skip to main content

DOE PAGESDOE PAGES

Title: High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775T, a plant pathogen of French bean pods

We report that the Phaseolibacter flectens strain ATCC 12775T (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes study.
Authors:
 [1] ;  [1] ;  [2] ;  [3] ;  [3] ;  [3] ;  [4] ;  [4] ;  [5] ;  [3] ;  [6] ;  [7] ;  [8]
  1. Univ. of Haifa, Haifa (Israel)
  2. St. Petersburg State Univ., St. Petersburg (Russia); St. Petersburg Academic University, St. Petersburg (Russia)
  3. DOE Joint Genome Inst., Walnut Creek, CA (United States)
  4. Lawrence Berkeley National Lab. (LBNL), Berkeley, CA (United States)
  5. Leibniz Institute DSMZ, Braunschweig (Germany)
  6. Newcastle Univ., Newcastle upon Tyne (United Kingdom)
  7. DOE Joint Genome Inst., Walnut Creek, CA (United States); King Abdulaziz University, Jeddah (Saudi Arabia)
  8. Univ. of Haifa, Haifa (Israel); Univ. of Haifa, Oranim, Kiryat Tivon (Israel)
Publication Date:
OSTI Identifier:
1256944
Grant/Contract Number:
AC02-05CH11231; 1.38.253.2015; 1094/12
Type:
Accepted Manuscript
Journal Name:
Standards in Genomic Sciences
Additional Journal Information:
Journal Volume: 11; Journal Issue: 1; Journal ID: ISSN 1944-3277
Publisher:
BioMed Central
Research Org:
Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States)
Sponsoring Org:
USDOE Office of Science (SC)
Country of Publication:
United States
Language:
English
Subject:
Phaseolibacter flectens; Enterobacteriaceae; plant pathogen; French bean pod; Phaseolus vulgaris