The many meanings of gross photosynthesis and their implication for photosynthesis research from leaf to globe
Abstract
different meanings by different communities. We review the history of this term and associated concepts to clarify the terminology and make recommendations about a consistent use of terms in accordance with photosynthetic theory. We show that a widely used eddy covariance CO2 flux partitioning approach yields estimates which are quantitatively closer to the definition of true photosynthesis despite aiming at estimating apparent photosynthesis.
- Authors:
-
- Univ. of Innsbruck, Innsbruck (Austria); European Academy of Bolzano (Italy)
- Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)
- Publication Date:
- Research Org.:
- Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC)
- OSTI Identifier:
- 1265743
- Grant/Contract Number:
- AC05-00OR22725
- Resource Type:
- Accepted Manuscript
- Journal Name:
- Plant, Cell and Environment
- Additional Journal Information:
- Journal Volume: 38; Journal Issue: 12; Journal ID: ISSN 0140-7791
- Publisher:
- Wiley
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 59 BASIC BIOLOGICAL SCIENCES
Citation Formats
Wohlfahrt, Georg, and Gu, Lianhong. The many meanings of gross photosynthesis and their implication for photosynthesis research from leaf to globe. United States: N. p., 2015.
Web. doi:10.1111/pce.12569.
Wohlfahrt, Georg, & Gu, Lianhong. The many meanings of gross photosynthesis and their implication for photosynthesis research from leaf to globe. United States. https://doi.org/10.1111/pce.12569
Wohlfahrt, Georg, and Gu, Lianhong. Thu .
"The many meanings of gross photosynthesis and their implication for photosynthesis research from leaf to globe". United States. https://doi.org/10.1111/pce.12569. https://www.osti.gov/servlets/purl/1265743.
@article{osti_1265743,
title = {The many meanings of gross photosynthesis and their implication for photosynthesis research from leaf to globe},
author = {Wohlfahrt, Georg and Gu, Lianhong},
abstractNote = {different meanings by different communities. We review the history of this term and associated concepts to clarify the terminology and make recommendations about a consistent use of terms in accordance with photosynthetic theory. We show that a widely used eddy covariance CO2 flux partitioning approach yields estimates which are quantitatively closer to the definition of true photosynthesis despite aiming at estimating apparent photosynthesis.},
doi = {10.1111/pce.12569},
journal = {Plant, Cell and Environment},
number = 12,
volume = 38,
place = {United States},
year = {Thu Jun 25 00:00:00 EDT 2015},
month = {Thu Jun 25 00:00:00 EDT 2015}
}
Free Publicly Available Full Text
Publisher's Version of Record
Other availability
Cited by: 79 works
Citation information provided by
Web of Science
Web of Science
Save to My Library
You must Sign In or Create an Account in order to save documents to your library.
Works referenced in this record:
Global and time-resolved monitoring of crop photosynthesis with chlorophyll fluorescence
journal, March 2014
- Guanter, L.; Zhang, Y.; Jung, M.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 14
Productivity overshadows temperature in determining soil and ecosystem respiration across European forests
journal, March 2001
- Janssens, I. A.; Lankreijer, H.; Matteucci, G.
- Global Change Biology, Vol. 7, Issue 3
'Breathing' of the terrestrial biosphere: lessons learned from a global network of carbon dioxide flux measurement systems
journal, January 2008
- Baldocchi, Dennis
- Australian Journal of Botany, Vol. 56, Issue 1
Simple scaling of photosynthesis from leaves to canopies without the errors of big-leaf models
journal, May 1997
- De Pury, D. G. G.; Farquhar, G. D.
- Plant, Cell and Environment, Vol. 20, Issue 5
12CO2 emission from different metabolic pathways measured in illuminated and darkened C3 and C4 leaves at low, atmospheric and elevated CO2 concentration
journal, May 2003
- Pinelli, P.
- Journal of Experimental Botany, Vol. 54, Issue 388
Resistances along the CO2 diffusion pathway inside leaves
journal, April 2009
- Evans, J. R.; Kaldenhoff, R.; Genty, B.
- Journal of Experimental Botany, Vol. 60, Issue 8
A New Approach to Measure Gross CO 2 Fluxes in Leaves. Gross CO 2 Assimilation, Photorespiration, and Mitochondrial Respiration in the Light in Tomato under Drought Stress
journal, May 2001
- Haupt-Herting, Silke; Klug, Klaus; Fock, Heinrich P.
- Plant Physiology, Vol. 126, Issue 1
Improving canopy processes in the Community Land Model version 4 (CLM4) using global flux fields empirically inferred from FLUXNET data
journal, January 2011
- Bonan, Gordon B.; Lawrence, Peter J.; Oleson, Keith W.
- Journal of Geophysical Research, Vol. 116, Issue G2
Fluxes of CO2 and water between terrestrial vegetation and the atmosphere estimated from isotope measurements
journal, April 1996
- Yakir, Dan; Wang, Xue-Feng
- Nature, Vol. 380, Issue 6574
Modelling Fluxes and Concentrations of CO 2 , H 2 O and Sensible Heat Within and Above a Mountain Meadow Canopy: A Comparison of Three Lagrangian Models and Three Parameterisation Options for the Lagrangian Time Scale
journal, October 2004
- Wohlfahrt, Georg
- Boundary-Layer Meteorology, Vol. 113, Issue 1
Does photosynthesis affect grassland soil-respired CO 2 and its carbon isotope composition on a diurnal timescale?
journal, February 2009
- Bahn, Michael; Schmitt, Michael; Siegwolf, Rolf
- New Phytologist, Vol. 182, Issue 2
Advantages of diffuse radiation for terrestrial ecosystem productivity: ADVANTAGES OF DIFFUSE RADIATION
journal, March 2002
- Gu, Lianhong; Baldocchi, Dennis; Verma, Shashi B.
- Journal of Geophysical Research: Atmospheres, Vol. 107, Issue D6
Comment on Vickers et al.: Self-correlation between assimilation and respiration resulting from flux partitioning of eddy-covariance CO2 fluxes
journal, February 2010
- Lasslop, Gitta; Reichstein, Markus; Detto, Matteo
- Agricultural and Forest Meteorology, Vol. 150, Issue 2
Impact of mesophyll diffusion on estimated global land CO2 fertilization
journal, October 2014
- Sun, Y.; Gu, L.; Dickinson, R. E.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 44
Leaf Respiration in Light and Darkness (A Comparison of Slow- and Fast-Growing Poa Species)
journal, March 1997
- Atkin, O. K.; Westbeek, Mhm.; Cambridge, M. L.
- Plant Physiology, Vol. 113, Issue 3
Artefactual responses of mesophyll conductance to CO 2 and irradiance estimated with the variable J and online isotope discrimination methods : Mesophyll conductance, CO
journal, December 2013
- Gu, Lianhong; Sun, Ying
- Plant, Cell & Environment, Vol. 37, Issue 5
Tracing the flow of carbon dioxide and water vapor between the biosphere and atmosphere: A review of optical isotope techniques and their application
journal, June 2013
- Griffis, Timothy J.
- Agricultural and Forest Meteorology, Vol. 174-175
Phosphoglycolate production catalyzed by ribulose diphosphate carboxylase
journal, November 1971
- Bowes, G.; Ogren, W. L.; Hageman, R. H.
- Biochemical and Biophysical Research Communications, Vol. 45, Issue 3
On the Factor Light in Plant Communities and its Importance for Matter Production
journal, December 2004
- Monsi, M.
- Annals of Botany, Vol. 95, Issue 3
Improving modeling of the 'dark part' of canopy carbon gain
journal, May 2014
- Niinemets, U.
- Tree Physiology, Vol. 34, Issue 6
History of the word photosynthesis and evolution of its definition
journal, July 2002
- Gest, Howard
- Photosynthesis Research, Vol. 73, Issue 1/3, p. 7-10
Determination of the Rate of CO 2 Evolution by Green Leaves in Light
journal, May 1969
- Hew, Choy-Sin; Krotkov, G.; Canvin, D. T.
- Plant Physiology, Vol. 44, Issue 5
Sources and sinks of carbonyl sulfide in an agricultural field in the Southern Great Plains
journal, June 2014
- Maseyk, K.; Berry, J. A.; Billesbach, D.
- Proceedings of the National Academy of Sciences, Vol. 111, Issue 25
Partitioning forest carbon fluxes with overstory and understory eddy-covariance measurements: A synthesis based on FLUXNET data
journal, May 2007
- Misson, Laurent; Baldocchi, D. D.; Black, T. A.
- Agricultural and Forest Meteorology, Vol. 144, Issue 1-2
Carbonyl sulfide (COS) as a tracer for canopy photosynthesis, transpiration and stomatal conductance: potential and limitations†: COS as a tracer for canopy gas exchange
journal, November 2011
- Wohlfahrt, Georg; Brilli, Federico; HÖRtnagl, Lukas
- Plant, Cell & Environment, Vol. 35, Issue 4
Linking chlorophyll a fluorescence to photosynthesis for remote sensing applications: mechanisms and challenges
journal, May 2014
- Porcar-Castell, Albert; Tyystjärvi, Esa; Atherton, Jon
- Journal of Experimental Botany, Vol. 65, Issue 15
On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm
journal, September 2005
- Reichstein, Markus; Falge, Eva; Baldocchi, Dennis
- Global Change Biology, Vol. 11, Issue 9
Gap filling strategies for defensible annual sums of net ecosystem exchange
journal, March 2001
- Falge, Eva; Baldocchi, Dennis; Olson, Richard
- Agricultural and Forest Meteorology, Vol. 107, Issue 1
EDDY COVARIANCE CO 2 FLUX MEASUREMENTS IN NOCTURNAL CONDITIONS: AN ANALYSIS OF THE PROBLEM
journal, September 2008
- Aubinet, Marc
- Ecological Applications, Vol. 18, Issue 6
Self-correlation between assimilation and respiration resulting from flux partitioning of eddy-covariance CO2 fluxes
journal, September 2009
- Vickers, Dean; Thomas, Christoph K.; Martin, Jonathan G.
- Agricultural and Forest Meteorology, Vol. 149, Issue 9
Separation of net ecosystem exchange into assimilation and respiration using a light response curve approach: critical issues and global evaluation: SEPARATION OF NEE INTO GPP AND RECO
journal, January 2010
- Lasslop, Gitta; Reichstein, Markus; Papale, Dario
- Global Change Biology, Vol. 16, Issue 1
Photosynthetic Control of Atmospheric Carbonyl Sulfide During the Growing Season
journal, November 2008
- Campbell, J. E.; Carmichael, G. R.; Chai, T.
- Science, Vol. 322, Issue 5904
The impact of soil microorganisms on the global budget of δ 18 O in atmospheric CO 2
journal, December 2009
- Wingate, Lisa; Ogée, Jérôme; Cuntz, Matthias
- Proceedings of the National Academy of Sciences, Vol. 106, Issue 52
Reconciling Carbon-cycle Concepts, Terminology, and Methods
journal, November 2006
- Chapin, F. S.; Woodwell, G. M.; Randerson, J. T.
- Ecosystems, Vol. 9, Issue 7
Terrestrial gross primary production inferred from satellite fluorescence and vegetation models
journal, July 2014
- Parazoo, Nicholas C.; Bowman, Kevin; Fisher, Joshua B.
- Global Change Biology, Vol. 20, Issue 10
Partitioning net ecosystem carbon exchange with isotopic fluxes of CO2
journal, February 2001
- Bowling, David R.; Tans, Pieter P.; Monson, Russell K.
- Global Change Biology, Vol. 7, Issue 2
On the multi-temporal correlation between photosynthesis and soil CO2 efflux: reconciling lags and observations
journal, May 2011
- Vargas, Rodrigo; Baldocchi, Dennis D.; Bahn, Michael
- New Phytologist, Vol. 191, Issue 4
Some relationships between the biochemistry of photosynthesis and the gas exchange of leaves
journal, December 1981
- von Caemmerer, S.; Farquhar, G. D.
- Planta, Vol. 153, Issue 4
Opposite carbon isotope discrimination during dark respiration in leaves versus roots - a review
journal, November 2013
- Ghashghaie, Jaleh; Badeck, Franz W.
- New Phytologist, Vol. 201, Issue 3
Estimation of daytime ecosystem respiration to determine gross primary production of a mountain meadow
journal, May 2005
- Wohlfahrt, Georg; Bahn, Michael; Haslwanter, Alois
- Agricultural and Forest Meteorology, Vol. 130, Issue 1-2
A Rapid, Postillumination Deceleration of Respiration in Green Leaves.
journal, January 1955
- Decker, John P.
- Plant Physiology, Vol. 30, Issue 1
A biochemical model of photosynthetic CO2 assimilation in leaves of C3 species
journal, June 1980
- Farquhar, G. D.; von Caemmerer, S.; Berry, J. A.
- Planta, Vol. 149, Issue 1
The Early History of "Photosynthetica", "Photosynthesis Research", and their Publishers
journal, March 2002
- Govindjee, ; Šesták, Z.; Peters, W. R.
- Photosynthetica, Vol. 40, Issue 1, p. 1-11
Bringing the Kok effect to light: A review on the integration of daytime respiration and net ecosystem exchange
journal, August 2013
- Heskel, Mary A.; Atkin, Owen K.; Turnbull, Matthew H.
- Ecosphere, Vol. 4, Issue 8
Two Sources of Error in the Oxygen Light and Dark Bottle Method1
journal, April 1959
- Pratt, David M.; Berkson, Harold
- Limnology and Oceanography, Vol. 4, Issue 3
Asymmetrical effects of mesophyll conductance on fundamental photosynthetic parameters and their relationships estimated from leaf gas exchange measurements: Asymmetrical mesophyll conductance effects
journal, November 2013
- Sun, Ying; Gu, Lianhong; Dickinson, Robert E.
- Plant, Cell & Environment, Vol. 37, Issue 4
A coupled model of the global cycles of carbonyl sulfide and CO 2 : A possible new window on the carbon cycle : CARBONYL SULFIDE AS A GLOBAL CARBON CYCLE TRACER
journal, June 2013
- Berry, Joe; Wolf, Adam; Campbell, J. Elliott
- Journal of Geophysical Research: Biogeosciences, Vol. 118, Issue 2
A list of personal perspectives with selected quotations, along with lists of tributes, historical notes, Nobel and Kettering awards related to photosynthesis
journal, January 2002
- Govindjee, ; Krogmann, David W.
- Photosynthesis Research, Vol. 73, Issue 1/3, p. 11-20
Bringing the Kok effect to light: A review on the integration of daytime respiration and net ecosystem exchange
text, January 2013
- Heskel, Mary Allison; Atkin, Owen K.; Turnbull, Matthew H.
- Columbia University
Works referencing / citing this record:
In situ soil COS exchange of a temperate mountain grassland under simulated drought
journal, January 2017
- Kitz, Florian; Gerdel, Katharina; Hammerle, Albin
- Oecologia, Vol. 183, Issue 3
An extreme heatwave enhanced the xanthophyll de-epoxidation state in leaves of Eucalyptus trees grown in the field
journal, January 2020
- Dhami, Namraj; Drake, John E.; Tjoelker, Mark G.
- Physiology and Molecular Biology of Plants, Vol. 26, Issue 2
Widespread inhibition of daytime ecosystem respiration
journal, February 2019
- Keenan, Trevor F.; Migliavacca, Mirco; Papale, Dario
- Nature Ecology & Evolution, Vol. 3, Issue 3
Measuring the dynamic photosynthome
journal, June 2018
- Murchie, Erik H.; Kefauver, Shawn; Araus, Jose Luis
- Annals of Botany, Vol. 122, Issue 2
Photosynthetic activity of reproductive organs
journal, March 2019
- Brazel, Ailbhe J.; Ó’Maoiléidigh, Diarmuid S.
- Journal of Experimental Botany, Vol. 70, Issue 6
Regulation by FurC in Anabaena Links the Oxidative Stress Response to Photosynthetic Metabolism
journal, May 2019
- Sevilla, Emma; Sarasa-Buisan, Cristina; Gonz�lez, Andr�s
- Plant and Cell Physiology, Vol. 60, Issue 8
Environmental controls on light inhibition of respiration and leaf and canopy daytime carbon exchange in a temperate deciduous forest
journal, September 2018
- Heskel, Mary A.; Tang, Jianwu
- Tree Physiology, Vol. 38, Issue 12
Is NPP proportional to GPP? Waring’s hypothesis 20 years on
journal, May 2019
- Collalti, A.; Prentice, I. C.
- Tree Physiology, Vol. 39, Issue 8
Repeatable, continuous and real‐time estimates of coupled nitrogenase activity and carbon exchange at the whole‐plant scale
journal, May 2019
- Bytnerowicz, Thomas A.; Min, Elizabeth; Griffin, Kevin L.
- Methods in Ecology and Evolution, Vol. 10, Issue 7
Towards physiologically meaningful water‐use efficiency estimates from eddy covariance data
journal, September 2017
- Knauer, Jürgen; Zaehle, Sönke; Medlyn, Belinda E.
- Global Change Biology, Vol. 24, Issue 2
Modelling carbon sources and sinks in terrestrial vegetation
journal, September 2018
- Fatichi, Simone; Pappas, Christoforos; Zscheischler, Jakob
- New Phytologist, Vol. 221, Issue 2
Identification and evolution of C4 photosynthetic pathway genes in plants
journal, March 2020
- Shi, Weiping; Yue, Linqi; Guo, Jiahui
- BMC Plant Biology, Vol. 20, Issue 1
Bigleaf—An R package for the calculation of physical and physiological ecosystem properties from eddy covariance data
journal, August 2018
- Knauer, Jürgen; El-Madany, Tarek S.; Zaehle, Sönke
- PLOS ONE, Vol. 13, Issue 8
Effects of ultraviolet radiation and nutrient level on the physiological response and organic matter release of the scleractinian coral Pocillopora damicornis following thermal stress
journal, October 2018
- Courtial, Lucile; Planas Bielsa, Victor; Houlbrèque, Fanny
- PLOS ONE, Vol. 13, Issue 10
MODIS vegetation products as proxies of photosynthetic potential along a gradient of
meteorologically and biologically driven ecosystem productivity
journal, January 2016
- Restrepo-Coupe, Natalia; Huete, Alfredo; Davies, Kevin
- Biogeosciences, Vol. 13, Issue 19
Impacts of droughts and extreme-temperature events on gross primary production and ecosystem respiration: a systematic assessment across ecosystems and climate zones
journal, January 2018
- von Buttlar, Jannis; Zscheischler, Jakob; Rammig, Anja
- Biogeosciences, Vol. 15, Issue 5
Impacts of droughts and extreme temperature events on gross primary production and ecosystem respiration: a systematic assessment across ecosystems and climate zones
text, January 2017
- Von Buttlar, Jannis; Zscheischler, Jakob; Rammig, Anja
- ETH Zurich