Examples of Effective Data Sharing in Scientific Publishing
Abstract
Here, we present a perspective on an approach to data sharing in scientific publications we have been developing in our group. The essence of the approach is that data can be embedded in a human-readable and machine-addressable way within the traditional publishing environment. We show this by example for both computational and experimental data. We articulate a need for new authoring tools to facilitate data sharing, and we discuss the tools we have been developing for this purpose. With these tools, data generation, analysis, and manuscript preparation can be deeply integrated, resulting in easier and better data sharing in scientific publications.
- Authors:
-
- Department of Chemical Engineering, Carnegie Mellon University, 5000 Forbes Avenue, Pittsburgh, Pennsylvania 15213, United States
- Publication Date:
- Research Org.:
- Carnegie Mellon Univ., Pittsburgh, PA (United States)
- Sponsoring Org.:
- USDOE Office of Science (SC), Basic Energy Sciences (BES)
- OSTI Identifier:
- 1183810
- Alternate Identifier(s):
- OSTI ID: 1455204
- Grant/Contract Number:
- SC0004031
- Resource Type:
- Published Article
- Journal Name:
- ACS Catalysis
- Additional Journal Information:
- Journal Name: ACS Catalysis Journal Volume: 5 Journal Issue: 6; Journal ID: ISSN 2155-5435
- Publisher:
- American Chemical Society
- Country of Publication:
- United States
- Language:
- English
- Subject:
- 96 KNOWLEDGE MANAGEMENT AND PRESERVATION
Citation Formats
Kitchin, John R. Examples of Effective Data Sharing in Scientific Publishing. United States: N. p., 2015.
Web. doi:10.1021/acscatal.5b00538.
Kitchin, John R. Examples of Effective Data Sharing in Scientific Publishing. United States. https://doi.org/10.1021/acscatal.5b00538
Kitchin, John R. Fri .
"Examples of Effective Data Sharing in Scientific Publishing". United States. https://doi.org/10.1021/acscatal.5b00538.
@article{osti_1183810,
title = {Examples of Effective Data Sharing in Scientific Publishing},
author = {Kitchin, John R.},
abstractNote = {Here, we present a perspective on an approach to data sharing in scientific publications we have been developing in our group. The essence of the approach is that data can be embedded in a human-readable and machine-addressable way within the traditional publishing environment. We show this by example for both computational and experimental data. We articulate a need for new authoring tools to facilitate data sharing, and we discuss the tools we have been developing for this purpose. With these tools, data generation, analysis, and manuscript preparation can be deeply integrated, resulting in easier and better data sharing in scientific publications.},
doi = {10.1021/acscatal.5b00538},
journal = {ACS Catalysis},
number = 6,
volume = 5,
place = {United States},
year = {Fri May 29 00:00:00 EDT 2015},
month = {Fri May 29 00:00:00 EDT 2015}
}
Free Publicly Available Full Text
Publisher's Version of Record
https://doi.org/10.1021/acscatal.5b00538
https://doi.org/10.1021/acscatal.5b00538
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Cited by: 16 works
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Works referenced in this record:
Simulating Temperature Programmed Desorption of Oxygen on Pt(111) Using DFT Derived Coverage Dependent Desorption Barriers
journal, October 2013
- Miller, Spencer D.; Pushkarev, Vladimir V.; Gellman, Andrew J.
- Topics in Catalysis, Vol. 57, Issue 1-4
A data and code model for reproducible research and executable papers
journal, January 2011
- Hinsen, Konrad
- Procedia Computer Science, Vol. 4
Supporting Data For: A Linear Response, Dft+U Study Of Trends In The Oxygen Evolution Activity Of Transition Metal Rutile Dioxides
dataset, January 2014
- Xu, Zhongnan; Rossmeisl, Jan; Kitchin, John R.
- Zenodo
Effects of O 2 and SO 2 on the Capture Capacity of a Primary-Amine Based Polymeric CO 2 Sorbent
journal, July 2013
- Hallenbeck, Alexander P.; Kitchin, John R.
- Industrial & Engineering Chemistry Research, Vol. 52, Issue 31
A Multi-Language Computing Environment for Literate Programming and Reproducible Research
journal, January 2012
- Schulte, Eric; Davison, Dan; Dye, Thomas
- Journal of Statistical Software, Vol. 46, Issue 3
The conundrum of sharing research data
journal, April 2012
- Borgman, Christine L.
- Journal of the American Society for Information Science and Technology, Vol. 63, Issue 6
IPython: A System for Interactive Scientific Computing
journal, January 2007
- Perez, Fernando; Granger, Brian E.
- Computing in Science & Engineering, Vol. 9, Issue 3
Guest Editors' Introduction: Reproducible Research
journal, January 2009
- Fomel, Sergey; Claerbout, Jon F.
- Computing in Science & Engineering, Vol. 11, Issue 1
Relating the electronic structure and reactivity of the 3d transition metal monoxide surfaces
journal, July 2014
- Xu, Zhongnan; Kitchin, John R.
- Catalysis Communications, Vol. 52
Estimating Bulk-Composition-Dependent H 2 Adsorption Energies on Cu x Pd 1– x Alloy (111) Surfaces
journal, January 2015
- Boes, Jacob R.; Gumuslu, Gamze; Miller, James B.
- ACS Catalysis, Vol. 5, Issue 2
Probing the Coverage Dependence of Site and Adsorbate Configurational Correlations on (111) Surfaces of Late Transition Metals
journal, October 2014
- Xu, Zhongnan; Kitchin, John R.
- The Journal of Physical Chemistry C, Vol. 118, Issue 44
Effects of Concentration, Crystal Structure, Magnetism, and Electronic Structure Method on First-Principles Oxygen Vacancy Formation Energy Trends in Perovskites
journal, November 2014
- Curnan, Matthew T.; Kitchin, John R.
- The Journal of Physical Chemistry C, Vol. 118, Issue 49
An object-oriented scripting interface to a legacy electronic structure code
journal, January 2002
- Bahn, S. R.; Jacobsen, K. W.
- Computing in Science & Engineering, Vol. 4, Issue 3
Python for Scientists and Engineers
journal, March 2011
- Millman, K. Jarrod; Aivazis, Michael
- Computing in Science & Engineering, Vol. 13, Issue 2
Identifying Potential BO 2 Oxide Polymorphs for Epitaxial Growth Candidates
journal, February 2014
- Mehta, Prateek; Salvador, Paul A.; Kitchin, John R.
- ACS Applied Materials & Interfaces, Vol. 6, Issue 5
Active Documents with Org-Mode
journal, May 2011
- Schulte, Eric; Davison, Dan
- Computing in Science & Engineering, Vol. 13, Issue 3