol. 81, Issue 1
Droplet-Scale Estrogen Assays in Breast Tissue, Blood, and Serum
journal, October 2009
- Mousa, N. A.; Jebrail, M. J.; Yang, H.
- Science Translational Medicine, Vol. 1, Issue 1
Synchronized Synthesis of Peptide-Based Macrocycles by Digital Microfluidics
journal, August 2010
- Jebrail, Mais J.; Ng, Alphonsus H. C.; Rai, Vishal
- Angewandte Chemie International Edition, Vol. 49, Issue 46, p. 8625-8629
Incubated Protein Reduction and Digestion on an Electrowetting-on-Dielectric Digital Microfluidic Chip for MALDI-MS
journal, December 2010
- Nelson, Wyatt C.; Peng, Ivory; Lee, Geun-An
- Analytical Chemistry, Vol. 82, Issue 23
Micro-chemical synthesis of molecular probes on an electronic microfluidic device
journal, December 2011
- Keng, P. Y.; Chen, S.; Ding, H.
- Proceedings of the National Academy of Sciences, Vol. 109, Issue 3
Combinatorial Synthesis of Peptidomimetics Using Digital Microfluidics
journal, September 2012
- Jebrail, Mais J.; Assem, Naila; Mudrik, Jared M.
- Journal of Flow Chemistry, Vol. 2, Issue 3
Electrowetting-based actuation of droplets for integrated microfluidicsElectronic supplementary information (ESI) available: six videos showing droplet flow, droplet dispensing and electrowetting. See http://www.rsc.org/suppdata/lc/b1/b110474h/
journal, January 2002
- Pollack, M. G.; Shenderov, A. D.; Fair, R. B.
- Lab on a Chip, Vol. 2, Issue 2
Water-oil core-shell droplets for electrowetting-based digital microfluidic devices
journal, January 2008
- Brassard, Daniel; Malic, Lidija; Normandin, François
- Lab on a Chip, Vol. 8, Issue 8
Let's get digital: digitizing chemical biology with microfluidics
journal, October 2010
- Jebrail, Mais J.; Wheeler, Aaron R.
- Current Opinion in Chemical Biology, Vol. 14, Issue 5
All-terrain droplet actuation
journal, January 2008
- Abdelgawad, Mohamed; Freire, Sergio L. S.; Yang, Hao
- Lab on a Chip, Vol. 8, Issue 5
A microfluidic platform for complete mammalian cell culture
journal, January 2010
- Barbulovic-Nad, Irena; Au, Sam H.; Wheeler, Aaron R.
- Lab on a Chip, Vol. 10, Issue 12
Integrated microbioreactor for culture and analysis of bacteria, algae and yeast
journal, September 2010
- Au, Sam H.; Shih, Steve C. C.; Wheeler, Aaron R.
- Biomedical Microdevices, Vol. 13, Issue 1
Direct-Referencing Two-Dimensional-Array Digital Microfluidics Using Multilayer Printed Circuit Board
journal, April 2008
- Jian Gong,
- Journal of Microelectromechanical Systems, Vol. 17, Issue 2
All-electronic droplet generation on-chip with real-time feedback control for EWOD digital microfluidics
journal, January 2008
- Gong, Jian; Kim, Chang-Jin “CJ”
- Lab on a Chip, Vol. 8, Issue 6
On-demand droplet loading for automated organic chemistry on digital microfluidics
journal, January 2013
- Shah, Gaurav J.; Ding, Huijiang; Sadeghi, Saman
- Lab on a Chip, Vol. 13, Issue 14
Automated on-chip droplet dispensing with volume control by electro-wetting actuation and capacitance metering
journal, March 2004
- Ren, H.
- Sensors and Actuators B: Chemical, Vol. 98, Issue 2-3
A feedback control system for high-fidelity digital microfluidics
journal, January 2011
- Shih, Steve C. C.; Fobel, Ryan; Kumar, Paresh
- Lab Chip, Vol. 11, Issue 3
Peregrine: A rapid and unbiased method to produce strand-specific RNA-Seq libraries from small quantities of starting material
journal, April 2013
- Langevin, Stanley A.; Bent, Zachary W.; Solberg, Owen D.
- RNA Biology, Vol. 10, Issue 4
Works referencing / citing this record:
Universal electronics for miniature and automated chemical assays
journal, January 2015
- Urban, Pawel L.
- The Analyst, Vol. 140, Issue 4
A review of digital microfluidics as portable platforms for lab-on a-chip applications
journal, January 2016
- Samiei, Ehsan; Tabrizian, Maryam; Hoorfar, Mina
- Lab on a Chip, Vol. 16, Issue 13
Polymerase chain reaction in microfluidic devices
journal, January 2016
- Ahrberg, Christian D.; Manz, Andreas; Chung, Bong Geun
- Lab on a Chip, Vol. 16, Issue 20
BioScript: programming safe chemistry on laboratories-on-a-chip
journal, October 2018
- Ott, Jason; Loveless, Tyson; Curtis, Chris
- Proceedings of the ACM on Programming Languages, Vol. 2, Issue OOPSLA
Puddle: A Dynamic, Error-Correcting, Full-Stack Microfluidics Platform
conference, April 2019
- Willsey, Max; Stephenson, Ashley P.; Takahashi, Chris
- ASPLOS '19: Architectural Support for Programming Languages and Operating Systems, Proceedings of the Twenty-Fourth International Conference on Architectural Support for Programming Languages and Operating Systems
Role of Digital Microfluidics in Enabling Access to Laboratory Automation and Making Biology Programmable
journal, June 2020
- Kothamachu, Varun B.; Zaini, Sabrina; Muffatto, Federico
- SLAS TECHNOLOGY: Translating Life Sciences Innovation
Digital Microfluidics for Nucleic Acid Amplification
journal, June 2017
- Coelho, Beatriz; Veigas, Bruno; Fortunato, Elvira
- Sensors, Vol. 17, Issue 7
Figures / Tables found in this record: